BLASTX nr result

ID: Atractylodes22_contig00026196 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00026196
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232...    70   2e-10
ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein A...    64   2e-08
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...    61   8e-08
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal...    59   3e-07

>ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232446, partial [Cucumis
           sativus]
          Length = 382

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 30/74 (40%), Positives = 45/74 (60%)
 Frame = +2

Query: 266 LLDKVKRRLNSWHNKRLSYAGRXXXXXXXXXXXXXYWASLFILPVVVHLEMEKLFRNFLW 445
           L+ ++  R+ SW  + LS+AGR             YWAS+F+LP+ VH +++K+ R++LW
Sbjct: 56  LIQRITSRIRSWSARVLSFAGRLQLVRSVLRSLQVYWASVFMLPMKVHRDVDKILRSYLW 115

Query: 446 NNGEVSRGSAKVAW 487
              E  RG AKVAW
Sbjct: 116 RGKEEGRGGAKVAW 129


>ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein At1g65750-like, partial
           [Cucumis sativus]
          Length = 647

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 28/74 (37%), Positives = 42/74 (56%)
 Frame = +2

Query: 266 LLDKVKRRLNSWHNKRLSYAGRXXXXXXXXXXXXXYWASLFILPVVVHLEMEKLFRNFLW 445
           L+  +  R+ SW  + LS+A               YWAS+F+LP+ VH +++K+ R++LW
Sbjct: 241 LIQCITSRIRSWSARVLSFASSLQLVRLVLRSLQVYWASVFMLPMKVHKDVDKILRSYLW 300

Query: 446 NNGEVSRGSAKVAW 487
              E  RG AKVAW
Sbjct: 301 RGKEEGRGGAKVAW 314


>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/74 (36%), Positives = 43/74 (58%)
 Frame = +2

Query: 266  LLDKVKRRLNSWHNKRLSYAGRXXXXXXXXXXXXXYWASLFILPVVVHLEMEKLFRNFLW 445
            L++K++ R+ SW N+ LS+AGR             +W S+F LP     E+EK+F  FLW
Sbjct: 936  LVEKIRARITSWTNRFLSFAGRLQLIKSVLSSITNFWLSVFRLPKACLQEIEKMFSAFLW 995

Query: 446  NNGEVSRGSAKVAW 487
            +  +++   AK+AW
Sbjct: 996  SGPDLNTKKAKIAW 1009


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/74 (36%), Positives = 42/74 (56%)
 Frame = +2

Query: 266 LLDKVKRRLNSWHNKRLSYAGRXXXXXXXXXXXXXYWASLFILPVVVHLEMEKLFRNFLW 445
           L+D++  ++  W  + LSYAGR             YWASLF+LP  V   +E++ ++FLW
Sbjct: 76  LVDRITSKVRHWTCRTLSYAGRVQLINSVLFSIQVYWASLFLLPGQVIKNVEQIMKSFLW 135

Query: 446 NNGEVSRGSAKVAW 487
           +  ++    AKVAW
Sbjct: 136 SGSDMRTTGAKVAW 149


>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|7267919|emb|CAB78261.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 662

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 29/74 (39%), Positives = 41/74 (55%)
 Frame = +2

Query: 266 LLDKVKRRLNSWHNKRLSYAGRXXXXXXXXXXXXXYWASLFILPVVVHLEMEKLFRNFLW 445
           LL+++KRR+ +W  + LSYAGR             +W S F LP     E++KL   FLW
Sbjct: 307 LLEQIKRRIGTWTARFLSYAGRLNLVSSVLWSICNFWLSAFRLPRECVREIDKLCSAFLW 366

Query: 446 NNGEVSRGSAKVAW 487
           +  E+S   AK+AW
Sbjct: 367 SGPELSTNKAKIAW 380


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