BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00025946
         (2302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containi...   721   0.0  
ref|XP_002310520.1| predicted protein [Populus trichocarpa] gi|2...   711   0.0  
ref|XP_003602631.1| Pentatricopeptide repeat-containing protein ...   708   0.0  
ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containi...   705   0.0  
ref|XP_002883803.1| pentatricopeptide repeat-containing protein ...   684   0.0  

>ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
            [Vitis vinifera]
          Length = 684

 Score =  721 bits (1861), Expect = 0.0
 Identities = 341/480 (71%), Positives = 412/480 (85%)
 Frame = -2

Query: 2301 KVFDGMSQRNVVSWNSLITCYEQNGPACEALDIFMKMMNSGIEPDEVTLASMISACASLS 2122
            +VF GM +RN+V+WNSLITCYEQNGPA EAL++F++MM+SG+EPDEVTLAS++SACASL 
Sbjct: 203  EVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLC 262

Query: 2121 KLNVGREIHSRVMKFNKLRDDLVICNALVDMYAKCSRIVEARWIFDTMPLKNIITETSII 1942
             L  G +IH+RV+K NK RDDLV+ NALVDMYAKCS++ EAR +FD M ++N+++ETS++
Sbjct: 263  ALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMV 322

Query: 1941 SGYAKAANVETARSMFVNMTERNIVSWNALIAGYTQNGDNEVALGLFRQLKRDGVFPTHY 1762
            SGYA+AA+V+ AR MF  MT+RN+VSWNALIAGYTQNG+NE AL LFR LKR+ ++PTHY
Sbjct: 323  SGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHY 382

Query: 1761 TFGNLLSACANLADLRLGQQAHTHVLKHGFRFESGPESDIFVGNSLIDMYVKCGSIEDGT 1582
            TFGNLLSACANLADL LG+QAHTHVLK GF F+SG ESDIFVGNSLIDMY+KCGSIEDG+
Sbjct: 383  TFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGS 442

Query: 1581 RAFRNMTHRDWVSWNAIIVGFAQNGYGTETLELFKEMLASGEKPDHVTMIGLLSACSHAG 1402
            R F  M  RD VSWNAIIVG+AQNGYG E L++F++ML  GEKPDHVTMIG+L ACSHAG
Sbjct: 443  RVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAG 502

Query: 1401 LVEEGRHHFYSMSKEHGIEPMTDHYACMVDLLGRAGCLDEAKDLIETMPIQPDAVVWASL 1222
            LVEEGRH+F+SM +EHG+ P+ DHY CMVDLLGRAGCL+EAK+LIE MP+ PDAVVW SL
Sbjct: 503  LVEEGRHYFFSM-EEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSL 561

Query: 1221 LGACKVHRNIELGKYVAEKLIEIDSNNSGPYVLLSNMYAEQGNWGDVKRVRKLMKQRGVI 1042
            L ACKVH NIE+GK+ AEKL+EID  NSGPYVLLSNMYAE G WGDV RVRKLM+Q+GV 
Sbjct: 562  LAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVT 621

Query: 1041 KQPGCSWIEVDGKVHVFMVKDRRQPQKKEIYMLLRTLCKVMNLFGYVPNAHDLEANEEGS 862
            KQPGCSWIEV+ +VHVF+VKD+  P +K+IY +L+ L + M   GY+P+A+D EA +E S
Sbjct: 622  KQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMKRVGYIPDANDFEAYDEQS 681



 Score =  186 bits (471), Expect = 3e-44
 Identities = 108/376 (28%), Positives = 198/376 (52%)
 Frame = -2

Query: 2172 PDEVTLASMISACASLSKLNVGREIHSRVMKFNKLRDDLVICNALVDMYAKCSRIVEARW 1993
            P+    A ++ +C         R +H+R++   +   ++ I N L+D+Y KC  + +AR 
Sbjct: 13   PNSSPFAKLLDSCLRSRSARGTRLVHARIL-MTQFSMEIFIQNRLIDVYGKCDCLDDARK 71

Query: 1992 IFDTMPLKNIITETSIISGYAKAANVETARSMFVNMTERNIVSWNALIAGYTQNGDNEVA 1813
            +FD MP +N  T  S+IS   K+  ++ A  +F +M E +  SWN++++G+ Q+   E +
Sbjct: 72   LFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEES 131

Query: 1812 LGLFRQLKRDGVFPTHYTFGNLLSACANLADLRLGQQAHTHVLKHGFRFESGPESDIFVG 1633
            L  F ++ R+      Y+FG+ LSACA L DL +G Q H  V K  +       +D+++G
Sbjct: 132  LEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRY------STDVYMG 185

Query: 1632 NSLIDMYVKCGSIEDGTRAFRNMTHRDWVSWNAIIVGFAQNGYGTETLELFKEMLASGEK 1453
            ++LIDMY KCGS+      F  M  R+ V+WN++I  + QNG  +E LE+F  M+ SG +
Sbjct: 186  SALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLE 245

Query: 1452 PDHVTMIGLLSACSHAGLVEEGRHHFYSMSKEHGIEPMTDHYACMVDLLGRAGCLDEAKD 1273
            PD VT+  ++SAC+    ++EG      + K +           +VD+  +   ++EA+ 
Sbjct: 246  PDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARR 305

Query: 1272 LIETMPIQPDAVVWASLLGACKVHRNIELGKYVAEKLIEIDSNNSGPYVLLSNMYAEQGN 1093
            + + M I+ + V   S++       +++  +++  K+ +    N   +  L   Y + G 
Sbjct: 306  VFDRMSIR-NVVSETSMVSGYARAASVKAARFMFSKMTQ---RNVVSWNALIAGYTQNGE 361

Query: 1092 WGDVKRVRKLMKQRGV 1045
              +  R+ +L+K+  +
Sbjct: 362  NEEALRLFRLLKRESI 377



 Score =  154 bits (389), Expect = 1e-34
 Identities = 120/429 (27%), Positives = 188/429 (43%), Gaps = 68/429 (15%)
 Frame = -2

Query: 2301 KVFDGMSQRNVVSWNSLITCYEQNG---------------PAC----------------E 2215
            K+FD M QRN  +WNSLI+   ++G                 C                E
Sbjct: 71   KLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEE 130

Query: 2214 ALDIFMKMMNSGIEPDEVTLASMISACASLSKLNVGREIHSRVMKFNKLRDDLVICNALV 2035
            +L+ F+KM       +E +  S +SACA L  LN+G ++H+ V K ++   D+ + +AL+
Sbjct: 131  SLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSK-SRYSTDVYMGSALI 189

Query: 2034 DMYAKCSRIVEARWIFDTMPLKNIITETSIISGYAKAANVETARSMFVNMTERNIVSWNA 1855
            DMY+KC  +  A  +F  M  +N++T  S+I+                            
Sbjct: 190  DMYSKCGSVACAEEVFSGMIERNLVTWNSLIT---------------------------- 221

Query: 1854 LIAGYTQNGDNEVALGLFRQLKRDGVFPTHYTFGNLLSACANLADLRLGQQAHTHVLK-H 1678
                Y QNG    AL +F ++   G+ P   T  +++SACA+L  L+ G Q H  V+K +
Sbjct: 222  ---CYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTN 278

Query: 1677 GFRFESGPESDIFVGNSLIDMYVKCGSIEDGTRAF-----RN------------------ 1567
             FR       D+ +GN+L+DMY KC  + +  R F     RN                  
Sbjct: 279  KFR------DDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVK 332

Query: 1566 --------MTHRDWVSWNAIIVGFAQNGYGTETLELFKEMLASGEKPDHVTMIGLLSACS 1411
                    MT R+ VSWNA+I G+ QNG   E L LF+ +      P H T   LLSAC+
Sbjct: 333  AARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACA 392

Query: 1410 HAGLVEEGRH---HFYSMSKEHGIEPMTDHYA--CMVDLLGRAGCLDEAKDLIETMPIQP 1246
            +   +  GR    H      E      +D +    ++D+  + G +++   + E M  + 
Sbjct: 393  NLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMK-ER 451

Query: 1245 DAVVWASLL 1219
            D V W +++
Sbjct: 452  DCVSWNAII 460


>ref|XP_002310520.1| predicted protein [Populus trichocarpa] gi|222853423|gb|EEE90970.1|
            predicted protein [Populus trichocarpa]
          Length = 710

 Score =  711 bits (1834), Expect = 0.0
 Identities = 337/486 (69%), Positives = 408/486 (83%)
 Frame = -2

Query: 2301 KVFDGMSQRNVVSWNSLITCYEQNGPACEALDIFMKMMNSGIEPDEVTLASMISACASLS 2122
            +VFDGM ++NVVSWN LITCYEQNGPA EAL+ F +M   G +PDEVTLAS++SACA+L+
Sbjct: 212  RVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACATLA 271

Query: 2121 KLNVGREIHSRVMKFNKLRDDLVICNALVDMYAKCSRIVEARWIFDTMPLKNIITETSII 1942
                G +IH+RV+K +K R+DL++ NALVDMYAKC R+ EAR +FD MP++N ++ET+++
Sbjct: 272  AFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETTMV 331

Query: 1941 SGYAKAANVETARSMFVNMTERNIVSWNALIAGYTQNGDNEVALGLFRQLKRDGVFPTHY 1762
            SGYAK+A+V+ ARSMF  + +++IVSWNALIAGYTQNG+NE ALGLFR LKR+ V PTHY
Sbjct: 332  SGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHY 391

Query: 1761 TFGNLLSACANLADLRLGQQAHTHVLKHGFRFESGPESDIFVGNSLIDMYVKCGSIEDGT 1582
            TFGNLL+A ANLADL LG+QAH+HV+KHGFRF+SG E DIFVGNSLIDMY+KCGS+E+G 
Sbjct: 392  TFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGL 451

Query: 1581 RAFRNMTHRDWVSWNAIIVGFAQNGYGTETLELFKEMLASGEKPDHVTMIGLLSACSHAG 1402
            R F NM  +D VSWN +I+G+AQNGYG E LELF++ML SGEKPDHVTMIG L ACSHAG
Sbjct: 452  RVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACSHAG 511

Query: 1401 LVEEGRHHFYSMSKEHGIEPMTDHYACMVDLLGRAGCLDEAKDLIETMPIQPDAVVWASL 1222
            LVEEGR +F+SM+KEHG+ P+ DHY CMVDLLGRAGCL+EAKDLIE+MP QPDAVVW+SL
Sbjct: 512  LVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVWSSL 571

Query: 1221 LGACKVHRNIELGKYVAEKLIEIDSNNSGPYVLLSNMYAEQGNWGDVKRVRKLMKQRGVI 1042
            L ACKVHRNI LGKYVAEK+ EID  +SGPYVLL+NMY+E G WGD   VRKLM++RGV+
Sbjct: 572  LSACKVHRNITLGKYVAEKIFEIDPTSSGPYVLLANMYSELGRWGDAVSVRKLMRRRGVV 631

Query: 1041 KQPGCSWIEVDGKVHVFMVKDRRQPQKKEIYMLLRTLCKVMNLFGYVPNAHDLEANEEGS 862
            KQPGCSWI++   VHVFMVKD+R PQKKEIY +L+ L K M   GYVP+A D EA EE  
Sbjct: 632  KQPGCSWIDIQSNVHVFMVKDKRHPQKKEIYSILKLLTKHMRQAGYVPDASDHEAYEE-P 690

Query: 861  SDLNSS 844
            S+L SS
Sbjct: 691  SELESS 696



 Score =  174 bits (441), Expect = 9e-41
 Identities = 101/307 (32%), Positives = 159/307 (51%)
 Frame = -2

Query: 2169 DEVTLASMISACASLSKLNVGREIHSRVMKFNKLRDDLVICNALVDMYAKCSRIVEARWI 1990
            D    A ++  C  L      R +H R+++     +++ I N L+D+Y KC  +  AR +
Sbjct: 23   DSSPFAKLLDLCVKLRSSRDARSVHGRLIQ-TPFCEEVFIQNRLIDVYGKCGYLDYARKV 81

Query: 1989 FDTMPLKNIITETSIISGYAKAANVETARSMFVNMTERNIVSWNALIAGYTQNGDNEVAL 1810
            FD M  +N+ +  SIIS   +   V+ +  +F  M E++  SWN++IAG+ Q+   E AL
Sbjct: 82   FDRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEAL 141

Query: 1809 GLFRQLKRDGVFPTHYTFGNLLSACANLADLRLGQQAHTHVLKHGFRFESGPESDIFVGN 1630
              F ++ RD      Y+FG+ LSAC+ L DL+LG Q H  + K  +        D+F+G+
Sbjct: 142  DWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSL------DVFMGS 195

Query: 1629 SLIDMYVKCGSIEDGTRAFRNMTHRDWVSWNAIIVGFAQNGYGTETLELFKEMLASGEKP 1450
             LID Y KCG +    R F  M  ++ VSWN +I  + QNG   E LE F  M   G KP
Sbjct: 196  GLIDFYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKP 255

Query: 1449 DHVTMIGLLSACSHAGLVEEGRHHFYSMSKEHGIEPMTDHYACMVDLLGRAGCLDEAKDL 1270
            D VT+  ++SAC+     +EG      + K             +VD+  + G ++EA+ +
Sbjct: 256  DEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCV 315

Query: 1269 IETMPIQ 1249
             + MP++
Sbjct: 316  FDRMPVR 322



 Score =  154 bits (389), Expect = 1e-34
 Identities = 122/429 (28%), Positives = 183/429 (42%), Gaps = 68/429 (15%)
 Frame = -2

Query: 2301 KVFDGMSQRNV-------------------------------VSWNSLITCYEQNGPACE 2215
            KVFD MS+RNV                                SWNS+I  + Q+    E
Sbjct: 80   KVFDRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEE 139

Query: 2214 ALDIFMKMMNSGIEPDEVTLASMISACASLSKLNVGREIHSRVMKFNKLRDDLVICNALV 2035
            ALD F++M       ++ +  S +SAC+ L  L +G +IH  + K +K   D+ + + L+
Sbjct: 140  ALDWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISK-SKYSLDVFMGSGLI 198

Query: 2034 DMYAKCSRIVEARWIFDTMPLKNIITETSIISGYAKAANVETARSMFVNMTERNIVSWNA 1855
            D Y+KC  +  AR +FD M  KN+                               VSWN 
Sbjct: 199  DFYSKCGLVGCARRVFDGMEEKNV-------------------------------VSWNC 227

Query: 1854 LIAGYTQNGDNEVALGLFRQLKRDGVFPTHYTFGNLLSACANLADLRLGQQAHTHVLKHG 1675
            LI  Y QNG    AL  F ++   G  P   T  +++SACA LA  + G Q H  V+K  
Sbjct: 228  LITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACATLAAFKEGVQIHARVVKSD 287

Query: 1674 -FRFESGPESDIFVGNSLIDMYVKCG-------------------------------SIE 1591
             FR      +D+ +GN+L+DMY KCG                               S++
Sbjct: 288  KFR------NDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVK 341

Query: 1590 DGTRAFRNMTHRDWVSWNAIIVGFAQNGYGTETLELFKEMLASGEKPDHVTMIGLLSACS 1411
                 F  +  +D VSWNA+I G+ QNG   E L LF+ +      P H T   LL+A +
Sbjct: 342  AARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASA 401

Query: 1410 HAGLVEEGRHHFYSMSK-----EHGIEPMTDHYACMVDLLGRAGCLDEAKDLIETMPIQP 1246
            +   +E GR     + K     + G EP       ++D+  + G ++E   + E M ++ 
Sbjct: 402  NLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENM-VEK 460

Query: 1245 DAVVWASLL 1219
            D V W +++
Sbjct: 461  DHVSWNTMI 469


>ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355491679|gb|AES72882.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 705

 Score =  708 bits (1828), Expect = 0.0
 Identities = 339/494 (68%), Positives = 409/494 (82%), Gaps = 1/494 (0%)
 Frame = -2

Query: 2301 KVFDGMSQRNVVSWNSLITCYEQNGPACEALDIFMKMMNSGIEPDEVTLASMISACASLS 2122
            + FD M  RN+VSWNSLITCYEQNGPA +AL++F++MMN GIEPDE+TLAS+ SACASLS
Sbjct: 207  RAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLS 266

Query: 2121 KLNVGREIHSRVMKFNKLRDDLVICNALVDMYAKCSRIVEARWIFDTMPLKNIITETSII 1942
             +  G +IH+RVMK +K R+DLV+ NALVDMYAKC R+ EAR +FD MPL+++++ETS++
Sbjct: 267  AIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMV 326

Query: 1941 SGYAKAANVETARSMFVNMTERNIVSWNALIAGYTQNGDNEVALGLFRQLKRDGVFPTHY 1762
            SGYAKA++V+ AR MF NM ERN+VSWNALIAGYTQNG+NE A+ LF  LKR+ ++PTHY
Sbjct: 327  SGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHY 386

Query: 1761 TFGNLLSACANLADLRLGQQAHTHVLKHGFRFESGPESDIFVGNSLIDMYVKCGSIEDGT 1582
            TFGNLL+ACANLADL+LG+QAHTH+LKHGF F+SG +SDIFVGNSLIDMY+KCG +EDG 
Sbjct: 387  TFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGR 446

Query: 1581 RAFRNMTHRDWVSWNAIIVGFAQNGYGTETLELFKEMLASGEKPDHVTMIGLLSACSHAG 1402
              F  M  RD VSWNA+IVG+AQNGYGTE LE+F+EML SGE+PDHVTMIG+LSACSHAG
Sbjct: 447  LVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAG 506

Query: 1401 LVEEGRHHFYSMSKEHGIEPMTDHYACMVDLLGRAGCLDEAKDLIETMPIQPDAVVWASL 1222
            LVEEGR +F SM+ EHG+ P+ DHY CMVDLLGRAGCLDEA +LI+TMP++PDAVVW SL
Sbjct: 507  LVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSL 566

Query: 1221 LGACKVHRNIELGKYVAEKLIEIDSNNSGPYVLLSNMYAEQGNWGDVKRVRKLMKQRGVI 1042
            L ACKVH NI LGKYVAE+L+EID  NSGPYVLLSNMYAE G W DV RVRK M+Q GVI
Sbjct: 567  LAACKVHGNITLGKYVAERLLEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQMGVI 626

Query: 1041 KQPGCSWIEVDGKVHVFMVKDRRQPQKKEIYMLLRTLCKVMNLFGYVPNAHDLEA-NEEG 865
            KQPGCSWI +   +HVFMVKD+R P KK+IY++L+ L + M   GYVP A D E   EE 
Sbjct: 627  KQPGCSWISIQSHLHVFMVKDKRHPHKKDIYLILKILTEQMKRVGYVPEADDDEPYEEES 686

Query: 864  SSDLNSSQDLEEPI 823
             S+L    ++E  +
Sbjct: 687  DSELILHSEMETAV 700



 Score =  172 bits (435), Expect = 5e-40
 Identities = 103/375 (27%), Positives = 186/375 (49%)
 Frame = -2

Query: 2169 DEVTLASMISACASLSKLNVGREIHSRVMKFNKLRDDLVICNALVDMYAKCSRIVEARWI 1990
            D    A ++  C     +   R +H+R++K  +   ++ I N LVD+Y KC  + +AR +
Sbjct: 18   DSSPFAKLLDTCVKSKSVFEARLVHARIIK-TQFSSEIFIQNRLVDVYGKCGFLEDARKV 76

Query: 1989 FDTMPLKNIITETSIISGYAKAANVETARSMFVNMTERNIVSWNALIAGYTQNGDNEVAL 1810
            FD M  +N  +  +++    K   ++ A ++F  M ER+  SWNA+++G+ Q    E AL
Sbjct: 77   FDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEAL 136

Query: 1809 GLFRQLKRDGVFPTHYTFGNLLSACANLADLRLGQQAHTHVLKHGFRFESGPESDIFVGN 1630
                 +  +      Y+FG+ LSACA L DL +G Q H  + K  +        D+++G+
Sbjct: 137  RFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSL------DVYMGS 190

Query: 1629 SLIDMYVKCGSIEDGTRAFRNMTHRDWVSWNAIIVGFAQNGYGTETLELFKEMLASGEKP 1450
            +L+DMY KC  +    RAF +M  R+ VSWN++I  + QNG   + LE+F  M+  G +P
Sbjct: 191  ALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEP 250

Query: 1449 DHVTMIGLLSACSHAGLVEEGRHHFYSMSKEHGIEPMTDHYACMVDLLGRAGCLDEAKDL 1270
            D +T+  + SAC+    + EG      + K             +VD+  +   ++EA+ +
Sbjct: 251  DEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLV 310

Query: 1269 IETMPIQPDAVVWASLLGACKVHRNIELGKYVAEKLIEIDSNNSGPYVLLSNMYAEQGNW 1090
             + MP++ D V   S++       +++  + +   ++E    N   +  L   Y + G  
Sbjct: 311  FDRMPLR-DVVSETSMVSGYAKASSVKAARLMFSNMME---RNVVSWNALIAGYTQNGEN 366

Query: 1089 GDVKRVRKLMKQRGV 1045
             +  R+  L+K+  +
Sbjct: 367  EEAVRLFLLLKRESI 381



 Score =  151 bits (381), Expect = 8e-34
 Identities = 111/401 (27%), Positives = 184/401 (45%), Gaps = 41/401 (10%)
 Frame = -2

Query: 2298 VFDGMSQRNVVSWNSLITCYEQNGPACEALDIFMKMMNSGIEPDEVTLASMISACASLSK 2119
            +F  M +R+  SWN++++ + Q     EAL   + M +     +E +  S +SACA L  
Sbjct: 107  LFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMD 166

Query: 2118 LNVGREIHSRVMKFNKLRDDLVICNALVDMYAKCSRIVEARWIFDTMPLKNIITETSIIS 1939
            L++G +IH  + K ++   D+ + +ALVDMY+KC  +  A+  FD M ++NI++  S   
Sbjct: 167  LSIGVQIHGLIAK-SRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNS--- 222

Query: 1938 GYAKAANVETARSMFVNMTERNIVSWNALIAGYTQNGDNEVALGLFRQLKRDGVFPTHYT 1759
                                        LI  Y QNG    AL +F ++   G+ P   T
Sbjct: 223  ----------------------------LITCYEQNGPAGKALEVFVRMMNCGIEPDEIT 254

Query: 1758 FGNLLSACANLADLRLGQQAHTHVLKHGFRFESGPESDIFVGNSLIDMYVKC-------- 1603
              ++ SACA+L+ +R G Q H  V+KH         +D+ +GN+L+DMY KC        
Sbjct: 255  LASVASACASLSAIREGLQIHARVMKH-----DKYRNDLVLGNALVDMYAKCRRVNEARL 309

Query: 1602 -----------------------GSIEDGTRAFRNMTHRDWVSWNAIIVGFAQNGYGTET 1492
                                    S++     F NM  R+ VSWNA+I G+ QNG   E 
Sbjct: 310  VFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEA 369

Query: 1491 LELFKEMLASGEKPDHVTMIGLLSACSHAGLVEEGR--------HHFYSMSKEHGIEPMT 1336
            + LF  +      P H T   LL+AC++   ++ GR        H F+  S E      +
Sbjct: 370  VRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGED-----S 424

Query: 1335 DHYA--CMVDLLGRAGCLDEAKDLIETMPIQPDAVVWASLL 1219
            D +    ++D+  + G +++ + + E M ++ D V W +++
Sbjct: 425  DIFVGNSLIDMYMKCGLVEDGRLVFERM-LERDNVSWNAMI 464


>ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like
            [Glycine max]
          Length = 705

 Score =  705 bits (1819), Expect = 0.0
 Identities = 338/496 (68%), Positives = 410/496 (82%), Gaps = 1/496 (0%)
 Frame = -2

Query: 2301 KVFDGMSQRNVVSWNSLITCYEQNGPACEALDIFMKMMNSGIEPDEVTLASMISACASLS 2122
            + FDGM+ RN+VSWNSLITCYEQNGPA +AL++F+ MM++G+EPDE+TLAS++SACAS S
Sbjct: 207  RAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACASWS 266

Query: 2121 KLNVGREIHSRVMKFNKLRDDLVICNALVDMYAKCSRIVEARWIFDTMPLKNIITETSII 1942
             +  G +IH+RV+K +K R+DLV+ NALVDMYAKC R+ EAR +FD MPL+N+++ETS++
Sbjct: 267  AIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSMV 326

Query: 1941 SGYAKAANVETARSMFVNMTERNIVSWNALIAGYTQNGDNEVALGLFRQLKRDGVFPTHY 1762
             GYA+AA+V+ AR MF NM E+N+VSWNALIAGYTQNG+NE A+ LF  LKR+ ++PTHY
Sbjct: 327  CGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHY 386

Query: 1761 TFGNLLSACANLADLRLGQQAHTHVLKHGFRFESGPESDIFVGNSLIDMYVKCGSIEDGT 1582
            TFGNLL+ACANLADL+LG+QAHT +LKHGF F+SG ESDIFVGNSLIDMY+KCG +EDG 
Sbjct: 387  TFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGC 446

Query: 1581 RAFRNMTHRDWVSWNAIIVGFAQNGYGTETLELFKEMLASGEKPDHVTMIGLLSACSHAG 1402
              F  M  RD VSWNA+IVG+AQNGYGT  LE+F++ML SG+KPDHVTMIG+LSACSHAG
Sbjct: 447  LVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACSHAG 506

Query: 1401 LVEEGRHHFYSMSKEHGIEPMTDHYACMVDLLGRAGCLDEAKDLIETMPIQPDAVVWASL 1222
            LVEEGR +F+SM  E G+ PM DH+ CMVDLLGRAGCLDEA DLI+TMP+QPD VVW SL
Sbjct: 507  LVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVVWGSL 566

Query: 1221 LGACKVHRNIELGKYVAEKLIEIDSNNSGPYVLLSNMYAEQGNWGDVKRVRKLMKQRGVI 1042
            L ACKVH NIELGKYVAEKL+EID  NSGPYVLLSNMYAE G W DV RVRK M+QRGVI
Sbjct: 567  LAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQRGVI 626

Query: 1041 KQPGCSWIEVDGKVHVFMVKDRRQPQKKEIYMLLRTLCKVMNLFGYVPNAHDLE-ANEEG 865
            KQPGCSWIE+  +VHVFMVKD+R P KK+I+++L+ L + M   GYVP A D E   EE 
Sbjct: 627  KQPGCSWIEIQSRVHVFMVKDKRHPLKKDIHLVLKFLTEQMKWAGYVPEADDDEICEEES 686

Query: 864  SSDLNSSQDLEEPITT 817
             S+L    ++E    T
Sbjct: 687  DSELVLHFEMETEADT 702



 Score =  175 bits (443), Expect = 5e-41
 Identities = 106/375 (28%), Positives = 190/375 (50%)
 Frame = -2

Query: 2169 DEVTLASMISACASLSKLNVGREIHSRVMKFNKLRDDLVICNALVDMYAKCSRIVEARWI 1990
            D    A ++ +C         R IH+R++K  +   ++ I N LVD Y KC    +AR +
Sbjct: 18   DSSPFAKLLDSCVRSKSGIDARRIHARIIK-TQFSSEIFIQNRLVDAYGKCGYFEDARKV 76

Query: 1989 FDTMPLKNIITETSIISGYAKAANVETARSMFVNMTERNIVSWNALIAGYTQNGDNEVAL 1810
            FD MP +N  +  +++S   K   ++ A ++F +M E +  SWNA+++G+ Q+   E AL
Sbjct: 77   FDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEAL 136

Query: 1809 GLFRQLKRDGVFPTHYTFGNLLSACANLADLRLGQQAHTHVLKHGFRFESGPESDIFVGN 1630
              F  +  +      Y+FG+ LSACA L DL +G Q H  + K  +        D+++G+
Sbjct: 137  RFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLL------DVYMGS 190

Query: 1629 SLIDMYVKCGSIEDGTRAFRNMTHRDWVSWNAIIVGFAQNGYGTETLELFKEMLASGEKP 1450
            +L+DMY KCG +    RAF  M  R+ VSWN++I  + QNG   + LE+F  M+ +G +P
Sbjct: 191  ALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEP 250

Query: 1449 DHVTMIGLLSACSHAGLVEEGRHHFYSMSKEHGIEPMTDHYACMVDLLGRAGCLDEAKDL 1270
            D +T+  ++SAC+    + EG      + K             +VD+  +   ++EA+ +
Sbjct: 251  DEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLV 310

Query: 1269 IETMPIQPDAVVWASLLGACKVHRNIELGKYVAEKLIEIDSNNSGPYVLLSNMYAEQGNW 1090
             + MP++ + V   S++       +++  + +   ++E    N   +  L   Y + G  
Sbjct: 311  FDRMPLR-NVVSETSMVCGYARAASVKAARLMFSNMME---KNVVSWNALIAGYTQNGEN 366

Query: 1089 GDVKRVRKLMKQRGV 1045
             +  R+  L+K+  +
Sbjct: 367  EEAVRLFLLLKRESI 381



 Score =  149 bits (376), Expect = 3e-33
 Identities = 111/401 (27%), Positives = 185/401 (46%), Gaps = 41/401 (10%)
 Frame = -2

Query: 2298 VFDGMSQRNVVSWNSLITCYEQNGPACEALDIFMKMMNSGIEPDEVTLASMISACASLSK 2119
            VF  M + +  SWN++++ + Q+    EAL  F+ M +     +E +  S +SACA L+ 
Sbjct: 107  VFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALSACAGLTD 166

Query: 2118 LNVGREIHSRVMKFNKLRDDLVICNALVDMYAKCSRIVEARWIFDTMPLKNIITETSIIS 1939
            LN+G +IH+ + K   L  D+ + +ALVDMY+KC  +  A+  FD M ++NI++  S+I+
Sbjct: 167  LNMGIQIHALISKSRYLL-DVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLIT 225

Query: 1938 GYAKAANVETARSMFVNMTERNIVSWNALIAGYTQNGDNEVALGLFRQLKRDGVFPTHYT 1759
                                            Y QNG    AL +F  +  +GV P   T
Sbjct: 226  -------------------------------CYEQNGPAGKALEVFVMMMDNGVEPDEIT 254

Query: 1758 FGNLLSACANLADLRLGQQAHTHVLKHGFRFESGPESDIFVGNSLIDMYVKC-------- 1603
              +++SACA+ + +R G Q H  V+K          +D+ +GN+L+DMY KC        
Sbjct: 255  LASVVSACASWSAIREGLQIHARVVK-----RDKYRNDLVLGNALVDMYAKCRRVNEARL 309

Query: 1602 -----------------------GSIEDGTRAFRNMTHRDWVSWNAIIVGFAQNGYGTET 1492
                                    S++     F NM  ++ VSWNA+I G+ QNG   E 
Sbjct: 310  VFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEA 369

Query: 1491 LELFKEMLASGEKPDHVTMIGLLSACSHAGLVEEGR--------HHFYSMSKEHGIEPMT 1336
            + LF  +      P H T   LL+AC++   ++ GR        H F+  S E      +
Sbjct: 370  VRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEE-----S 424

Query: 1335 DHYA--CMVDLLGRAGCLDEAKDLIETMPIQPDAVVWASLL 1219
            D +    ++D+  + G +++   + E M ++ D V W +++
Sbjct: 425  DIFVGNSLIDMYMKCGMVEDGCLVFERM-VERDVVSWNAMI 464


>ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297329643|gb|EFH60062.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 697

 Score =  684 bits (1765), Expect = 0.0
 Identities = 321/461 (69%), Positives = 382/461 (82%)
 Frame = -2

Query: 2301 KVFDGMSQRNVVSWNSLITCYEQNGPACEALDIFMKMMNSGIEPDEVTLASMISACASLS 2122
            +VFD M  RNVVSWNSLITCYEQNGPA EAL +F  M+ S +EPDEVTLAS+ISACASLS
Sbjct: 208  QVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLS 267

Query: 2121 KLNVGREIHSRVMKFNKLRDDLVICNALVDMYAKCSRIVEARWIFDTMPLKNIITETSII 1942
             + VG+E+H+RV+K +KLR+D+++ NA VDMYAKCSRI EAR+IFD+MP++N+I ETS++
Sbjct: 268  AIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMV 327

Query: 1941 SGYAKAANVETARSMFVNMTERNIVSWNALIAGYTQNGDNEVALGLFRQLKRDGVFPTHY 1762
            SGYA AA+ + AR MF  M ERN+VSWNALIAGYTQNG+NE AL LF  LKR+ V PTHY
Sbjct: 328  SGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHY 387

Query: 1761 TFGNLLSACANLADLRLGQQAHTHVLKHGFRFESGPESDIFVGNSLIDMYVKCGSIEDGT 1582
            TF N+L ACA+LADL LG QAH HVLKHGF+F+SG E DIFVGNSLIDMYVKCG +E+G 
Sbjct: 388  TFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGY 447

Query: 1581 RAFRNMTHRDWVSWNAIIVGFAQNGYGTETLELFKEMLASGEKPDHVTMIGLLSACSHAG 1402
              FR M  RD VSWNA+I+GFAQNGYG E LELF+EML SGEKPDH+TMIG+LSAC HAG
Sbjct: 448  LVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGVLSACGHAG 507

Query: 1401 LVEEGRHHFYSMSKEHGIEPMTDHYACMVDLLGRAGCLDEAKDLIETMPIQPDAVVWASL 1222
             VEEGRH+F SM+++ G+ P+ DHY CMVDLLGRAG L+EAK +IE MP+QPD+V+W SL
Sbjct: 508  FVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSVIWGSL 567

Query: 1221 LGACKVHRNIELGKYVAEKLIEIDSNNSGPYVLLSNMYAEQGNWGDVKRVRKLMKQRGVI 1042
            L ACKVHRNI LGKYVAEKL E++++NSGPYVLLSNMYAE G WGD   VRKLM++ GV 
Sbjct: 568  LAACKVHRNITLGKYVAEKLFEVETSNSGPYVLLSNMYAELGKWGDAMNVRKLMRKEGVT 627

Query: 1041 KQPGCSWIEVDGKVHVFMVKDRRQPQKKEIYMLLRTLCKVM 919
            KQPGCSWI++ G  HVFMVKD+  P+KK+I+ LL  L   M
Sbjct: 628  KQPGCSWIKIPGHAHVFMVKDKSHPRKKQIHSLLDILIAEM 668



 Score =  184 bits (468), Expect = 7e-44
 Identities = 103/335 (30%), Positives = 188/335 (56%), Gaps = 2/335 (0%)
 Frame = -2

Query: 2154 ASMISACASL--SKLNVGREIHSRVMKFNKLRDDLVICNALVDMYAKCSRIVEARWIFDT 1981
            A ++ +C  L  S ++V R +H+ V+K +   +++ I N L+D YAKC  + + R +FD 
Sbjct: 23   AKLLDSCIKLKLSAIDV-RCVHASVIK-SGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDK 80

Query: 1980 MPLKNIITETSIISGYAKAANVETARSMFVNMTERNIVSWNALIAGYTQNGDNEVALGLF 1801
            MP +N+ T  S+++G  K   ++ A S+F +M ER+  +WN++++G+ Q+   E AL  F
Sbjct: 81   MPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYF 140

Query: 1800 RQLKRDGVFPTHYTFGNLLSACANLADLRLGQQAHTHVLKHGFRFESGPESDIFVGNSLI 1621
              + ++G     YTF + LSAC+ L D+  G Q H+ + K      S   SD+++G++L+
Sbjct: 141  AMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAK------SPCLSDVYIGSALV 194

Query: 1620 DMYVKCGSIEDGTRAFRNMTHRDWVSWNAIIVGFAQNGYGTETLELFKEMLASGEKPDHV 1441
            DMY KCG++ D  + F  M  R+ VSWN++I  + QNG   E L++F+ ML S  +PD V
Sbjct: 195  DMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEV 254

Query: 1440 TMIGLLSACSHAGLVEEGRHHFYSMSKEHGIEPMTDHYACMVDLLGRAGCLDEAKDLIET 1261
            T+  ++SAC+    ++ G+     + K   +          VD+  +   + EA+ + ++
Sbjct: 255  TLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDS 314

Query: 1260 MPIQPDAVVWASLLGACKVHRNIELGKYVAEKLIE 1156
            MPI+ + +   S++    +  + +  + +  K+ E
Sbjct: 315  MPIR-NVIAETSMVSGYAMAASTKAARLMFTKMAE 348



 Score =  157 bits (398), Expect = 9e-36
 Identities = 131/479 (27%), Positives = 205/479 (42%), Gaps = 68/479 (14%)
 Frame = -2

Query: 2301 KVFDGMSQRNVVSWNSLIT-----------------------C--------YEQNGPACE 2215
            ++FD M QRNV +WNS++T                       C        + Q+    E
Sbjct: 76   QLFDKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEE 135

Query: 2214 ALDIFMKMMNSGIEPDEVTLASMISACASLSKLNVGREIHSRVMKFNKLRDDLVICNALV 2035
            AL  F  M   G   +E T AS +SAC+ L+ +N G +IHS + K +    D+ I +ALV
Sbjct: 136  ALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAK-SPCLSDVYIGSALV 194

Query: 2034 DMYAKCSRIVEARWIFDTMPLKNIITETSIISGYAKAANVETARSMFVNMTERNIVSWNA 1855
            DMY+KC  + +A+ +FD M  +N+                               VSWN+
Sbjct: 195  DMYSKCGNVNDAQQVFDEMGDRNV-------------------------------VSWNS 223

Query: 1854 LIAGYTQNGDNEVALGLFRQLKRDGVFPTHYTFGNLLSACANLADLRLGQQAHTHVLKHG 1675
            LI  Y QNG    AL +F+ +    V P   T  +++SACA+L+ +++GQ+ H  V+K  
Sbjct: 224  LITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVK-- 281

Query: 1674 FRFESGPESDIFVGNSLIDMYVKCGSIED---------------------------GTRA 1576
                    +DI + N+ +DMY KC  I++                            T+A
Sbjct: 282  ---MDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKA 338

Query: 1575 ----FRNMTHRDWVSWNAIIVGFAQNGYGTETLELFKEMLASGEKPDHVTMIGLLSACS- 1411
                F  M  R+ VSWNA+I G+ QNG   E L LF  +      P H T   +L AC+ 
Sbjct: 339  ARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACAD 398

Query: 1410 ----HAGLVEEGRHHFYSMSKEHGIEPMTDHYACMVDLLGRAGCLDEAKDLIETMPIQPD 1243
                H G+        +    + G E        ++D+  + GC++E   +   M ++ D
Sbjct: 399  LADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM-MERD 457

Query: 1242 AVVW-ASLLGACKVHRNIELGKYVAEKLIEIDSNNSGPYVLLSNMYAEQGNWGDVKRVR 1069
             V W A ++G  +     E  +   E L   DS     ++ +  + +  G+ G V+  R
Sbjct: 458  CVSWNAMIIGFAQNGYGNEALELFREML---DSGEKPDHITMIGVLSACGHAGFVEEGR 513