BLASTX nr result

ID: Atractylodes22_contig00026250 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00026250
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306768.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_003554244.1| PREDICTED: F-box protein At2g27310-like [Gly...   106   2e-21
ref|XP_002302120.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
ref|XP_002272313.1| PREDICTED: F-box protein At2g27310-like [Vit...   105   4e-21
gb|AFK45770.1| unknown [Lotus japonicus]                              105   5e-21

>ref|XP_002306768.1| predicted protein [Populus trichocarpa] gi|222856217|gb|EEE93764.1|
           predicted protein [Populus trichocarpa]
          Length = 375

 Score =  107 bits (266), Expect = 1e-21
 Identities = 52/79 (65%), Positives = 61/79 (77%)
 Frame = -1

Query: 237 MSVAPVENMGTLSSDLFYDILKRLDGSTLXXXXXXXXXXXXXSKEERLWEDVCSSMWPST 58
           MSV PVEN  +LSSDLFYDIL+RLDG TL             SKEE+LW++VCSSMWPST
Sbjct: 3   MSVGPVENEASLSSDLFYDILRRLDGPTLASAACACAAFCSISKEEKLWDNVCSSMWPST 62

Query: 57  KRDDVKNLISSIGGFKKFY 1
            R+DV++LISSIGGF+KFY
Sbjct: 63  NREDVRSLISSIGGFRKFY 81


>ref|XP_003554244.1| PREDICTED: F-box protein At2g27310-like [Glycine max]
          Length = 375

 Score =  106 bits (265), Expect = 2e-21
 Identities = 52/79 (65%), Positives = 62/79 (78%)
 Frame = -1

Query: 237 MSVAPVENMGTLSSDLFYDILKRLDGSTLXXXXXXXXXXXXXSKEERLWEDVCSSMWPST 58
           MSVAPV+++ +LSSDLFYDI +RLDG+TL             SKEE LWE+VCSSMWPST
Sbjct: 1   MSVAPVDSIPSLSSDLFYDIFRRLDGATLASAACTCAALCSISKEENLWENVCSSMWPST 60

Query: 57  KRDDVKNLISSIGGFKKFY 1
            R+DVK+LISSIGGF+KFY
Sbjct: 61  NREDVKSLISSIGGFRKFY 79


>ref|XP_002302120.1| predicted protein [Populus trichocarpa] gi|222843846|gb|EEE81393.1|
           predicted protein [Populus trichocarpa]
          Length = 375

 Score =  106 bits (265), Expect = 2e-21
 Identities = 52/79 (65%), Positives = 62/79 (78%)
 Frame = -1

Query: 237 MSVAPVENMGTLSSDLFYDILKRLDGSTLXXXXXXXXXXXXXSKEERLWEDVCSSMWPST 58
           +SVAPVE+M +LSSDLFY+IL+RLDG TL             SKEE+LWE+VCSSMWPST
Sbjct: 3   VSVAPVESMASLSSDLFYEILRRLDGPTLASAACACVAFCSISKEEKLWENVCSSMWPST 62

Query: 57  KRDDVKNLISSIGGFKKFY 1
            R+DVK+LIS IGGF+KFY
Sbjct: 63  SREDVKSLISCIGGFRKFY 81


>ref|XP_002272313.1| PREDICTED: F-box protein At2g27310-like [Vitis vinifera]
          Length = 379

 Score =  105 bits (262), Expect = 4e-21
 Identities = 52/79 (65%), Positives = 61/79 (77%)
 Frame = -1

Query: 237 MSVAPVENMGTLSSDLFYDILKRLDGSTLXXXXXXXXXXXXXSKEERLWEDVCSSMWPST 58
           MSVA V++M  LSSD+FYDIL+RLDG TL             S+EERLWE+VCSSMWPST
Sbjct: 7   MSVAQVDSMAPLSSDIFYDILRRLDGLTLASAACACAAFCSISREERLWENVCSSMWPST 66

Query: 57  KRDDVKNLISSIGGFKKFY 1
            R+DVK+LISSIGGF+KFY
Sbjct: 67  NREDVKSLISSIGGFRKFY 85


>gb|AFK45770.1| unknown [Lotus japonicus]
          Length = 373

 Score =  105 bits (261), Expect = 5e-21
 Identities = 51/79 (64%), Positives = 61/79 (77%)
 Frame = -1

Query: 237 MSVAPVENMGTLSSDLFYDILKRLDGSTLXXXXXXXXXXXXXSKEERLWEDVCSSMWPST 58
           MSVAPVE++G+L+SD+FYDIL+RLDG  L             SKEE LWE+VCSS+WPST
Sbjct: 1   MSVAPVESIGSLNSDIFYDILRRLDGPELASVACTCAAFCSISKEESLWENVCSSVWPST 60

Query: 57  KRDDVKNLISSIGGFKKFY 1
            R+DVK LISSIGGF+KFY
Sbjct: 61  NREDVKTLISSIGGFRKFY 79


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