BLASTX nr result

ID: Atractylodes22_contig00026195 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00026195
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFA27689.1| ribulose-1,5-bisphosphate carboxylase/oxygenase l...    50   4e-11
emb|CAA76744.2| ribulose-1,5-bisphosphate carboxylase/oxygenase ...    45   9e-10
emb|CAB01106.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ...    45   9e-10
gb|ADJ18413.1| ribulose-1,5-bisphosphate carboxylase/oxygenase l...    44   3e-09
gb|AAC35087.1| ribulose-1,5-bisphosphate carboxylase/oxygenase [...    46   3e-08

>gb|AFA27689.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit,
           partial [Neoregelia carolinae]
          Length = 468

 Score = 49.7 bits (117), Expect(2) = 4e-11
 Identities = 22/29 (75%), Positives = 24/29 (82%)
 Frame = +3

Query: 279 FPANSSLAHYCQDNGPLLHTTIQCMQLLI 365
           F AN+SLAHYC+DNG LLH   QCMQLLI
Sbjct: 281 FTANTSLAHYCRDNGLLLHIIAQCMQLLI 309



 Score = 42.7 bits (99), Expect(2) = 4e-11
 Identities = 18/27 (66%), Positives = 23/27 (85%)
 Frame = +2

Query: 194 QKMMKRRVFARKLRVPVAMHDYLTEGF 274
           ++M+KR VFAR+L VP+ MHDYLT GF
Sbjct: 255 EEMIKRAVFARELGVPIVMHDYLTGGF 281


>emb|CAA76744.2| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
           [Conanthera trimaculata]
          Length = 486

 Score = 45.1 bits (105), Expect(2) = 9e-10
 Identities = 19/28 (67%), Positives = 23/28 (82%)
 Frame = +3

Query: 279 FPANSSLAHYCQDNGPLLHTTIQCMQLL 362
           F AN+SLAHYC+DNG LLH   QCMQ++
Sbjct: 274 FTANTSLAHYCRDNGLLLHIHRQCMQVI 301



 Score = 42.7 bits (99), Expect(2) = 9e-10
 Identities = 18/27 (66%), Positives = 23/27 (85%)
 Frame = +2

Query: 194 QKMMKRRVFARKLRVPVAMHDYLTEGF 274
           ++M+KR VFAR+L VP+ MHDYLT GF
Sbjct: 248 EEMIKRAVFARELGVPIVMHDYLTGGF 274


>emb|CAB01106.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
           [Conanthera campanulata]
          Length = 444

 Score = 45.1 bits (105), Expect(2) = 9e-10
 Identities = 19/28 (67%), Positives = 23/28 (82%)
 Frame = +3

Query: 279 FPANSSLAHYCQDNGPLLHTTIQCMQLL 362
           F AN+SLAHYC+DNG LLH   QCMQ++
Sbjct: 267 FTANTSLAHYCRDNGLLLHIHRQCMQVI 294



 Score = 42.7 bits (99), Expect(2) = 9e-10
 Identities = 18/27 (66%), Positives = 23/27 (85%)
 Frame = +2

Query: 194 QKMMKRRVFARKLRVPVAMHDYLTEGF 274
           ++M+KR VFAR+L VP+ MHDYLT GF
Sbjct: 241 EEMIKRAVFARELGVPIVMHDYLTGGF 267


>gb|ADJ18413.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
           [Suaeda prostrata]
          Length = 285

 Score = 43.5 bits (101), Expect(2) = 3e-09
 Identities = 19/27 (70%), Positives = 22/27 (81%)
 Frame = +2

Query: 194 QKMMKRRVFARKLRVPVAMHDYLTEGF 274
           + MMKR VFAR+L VP+ MHDYLT GF
Sbjct: 227 EDMMKRAVFARELGVPIVMHDYLTGGF 253



 Score = 42.7 bits (99), Expect(2) = 3e-09
 Identities = 18/29 (62%), Positives = 23/29 (79%)
 Frame = +3

Query: 279 FPANSSLAHYCQDNGPLLHTTIQCMQLLI 365
           F AN++LAHYC+DN     +T+QCMQLLI
Sbjct: 253 FTANTTLAHYCRDNVYFFTSTVQCMQLLI 281


>gb|AAC35087.1| ribulose-1,5-bisphosphate carboxylase/oxygenase [Galeandra
           devoniana]
          Length = 447

 Score = 45.8 bits (107), Expect(2) = 3e-08
 Identities = 20/27 (74%), Positives = 24/27 (88%)
 Frame = +2

Query: 194 QKMMKRRVFARKLRVPVAMHDYLTEGF 274
           ++MMKR VFAR+L VP+AMHDYLT GF
Sbjct: 239 EEMMKRAVFARELGVPIAMHDYLTGGF 265



 Score = 37.0 bits (84), Expect(2) = 3e-08
 Identities = 15/19 (78%), Positives = 17/19 (89%)
 Frame = +3

Query: 279 FPANSSLAHYCQDNGPLLH 335
           F AN+SLAHYC+DNG LLH
Sbjct: 265 FTANTSLAHYCRDNGLLLH 283


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