BLASTX nr result

ID: Atractylodes22_contig00026028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00026028
         (845 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307819.1| predicted protein [Populus trichocarpa] gi|2...   293   3e-77
ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258...   292   7e-77
ref|XP_003522980.1| PREDICTED: RNA-binding protein 24-like [Glyc...   291   2e-76
ref|XP_002300621.1| predicted protein [Populus trichocarpa] gi|2...   288   8e-76
ref|XP_003527630.1| PREDICTED: 40S ribosomal protein S19, mitoch...   287   2e-75

>ref|XP_002307819.1| predicted protein [Populus trichocarpa] gi|222857268|gb|EEE94815.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score =  293 bits (751), Expect = 3e-77
 Identities = 147/256 (57%), Positives = 178/256 (69%), Gaps = 8/256 (3%)
 Frame = -1

Query: 749 AYQPIRG------NGPGLQFLNFPFGDTTHTKVFVGGLAWETHSETLHHYFDQFGDILEA 588
           AYQ I G      +  G Q++N PFGDTT+TKVFVGGLAWET SET+  YF+QFGDILEA
Sbjct: 2   AYQAIPGPSSGSSSSSGFQYMNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGDILEA 61

Query: 587 VVITDKHTGRSKGYGFVTFHDAEAAKRACADPTPVIDGRRANCNLASLGRAQPSLTYGLL 408
           VVITDK+TGRSKGYGFVTF + +AA+RACADPTP+IDGRRANCNLASLGR +P L YG  
Sbjct: 62  VVITDKNTGRSKGYGFVTFREPDAARRACADPTPIIDGRRANCNLASLGRPRPPLPYGRP 121

Query: 407 RPAGHYFWSSQNPGGPFVGSSSYRQSVPYGYQQ-YPYSLYGYPAYGPEYVFPQVPYNPYA 231
           RPA  Y  S Q P G +VGS  Y+Q V YGYQQ   Y+ YGY AYGPEYV+ Q  YNPYA
Sbjct: 122 RPAAPYITSVQTPRGTYVGSFGYQQPVSYGYQQGLMYNPYGYAAYGPEYVYQQGAYNPYA 181

Query: 230 -GQHHPQMLGLPGVVNPNAFSYGQMXXXXXXXXGYRAIQGMVTPGPNVLPYGRPNLSGAT 54
            G  + Q+ G+PG VN   + YGQ+        GY ++ G   PG  ++ +G P+++  T
Sbjct: 182 TGHQYLQIYGVPGTVNSGMYPYGQLSQNVPGGHGYTSMPGYAVPGHQIVQFGGPSVNAIT 241

Query: 53  TDIVPMPPTPYLTGVA 6
           T  +P    PY TG+A
Sbjct: 242 TSSMPTIQAPYHTGIA 257


>ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258188 [Vitis vinifera]
          Length = 346

 Score =  292 bits (747), Expect = 7e-77
 Identities = 144/255 (56%), Positives = 175/255 (68%), Gaps = 7/255 (2%)
 Frame = -1

Query: 749 AYQPIRG------NGPGLQFLNFPFGDTTHTKVFVGGLAWETHSETLHHYFDQFGDILEA 588
           AYQPI G      +  G QFLN PFGDTT+TKVFVGGLAWET SET+  YF+QFG+ILEA
Sbjct: 2   AYQPIPGPSSGSSSSSGFQFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEA 61

Query: 587 VVITDKHTGRSKGYGFVTFHDAEAAKRACADPTPVIDGRRANCNLASLGRAQPSLTYGLL 408
           VVITDK+TGRSKGYGFVTF D E+A+RAC DP P+IDGRRANCNLASLGR +PS++YG L
Sbjct: 62  VVITDKNTGRSKGYGFVTFRDPESARRACLDPAPIIDGRRANCNLASLGRPRPSMSYGRL 121

Query: 407 RPAGHYFWSSQNPGGPFVGSSSYRQSVPYGYQQ-YPYSLYGYPAYGPEYVFPQVPYNPYA 231
           RP   Y  S     G +VG+  Y+Q V Y YQQ + Y  YGY AYGPEYV+PQ  YNPY 
Sbjct: 122 RPVTPYLGSVPATRGSYVGNFGYQQPVSYSYQQGFMYPSYGYAAYGPEYVYPQGVYNPYP 181

Query: 230 GQHHPQMLGLPGVVNPNAFSYGQMXXXXXXXXGYRAIQGMVTPGPNVLPYGRPNLSGATT 51
           GQ + Q+ G+PG VN   + YGQ+        GY  +QG   PG   + +G  +++  +T
Sbjct: 182 GQQYLQIYGVPGTVNTAIYPYGQLGQTLPSSHGYTTVQGYAMPGHQFMQFGGSSVNAIST 241

Query: 50  DIVPMPPTPYLTGVA 6
             +P    PY TG+A
Sbjct: 242 SPIPTIQAPYPTGIA 256


>ref|XP_003522980.1| PREDICTED: RNA-binding protein 24-like [Glycine max]
          Length = 286

 Score =  291 bits (744), Expect = 2e-76
 Identities = 147/256 (57%), Positives = 176/256 (68%), Gaps = 8/256 (3%)
 Frame = -1

Query: 749 AYQPIRG------NGPGLQFLNFPFGDTTHTKVFVGGLAWETHSETLHHYFDQFGDILEA 588
           AYQ ++G      +  G Q LN PFGDTT+TKVFVGGLAWET SET+  YFDQFG+ILEA
Sbjct: 2   AYQAMQGPSSGSSSSSGFQLLNSPFGDTTYTKVFVGGLAWETQSETMRRYFDQFGEILEA 61

Query: 587 VVITDKHTGRSKGYGFVTFHDAEAAKRACADPTPVIDGRRANCNLASLGRAQPSLTYGLL 408
           VVITDK+TGRSKGYGFVTF D EAA+RACADP+PVIDGRRANCNLASLGR +P L YG +
Sbjct: 62  VVITDKNTGRSKGYGFVTFRDPEAARRACADPSPVIDGRRANCNLASLGRPRPPLPYGRI 121

Query: 407 RPAGHYFWSSQNPGGPFVGSSSYRQSVPYGYQQ-YPYSLYGYPAYGPEYVFPQVPYNPYA 231
           RPA  Y  S Q   G +VG   Y+Q V Y YQQ   Y  YGY +YGPEY++PQ  YNPY 
Sbjct: 122 RPASPYVGSLQPARGAYVGGFGYQQPVSYSYQQGLVYPPYGYTSYGPEYIYPQSLYNPYM 181

Query: 230 GQHHPQMLGLPGVVNPNA-FSYGQMXXXXXXXXGYRAIQGMVTPGPNVLPYGRPNLSGAT 54
           GQ + Q+ G+PG VN    + YGQ+        GY A+QG   PG  ++PYG  N++  T
Sbjct: 182 GQQYLQIYGVPGAVNTTTIYPYGQVGQAITSGHGYSAMQGYTVPGHQIVPYGGSNVNAIT 241

Query: 53  TDIVPMPPTPYLTGVA 6
           T  +P     Y +G+A
Sbjct: 242 TSPMPAIQASYPSGIA 257


>ref|XP_002300621.1| predicted protein [Populus trichocarpa] gi|222842347|gb|EEE79894.1|
           predicted protein [Populus trichocarpa]
          Length = 287

 Score =  288 bits (738), Expect = 8e-76
 Identities = 148/257 (57%), Positives = 176/257 (68%), Gaps = 9/257 (3%)
 Frame = -1

Query: 749 AYQPIRG------NGPGLQFLNFPFGDTTHTKVFVGGLAWETHSETLHHYFDQFGDILEA 588
           AYQ + G      +  G Q++N PFGDTT+TKVFVGGLAWET SET+  YF+QFGDILEA
Sbjct: 2   AYQAVPGPSSGSSSSSGFQYMNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGDILEA 61

Query: 587 VVITDKHTGRSKGYGFVTFHDAEAAKRACADPTPVIDGRRANCNLASLGRAQPSLTY-GL 411
           VVITDK+TGRSKGYGFVTF + EAA+RACADPTP+IDGRRANCNLASLGR +P   Y G 
Sbjct: 62  VVITDKNTGRSKGYGFVTFREPEAARRACADPTPMIDGRRANCNLASLGRPRPPQPYVGR 121

Query: 410 LRPAGHYFWSSQNPGGPFVGSSSYRQSVPYGYQQ-YPYSLYGYPAYGPEYVFPQVPYNPY 234
           LRPA  Y  S Q P G + GS  Y+Q V YGYQQ   Y  YGY AYGPEYV+ Q  YNPY
Sbjct: 122 LRPAPPYIASVQTPRGTYAGSFGYQQPVSYGYQQGLMYHPYGYAAYGPEYVYQQGVYNPY 181

Query: 233 -AGQHHPQMLGLPGVVNPNAFSYGQMXXXXXXXXGYRAIQGMVTPGPNVLPYGRPNLSGA 57
            AGQ + Q+ G+PG VN   + YGQ         GY  +QG   PG +++ +G P ++  
Sbjct: 182 AAGQQYLQIYGVPGTVNTGMYPYGQFGQNVPGGHGYTTMQGYAVPGHHIMQFGGPGVNAM 241

Query: 56  TTDIVPMPPTPYLTGVA 6
           TT  +P    PY TG+A
Sbjct: 242 TTSPLPTIQAPYPTGIA 258


>ref|XP_003527630.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like [Glycine
           max]
          Length = 293

 Score =  287 bits (734), Expect = 2e-75
 Identities = 149/263 (56%), Positives = 175/263 (66%), Gaps = 15/263 (5%)
 Frame = -1

Query: 749 AYQPIR------GNGPGLQFLNFPFGDTTHTKVFVGGLAWETHSETLHHYFDQFGDILEA 588
           AYQ I+       +  G Q LN PFGDTT+TKVFVGGLAWET SET+  YFDQFG+ILEA
Sbjct: 2   AYQAIQVPSSGSSSSSGFQLLNSPFGDTTYTKVFVGGLAWETQSETMRRYFDQFGEILEA 61

Query: 587 VVITDKHTGRSKGYGFVTFHDAEAAKRACADPTPVIDGRRANCNLASLGRAQPSLTYGL- 411
           VVITDK+TGRSKGYGFVTF D EAA+RACADPTPVIDGRRANCNLASLGR +P L YG+ 
Sbjct: 62  VVITDKNTGRSKGYGFVTFRDPEAARRACADPTPVIDGRRANCNLASLGRPRPPLPYGIV 121

Query: 410 ------LRPAGHYFWSSQNPGGPFVGSSSYRQS-VPYGYQQ-YPYSLYGYPAYGPEYVFP 255
                 +RPA  Y  S Q   G +VG   Y+Q  V Y YQQ   Y  YGY  YGPEY++P
Sbjct: 122 LCLIRRIRPASPYVGSLQPARGAYVGGFGYQQQPVSYSYQQGLVYPPYGYTTYGPEYIYP 181

Query: 254 QVPYNPYAGQHHPQMLGLPGVVNPNAFSYGQMXXXXXXXXGYRAIQGMVTPGPNVLPYGR 75
           Q  YNPY GQ + Q+ G+PG VN   + YGQ+        GY AIQG   PG  ++PYG 
Sbjct: 182 QSLYNPYMGQQYLQIYGVPGAVNTTVYPYGQVGQAIPSGHGYSAIQGYTVPGHQIVPYGG 241

Query: 74  PNLSGATTDIVPMPPTPYLTGVA 6
            N++  TT  +P     Y +G+A
Sbjct: 242 SNVNAITTSPMPAIQASYPSGIA 264


Top