BLASTX nr result

ID: Atractylodes22_contig00026388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00026388
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626920.1| GRF zinc finger containing protein [Medicago...    57   2e-06
ref|XP_003595157.1| GRF zinc finger containing protein [Medicago...    56   4e-06

>ref|XP_003626920.1| GRF zinc finger containing protein [Medicago truncatula]
           gi|355520942|gb|AET01396.1| GRF zinc finger containing
           protein [Medicago truncatula]
          Length = 116

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
 Frame = +1

Query: 202 LPQLKMVLCYCGAPTIVRTS*TTQNPGRRFYYCNE--MGLNCGFIGWFDPSMCPQALHII 375
           L  +  ++CYCG  + + TS T +NPGRRF+ C    +G  C F  W+DP +  +   II
Sbjct: 14  LNHITKLVCYCGVDSPLVTSWTDENPGRRFHGCGRYFVGRKCNFFRWYDPEVPDRQKKII 73

Query: 376 HELFRSKNQLEE 411
             L R  ++L++
Sbjct: 74  RALLRKNDELKK 85


>ref|XP_003595157.1| GRF zinc finger containing protein [Medicago truncatula]
           gi|355484205|gb|AES65408.1| GRF zinc finger containing
           protein [Medicago truncatula]
          Length = 106

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
 Frame = +1

Query: 220 VLCYCGAPTIVRTS*TTQNPGRRFYYCNE--MGLNCGFIGWFDPSMCPQALHIIHELFRS 393
           ++CYCG  + + TS T +NPGRRF+ C    +G  C F  W+DP +  +   II  L R 
Sbjct: 20  LVCYCGVDSPLVTSWTDENPGRRFHGCGRDFVGRKCNFFRWYDPEVPDRQKKIIRALLRK 79

Query: 394 KNQLEE 411
            ++L++
Sbjct: 80  NDELKK 85


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