BLASTX nr result

ID: Atractylodes22_contig00026165 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00026165
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002883605.1| predicted protein [Arabidopsis lyrata subsp....   194   5e-48
ref|XP_002321239.1| predicted protein [Populus trichocarpa] gi|2...   192   2e-47
ref|NP_189170.1| Poly(A)-specific ribonuclease PARN-like protein...   190   1e-46
dbj|BAB01314.1| unnamed protein product [Arabidopsis thaliana]        190   1e-46
ref|XP_002326981.1| predicted protein [Populus trichocarpa] gi|2...   188   3e-46

>ref|XP_002883605.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297329445|gb|EFH59864.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1055

 Score =  194 bits (494), Expect = 5e-48
 Identities = 98/152 (64%), Positives = 121/152 (79%), Gaps = 1/152 (0%)
 Frame = +2

Query: 2   LKAKYAAERFQILQFAVCPFSIRASNKLIAHPFNFHLFPRDELKIGMPCYSFSCQPSYLT 181
           LKAKYAAER+QILQFA+CPFS+  S KL  HP+NFHLFPRDELK GMP YSFSCQ S LT
Sbjct: 79  LKAKYAAERYQILQFALCPFSLHGS-KLTVHPYNFHLFPRDELKCGMPSYSFSCQASRLT 137

Query: 182 SMAREDFDFNVCIYDGISYLSRAQESAAKGQIGNPVSSGHVAQTTPSPRSVADNVFVERI 361
           +MARE FDFN CIY+GISYLSRAQESA+K   GNP+ + H+   + SP +VAD VFV RI
Sbjct: 138 AMAREGFDFNTCIYEGISYLSRAQESASKFLSGNPILADHIT-VSSSPATVADTVFVGRI 196

Query: 362 KARIGHWISACKHSNTRS-DDALVNSLRKLIL 454
           ++R+ +W  +C  S +++ DD LV+SLR+L+L
Sbjct: 197 RSRVKNWRQSCIDSGSKTGDDDLVSSLRRLVL 228


>ref|XP_002321239.1| predicted protein [Populus trichocarpa] gi|222862012|gb|EEE99554.1|
           predicted protein [Populus trichocarpa]
          Length = 628

 Score =  192 bits (488), Expect = 2e-47
 Identities = 102/156 (65%), Positives = 123/156 (78%), Gaps = 5/156 (3%)
 Frame = +2

Query: 2   LKAKYAAERFQILQFAVCPFSIRASNKLIAHPFNFHLFPRDELKIGMPCYSFSCQPSYLT 181
           LKAKYAAERFQ+L FAVCPF++RAS K+ A+P+NFHLFPR ELK+ MP YSF CQ S L 
Sbjct: 83  LKAKYAAERFQVLHFAVCPFTVRAS-KVTAYPYNFHLFPRAELKMEMPSYSFYCQTSSLI 141

Query: 182 SMAREDFDFNVCIYDGISYLSRAQESAAKGQIGNPVSSGHVAQTTPSPRSVADNVFVERI 361
           SMAR+ FDFN CI DGISYLSR QESAAK Q+GNP+ + +V ++T S  SVAD+VFVERI
Sbjct: 142 SMARQGFDFNSCINDGISYLSREQESAAKIQMGNPILAKNVTEST-STLSVADSVFVERI 200

Query: 362 KARIGHWISACKHSNTRSD-----DALVNSLRKLIL 454
           K+ I +W  ACK ++TR +     DALV SLRKL+L
Sbjct: 201 KSHIKNWKKACKETSTRKEGNQIQDALVRSLRKLVL 236


>ref|NP_189170.1| Poly(A)-specific ribonuclease PARN-like protein [Arabidopsis
           thaliana] gi|75162449|sp|Q8W4C3.1|PARNL_ARATH RecName:
           Full=Poly(A)-specific ribonuclease PARN-like; AltName:
           Full=Polyadenylate-specific ribonuclease-like protein
           gi|17065176|gb|AAL32742.1| Unknown protein [Arabidopsis
           thaliana] gi|30725444|gb|AAP37744.1| At3g25430
           [Arabidopsis thaliana] gi|332643489|gb|AEE77010.1|
           Poly(A)-specific ribonuclease PARN-like protein
           [Arabidopsis thaliana]
          Length = 618

 Score =  190 bits (482), Expect = 1e-46
 Identities = 97/152 (63%), Positives = 121/152 (79%), Gaps = 1/152 (0%)
 Frame = +2

Query: 2   LKAKYAAERFQILQFAVCPFSIRASNKLIAHPFNFHLFPRDELKIGMPCYSFSCQPSYLT 181
           LKAKYAAER+QILQFA+CPFS++ S KL  HP+NFHLFPRDELK GMP YSFSCQ S LT
Sbjct: 79  LKAKYAAERYQILQFALCPFSLQGS-KLTVHPYNFHLFPRDELKCGMPSYSFSCQASRLT 137

Query: 182 SMAREDFDFNVCIYDGISYLSRAQESAAKGQIGNPVSSGHVAQTTPSPRSVADNVFVERI 361
           +MARE FDFN+CIY+GISYLSRAQESA+K    NP+ +  V   + SP +VAD VFV RI
Sbjct: 138 AMAREGFDFNICIYEGISYLSRAQESASKFLSENPILADSVT-VSSSPATVADTVFVGRI 196

Query: 362 KARIGHWISACKHSNTRS-DDALVNSLRKLIL 454
           ++R+ +W  +C  S +++ DD LV+SLR+L+L
Sbjct: 197 RSRVKNWRQSCIDSGSKTGDDDLVSSLRRLVL 228


>dbj|BAB01314.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1115

 Score =  190 bits (482), Expect = 1e-46
 Identities = 97/152 (63%), Positives = 121/152 (79%), Gaps = 1/152 (0%)
 Frame = +2

Query: 2   LKAKYAAERFQILQFAVCPFSIRASNKLIAHPFNFHLFPRDELKIGMPCYSFSCQPSYLT 181
           LKAKYAAER+QILQFA+CPFS++ S KL  HP+NFHLFPRDELK GMP YSFSCQ S LT
Sbjct: 79  LKAKYAAERYQILQFALCPFSLQGS-KLTVHPYNFHLFPRDELKCGMPSYSFSCQASRLT 137

Query: 182 SMAREDFDFNVCIYDGISYLSRAQESAAKGQIGNPVSSGHVAQTTPSPRSVADNVFVERI 361
           +MARE FDFN+CIY+GISYLSRAQESA+K    NP+ +  V   + SP +VAD VFV RI
Sbjct: 138 AMAREGFDFNICIYEGISYLSRAQESASKFLSENPILADSVT-VSSSPATVADTVFVGRI 196

Query: 362 KARIGHWISACKHSNTRS-DDALVNSLRKLIL 454
           ++R+ +W  +C  S +++ DD LV+SLR+L+L
Sbjct: 197 RSRVKNWRQSCIDSGSKTGDDDLVSSLRRLVL 228


>ref|XP_002326981.1| predicted protein [Populus trichocarpa] gi|222835296|gb|EEE73731.1|
           predicted protein [Populus trichocarpa]
          Length = 626

 Score =  188 bits (478), Expect = 3e-46
 Identities = 100/156 (64%), Positives = 121/156 (77%), Gaps = 5/156 (3%)
 Frame = +2

Query: 2   LKAKYAAERFQILQFAVCPFSIRASNKLIAHPFNFHLFPRDELKIGMPCYSFSCQPSYLT 181
           LKAKYAAERFQ+L FAVCP ++RAS K+ A+P+NFHLFPR ELK+ MP YSF CQ S L 
Sbjct: 83  LKAKYAAERFQVLHFAVCPITVRAS-KVTAYPYNFHLFPRAELKMEMPSYSFYCQTSSLI 141

Query: 182 SMAREDFDFNVCIYDGISYLSRAQESAAKGQIGNPVSSGHVAQTTPSPRSVADNVFVERI 361
           SMAR+ FDFN CI DGISYLSR QES AK Q+GNP+ + +V ++T S  SVAD+VFVERI
Sbjct: 142 SMARQGFDFNSCINDGISYLSREQESTAKIQMGNPILAKNVTEST-STLSVADSVFVERI 200

Query: 362 KARIGHWISACKHSNTRSD-----DALVNSLRKLIL 454
           K+ I +W  ACK ++TR +     DALV SLRKL+L
Sbjct: 201 KSHIKNWKKACKETSTRKEGNQIQDALVRSLRKLVL 236


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