BLASTX nr result

ID: Atractylodes22_contig00025937 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00025937
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...    61   8e-08
ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...    61   1e-07
gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]...    59   4e-07
ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...    56   3e-06

>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
 Frame = -2

Query: 183 LPEFSGYDPKGWIAKAELYFNIHGTPH-FRIHLAQLSMSGVAQHWFTIVKETHPDLTW 13
           LP F G DP  WI +AE+YF++  T    R+ LA+LSM G   HWF ++ ET  +L+W
Sbjct: 76  LPLFDGDDPVAWITRAEIYFDVQDTSDDMRVKLARLSMEGSTIHWFNLLMETEDELSW 133


>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355502480|gb|AES83683.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
 Frame = -2

Query: 183 LPEFSGYDPKGWIAKAELYFNIHGTP-HFRIHLAQLSMSGVAQHWFTIVKETHPDLT 16
           LP F G DP  WI +AE+YF++  TP   R+ L++LSM G   HWF ++ ET  DL+
Sbjct: 749 LPLFEGDDPVAWITRAEIYFDVQNTPDDMRVKLSRLSMEGPTIHWFNLLMETEDDLS 805


>gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]
           gi|124360393|gb|ABN08406.1| Retrotransposon gag protein
           [Medicago truncatula]
          Length = 224

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
 Frame = -2

Query: 174 FSGYDPKGWIAKAELYFNIHG-TPHFRIHLAQLSMSGVAQHWFTIVKETHPDLTW 13
           F+G DP GWIA+AE+YFN+   TP  +++LAQL M G   H+F  + E +  LTW
Sbjct: 89  FNGDDPAGWIARAEVYFNVQNTTPEIKVNLAQLCMDGPTIHFFKGLLEENETLTW 143


>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
 Frame = -2

Query: 183 LPEFSGYDPKGWIAKAELYFNIHGTPH-FRIHLAQLSMSGVAQHWFTIVKETHPDLTW 13
           LP F G D   WI + E+YF++  T    R+ LA+LSM G   HWF ++ ET  +L+W
Sbjct: 59  LPLFEGDDLVAWITRVEIYFDVQNTTDKMRVKLARLSMEGSTIHWFNLLMETEDELSW 116


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