BLASTX nr result

ID: Atractylodes22_contig00026328 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00026328
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537459.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    89   4e-16
ref|XP_004161919.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    86   3e-15
ref|XP_004147682.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    86   3e-15
ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    83   2e-14
emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera]    83   2e-14

>ref|XP_003537459.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
          Length = 393

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 48/72 (66%), Positives = 51/72 (70%), Gaps = 6/72 (8%)
 Frame = -2

Query: 199 MYMFGTNESSD------LRFRRRNTGDRSPFNPVIVLRGADEHSGDGDRGFELYYDDGAG 38
           MYM G   SSD      LR  RRN GDRSPFNPVIVLRG  E   D  RGFEL+YDDG G
Sbjct: 63  MYMIGQRPSSDPRPASSLRRTRRNGGDRSPFNPVIVLRGGAE---DESRGFELFYDDGTG 119

Query: 37  SGLQPLPPTMSE 2
           SGL+PLPP+MSE
Sbjct: 120 SGLRPLPPSMSE 131


>ref|XP_004161919.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 380

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 47/73 (64%), Positives = 51/73 (69%), Gaps = 7/73 (9%)
 Frame = -2

Query: 199 MYMFGT------NESSDLRFRRRNTGDRSPFNPVIVLRGADEHSGDGD-RGFELYYDDGA 41
           MYM G       N  S LR  RRN GDRSPFNPVIVLRG  + S  G+ R FELYYDDG 
Sbjct: 59  MYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDGG 118

Query: 40  GSGLQPLPPTMSE 2
           GSGL+PLPP+MSE
Sbjct: 119 GSGLRPLPPSMSE 131


>ref|XP_004147682.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 383

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 47/73 (64%), Positives = 51/73 (69%), Gaps = 7/73 (9%)
 Frame = -2

Query: 199 MYMFGT------NESSDLRFRRRNTGDRSPFNPVIVLRGADEHSGDGD-RGFELYYDDGA 41
           MYM G       N  S LR  RRN GDRSPFNPVIVLRG  + S  G+ R FELYYDDG 
Sbjct: 62  MYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDGG 121

Query: 40  GSGLQPLPPTMSE 2
           GSGL+PLPP+MSE
Sbjct: 122 GSGLRPLPPSMSE 134


>ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 388

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 48/78 (61%), Positives = 50/78 (64%), Gaps = 12/78 (15%)
 Frame = -2

Query: 199 MYMFGTNESSD-------LRFRRRNTGDRSPFNPVIVLRG-ADEHSGDGD----RGFELY 56
           MYM G N           LR  RRN GDRSPFNPVIVLRG AD   G+G       FELY
Sbjct: 57  MYMLGNNRPDSEQSANLGLRRSRRNAGDRSPFNPVIVLRGPADGGGGEGGVVERSSFELY 116

Query: 55  YDDGAGSGLQPLPPTMSE 2
           YDDGAGSGL+PLP TMSE
Sbjct: 117 YDDGAGSGLRPLPATMSE 134


>emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera]
          Length = 1218

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 48/78 (61%), Positives = 50/78 (64%), Gaps = 12/78 (15%)
 Frame = -2

Query: 199 MYMFGTNESSD-------LRFRRRNTGDRSPFNPVIVLRG-ADEHSGDGD----RGFELY 56
           MYM G N           LR  RRN GDRSPFNPVIVLRG AD   G+G       FELY
Sbjct: 167 MYMLGNNRPDSEQSANLGLRRSRRNAGDRSPFNPVIVLRGPADGGGGEGGVVERSSFELY 226

Query: 55  YDDGAGSGLQPLPPTMSE 2
           YDDGAGSGL+PLP TMSE
Sbjct: 227 YDDGAGSGLRPLPATMSE 244


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