BLASTX nr result
ID: Atractylodes22_contig00025923
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00025923
(1621 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]... 617 e-174
gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus] 617 e-174
sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contain... 617 e-174
ref|XP_002300438.1| predicted protein [Populus trichocarpa] gi|2... 489 e-135
ref|XP_002447697.1| hypothetical protein SORBIDRAFT_06g013680 [S... 326 1e-86
>ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]
gi|82061579|sp|Q91DM0.1|POLG_PVCV1 RecName: Full=Genome
polyprotein; Contains: RecName: Full=Movement protein;
Short=MP; Contains: RecName: Full=Capsid protein;
Short=CP; Contains: RecName: Full=Aspartic protease;
Short=PR; Contains: RecName: Full=Reverse transcriptase;
Short=RT gi|14574598|gb|AAK68664.1| ORF I polyprotein
[petunia vein clearing virus]
Length = 2179
Score = 617 bits (1592), Expect = e-174
Identities = 305/530 (57%), Positives = 386/530 (72%), Gaps = 2/530 (0%)
Frame = -3
Query: 1586 KISIPVHIRLFPKCVVKHRLLGSSSHGKDMLIGFDILHTLP-ALRYEEKGLRYKSFLNPW 1410
K P+ I FP +LLGS GKD+LIGFDI L LR G+R+K+ +
Sbjct: 1264 KTKHPITIEFFPGFKYTTKLLGSDIPGKDLLIGFDIYRQLNNKLRIGADGIRWKNQFKRY 1323
Query: 1409 SPIPRLF-VASALTMEDLKQRIVQTSCASSHTEFLAKNKAPLWLNPSFFVTLPFKQNEDV 1233
+ IPRLF + ++ ++ L+ I CA SH +FL+K PLWLN FF+ LPFK+NE++
Sbjct: 1324 TEIPRLFQLTTSNELQQLEDVIKNQLCADSHVDFLSKCSHPLWLNQDFFIQLPFKKNENI 1383
Query: 1232 NPTKASHPGMNPDHHQLAIQECSELVAQGIIEPTISPWACQAFYVNKRSEQVRGKLRLVI 1053
NPTKASH GMNP+H QLAI+EC EL +IEP+ S WAC+AFYVNKRSEQVRGKLRLVI
Sbjct: 1384 NPTKASHSGMNPEHLQLAIKECDELQQFDLIEPSDSQWACEAFYVNKRSEQVRGKLRLVI 1443
Query: 1052 NYQPLNHFLADDKFPLPQKKSLFQSLADTKVLSKFDLKAGFWQLGIHPEDRPKTAFCIPD 873
NYQPLNHFL DDKFP+P K +LF L+ K+ SKFDLK+GFWQLGIHP +RPKT FCIPD
Sbjct: 1444 NYQPLNHFLQDDKFPIPNKLTLFSHLSKAKLFSKFDLKSGFWQLGIHPNERPKTGFCIPD 1503
Query: 872 HHYQWNVMPFGLKNAPSAFQKAMVQIFEPIQQNVLVYIDDILLFSPDEKSHLDLLSKFHS 693
H+QW VMPFGLK APS FQKAM++IF+PI + LVYIDDILLFS + H+ LL++F S
Sbjct: 1504 RHFQWKVMPFGLKTAPSLFQKAMIKIFQPILFSALVYIDDILLFSETLEDHIKLLNQFIS 1563
Query: 692 IVMEKGVMLSEKKMEIGVTSIDFLGMKISDGKYQPQPHIVQEVHKFPDELTSQKEIQQFL 513
+V + GVMLS KKM + I FLGM +DG + P HI E+ KFPD S K+IQQFL
Sbjct: 1564 LVKKFGVMLSAKKMILAQNKIQFLGMDFADGTFSPAGHISLELQKFPDTNLSVKQIQQFL 1623
Query: 512 GLINYMADFLPKLSNHTVHLFPMLKKNPPTWSERQTLAVKAIKQLADKMPPLKIPNTTDK 333
G++NY+ DF+P+++ H L MLKK PP W + Q AVK +KQLA ++ L IP + K
Sbjct: 1624 GIVNYIRDFIPEVTEHISPLSDMLKKKPPAWGKCQDNAVKQLKQLAQQVKSLHIP-SEGK 1682
Query: 332 RVLQTDASDEYWAAVLLVQDENNVRRVCGYKSGTFKVSEQHYHSTFKEILAVKRGIERFQ 153
++LQTDASD+YW+AVLL ++ N R++CG+ SG FKVSEQHYHSTFKEILAVK GI++F
Sbjct: 1683 KILQTDASDQYWSAVLL-EEHNGKRKICGFASGKFKVSEQHYHSTFKEILAVKNGIKKFN 1741
Query: 152 FHLIGHEFLIEMDMSSFPRMLQFKKKMLPEAQLLRWANWFSQWKFTVKHI 3
F LI FL+EMDM +FP+M++ K++P +QLLRWA WFS ++F VKH+
Sbjct: 1742 FFLIHTNFLVEMDMRAFPKMIRLNPKIVPNSQLLRWAQWFSPYQFEVKHL 1791
>gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]
Length = 1886
Score = 617 bits (1590), Expect = e-174
Identities = 304/530 (57%), Positives = 386/530 (72%), Gaps = 2/530 (0%)
Frame = -3
Query: 1586 KISIPVHIRLFPKCVVKHRLLGSSSHGKDMLIGFDILHTLP-ALRYEEKGLRYKSFLNPW 1410
K P+ I FP +LLGS GKD+LIGFDI L LR G+R+K+ +
Sbjct: 1265 KTKHPITIEFFPGFKYTTKLLGSDIPGKDLLIGFDIYRQLNNKLRIGADGIRWKNQFKRY 1324
Query: 1409 SPIPRLF-VASALTMEDLKQRIVQTSCASSHTEFLAKNKAPLWLNPSFFVTLPFKQNEDV 1233
+ IPRLF + ++ ++ L+ I CA SH +FL+K PLWLN FF+ LPFK+NE++
Sbjct: 1325 TEIPRLFQLTTSNELQQLEDVIKNQLCAESHVDFLSKCSHPLWLNQDFFIQLPFKRNENI 1384
Query: 1232 NPTKASHPGMNPDHHQLAIQECSELVAQGIIEPTISPWACQAFYVNKRSEQVRGKLRLVI 1053
NPTKASH GMNP+H QLA++EC EL +IEP+ S WAC+AFYVNKRSEQVRGKLRLVI
Sbjct: 1385 NPTKASHSGMNPEHLQLALKECDELQQFDLIEPSDSQWACEAFYVNKRSEQVRGKLRLVI 1444
Query: 1052 NYQPLNHFLADDKFPLPQKKSLFQSLADTKVLSKFDLKAGFWQLGIHPEDRPKTAFCIPD 873
NYQPLNHFL DDKFP+P K +LF L+ K+ SKFDLK+GFWQLGIHP +RPKT FCIPD
Sbjct: 1445 NYQPLNHFLQDDKFPIPNKLTLFSHLSKAKLFSKFDLKSGFWQLGIHPNERPKTGFCIPD 1504
Query: 872 HHYQWNVMPFGLKNAPSAFQKAMVQIFEPIQQNVLVYIDDILLFSPDEKSHLDLLSKFHS 693
H+QW VMPFGLK APS FQKAM++IF+PI + LVYIDDILLFS + H+ LL++F S
Sbjct: 1505 RHFQWKVMPFGLKTAPSLFQKAMIKIFQPILFSALVYIDDILLFSETLEDHIKLLNQFIS 1564
Query: 692 IVMEKGVMLSEKKMEIGVTSIDFLGMKISDGKYQPQPHIVQEVHKFPDELTSQKEIQQFL 513
+V + GVMLS KKM + I FLGM +DG + P HI E+ KFPD S K+IQQFL
Sbjct: 1565 LVKKFGVMLSAKKMILAQNKIQFLGMDFADGTFSPAGHISLELQKFPDTNLSVKQIQQFL 1624
Query: 512 GLINYMADFLPKLSNHTVHLFPMLKKNPPTWSERQTLAVKAIKQLADKMPPLKIPNTTDK 333
G++NY+ DF+P+++ H L MLKK PP W + Q AVK +KQLA ++ L IP + K
Sbjct: 1625 GIVNYIRDFIPEVTEHISPLSDMLKKKPPAWGKCQDNAVKQLKQLAQQVKSLHIP-SEGK 1683
Query: 332 RVLQTDASDEYWAAVLLVQDENNVRRVCGYKSGTFKVSEQHYHSTFKEILAVKRGIERFQ 153
++LQTDASD+YW+AVLL ++ N R++CG+ SG FKVSEQHYHSTFKEILAVK GI++F
Sbjct: 1684 KILQTDASDQYWSAVLL-EEHNGKRKICGFASGKFKVSEQHYHSTFKEILAVKNGIKKFN 1742
Query: 152 FHLIGHEFLIEMDMSSFPRMLQFKKKMLPEAQLLRWANWFSQWKFTVKHI 3
F LI FL+EMDM +FP+M++ K++P +QLLRWA WFS ++F VKH+
Sbjct: 1743 FFLIHTNFLVEMDMRAFPKMIRLNPKIVPNSQLLRWAQWFSPYQFEVKHL 1792
>sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contains: RecName: Full=Movement
protein; Short=MP; Contains: RecName: Full=Capsid
protein; Short=CP; Contains: RecName: Full=Aspartic
protease; Short=PR; Contains: RecName: Full=Reverse
transcriptase; Short=RT gi|34328896|gb|AAO67368.1|
polyprotein 1 [Petunia vein clearing virus]
Length = 2180
Score = 617 bits (1590), Expect = e-174
Identities = 304/530 (57%), Positives = 386/530 (72%), Gaps = 2/530 (0%)
Frame = -3
Query: 1586 KISIPVHIRLFPKCVVKHRLLGSSSHGKDMLIGFDILHTLP-ALRYEEKGLRYKSFLNPW 1410
K P+ I FP +LLGS GKD+LIGFDI L LR G+R+K+ +
Sbjct: 1265 KTKHPITIEFFPGFKYTTKLLGSDIPGKDLLIGFDIYRQLNNKLRIGADGIRWKNQFKRY 1324
Query: 1409 SPIPRLF-VASALTMEDLKQRIVQTSCASSHTEFLAKNKAPLWLNPSFFVTLPFKQNEDV 1233
+ IPRLF + ++ ++ L+ I CA SH +FL+K PLWLN FF+ LPFK+NE++
Sbjct: 1325 TEIPRLFQLTTSNELQQLEDVIKNQLCAESHVDFLSKCSHPLWLNQDFFIQLPFKRNENI 1384
Query: 1232 NPTKASHPGMNPDHHQLAIQECSELVAQGIIEPTISPWACQAFYVNKRSEQVRGKLRLVI 1053
NPTKASH GMNP+H QLA++EC EL +IEP+ S WAC+AFYVNKRSEQVRGKLRLVI
Sbjct: 1385 NPTKASHSGMNPEHLQLALKECDELQQFDLIEPSDSQWACEAFYVNKRSEQVRGKLRLVI 1444
Query: 1052 NYQPLNHFLADDKFPLPQKKSLFQSLADTKVLSKFDLKAGFWQLGIHPEDRPKTAFCIPD 873
NYQPLNHFL DDKFP+P K +LF L+ K+ SKFDLK+GFWQLGIHP +RPKT FCIPD
Sbjct: 1445 NYQPLNHFLQDDKFPIPNKLTLFSHLSKAKLFSKFDLKSGFWQLGIHPNERPKTGFCIPD 1504
Query: 872 HHYQWNVMPFGLKNAPSAFQKAMVQIFEPIQQNVLVYIDDILLFSPDEKSHLDLLSKFHS 693
H+QW VMPFGLK APS FQKAM++IF+PI + LVYIDDILLFS + H+ LL++F S
Sbjct: 1505 RHFQWKVMPFGLKTAPSLFQKAMIKIFQPILFSALVYIDDILLFSETLEDHIKLLNQFIS 1564
Query: 692 IVMEKGVMLSEKKMEIGVTSIDFLGMKISDGKYQPQPHIVQEVHKFPDELTSQKEIQQFL 513
+V + GVMLS KKM + I FLGM +DG + P HI E+ KFPD S K+IQQFL
Sbjct: 1565 LVKKFGVMLSAKKMILAQNKIQFLGMDFADGTFSPAGHISLELQKFPDTNLSVKQIQQFL 1624
Query: 512 GLINYMADFLPKLSNHTVHLFPMLKKNPPTWSERQTLAVKAIKQLADKMPPLKIPNTTDK 333
G++NY+ DF+P+++ H L MLKK PP W + Q AVK +KQLA ++ L IP + K
Sbjct: 1625 GIVNYIRDFIPEVTEHISPLSDMLKKKPPAWGKCQDNAVKQLKQLAQQVKSLHIP-SEGK 1683
Query: 332 RVLQTDASDEYWAAVLLVQDENNVRRVCGYKSGTFKVSEQHYHSTFKEILAVKRGIERFQ 153
++LQTDASD+YW+AVLL ++ N R++CG+ SG FKVSEQHYHSTFKEILAVK GI++F
Sbjct: 1684 KILQTDASDQYWSAVLL-EEHNGKRKICGFASGKFKVSEQHYHSTFKEILAVKNGIKKFN 1742
Query: 152 FHLIGHEFLIEMDMSSFPRMLQFKKKMLPEAQLLRWANWFSQWKFTVKHI 3
F LI FL+EMDM +FP+M++ K++P +QLLRWA WFS ++F VKH+
Sbjct: 1743 FFLIHTNFLVEMDMRAFPKMIRLNPKIVPNSQLLRWAQWFSPYQFEVKHL 1792
>ref|XP_002300438.1| predicted protein [Populus trichocarpa] gi|222847696|gb|EEE85243.1|
predicted protein [Populus trichocarpa]
Length = 615
Score = 489 bits (1258), Expect = e-135
Identities = 243/407 (59%), Positives = 298/407 (73%)
Frame = -3
Query: 1223 KASHPGMNPDHHQLAIQECSELVAQGIIEPTISPWACQAFYVNKRSEQVRGKLRLVINYQ 1044
KASH GMNP+H LA +EC++L AQG+IEPT S C+AFYVNKRS Q RGKLRLVINYQ
Sbjct: 2 KASHSGMNPEHKILAQEECAQLQAQGLIEPTDSQ--CEAFYVNKRSGQKRGKLRLVINYQ 59
Query: 1043 PLNHFLADDKFPLPQKKSLFQSLADTKVLSKFDLKAGFWQLGIHPEDRPKTAFCIPDHHY 864
PLNHFL DDKFPLP +LF L + KV SKFDLKAGFWQLGIHPEDR KT FCIPDHHY
Sbjct: 60 PLNHFLQDDKFPLPNTMTLFSCLHNAKVFSKFDLKAGFWQLGIHPEDRYKTGFCIPDHHY 119
Query: 863 QWNVMPFGLKNAPSAFQKAMVQIFEPIQQNVLVYIDDILLFSPDEKSHLDLLSKFHSIVM 684
QW VMPFGLK APS FQKAM+++FEP+ Q L+YIDD+LLFS DE SH+ LL +F IV
Sbjct: 120 QWRVMPFGLKVAPSLFQKAMIKVFEPMFQLALIYIDDVLLFSKDEDSHVTLLKQFAEIVH 179
Query: 683 EKGVMLSEKKMEIGVTSIDFLGMKISDGKYQPQPHIVQEVHKFPDELTSQKEIQQFLGLI 504
G+MLSE KM I I+FLGM +DG Y P HI +E+ KF D ++K+IQQFLG++
Sbjct: 180 HHGIMLSESKMLICQKEIEFLGMVFADGAYTPSTHIAEELQKFSDSPLTRKQIQQFLGIV 239
Query: 503 NYMADFLPKLSNHTVHLFPMLKKNPPTWSERQTLAVKAIKQLADKMPPLKIPNTTDKRVL 324
Y+ +F+P+++ T L +LKK+ +W+E+QT A R+L
Sbjct: 240 QYLRNFIPRVAQMTRPLQLILKKDADSWTEKQTQA----------------------RIL 277
Query: 323 QTDASDEYWAAVLLVQDENNVRRVCGYKSGTFKVSEQHYHSTFKEILAVKRGIERFQFHL 144
QTD SD+YW+ VLL +D+N R +CGYKSG+FK SE HYHSTFKEILAVK GI++F+FHL
Sbjct: 278 QTDVSDKYWSDVLL-EDKNGHRHICGYKSGSFKESETHYHSTFKEILAVKYGIQKFEFHL 336
Query: 143 IGHEFLIEMDMSSFPRMLQFKKKMLPEAQLLRWANWFSQWKFTVKHI 3
+ + F + MD SSFP+MLQFK+KM P QLLR A WF ++ FTV+HI
Sbjct: 337 VAYHFTVIMDCSSFPKMLQFKRKMPPHPQLLRLAEWFPKYTFTVEHI 383
>ref|XP_002447697.1| hypothetical protein SORBIDRAFT_06g013680 [Sorghum bicolor]
gi|241938880|gb|EES12025.1| hypothetical protein
SORBIDRAFT_06g013680 [Sorghum bicolor]
Length = 1360
Score = 326 bits (835), Expect = 1e-86
Identities = 177/461 (38%), Positives = 277/461 (60%), Gaps = 4/461 (0%)
Frame = -3
Query: 1373 TMEDLKQRIVQTSCASSHTEFLAKN-KAPLWLNPSFFVTLPFKQ--NEDVNPTKASHPGM 1203
T+ED K +I + + L + + W VTLP+ +ED PTKA M
Sbjct: 870 TLEDPKFKIKIKALEDKFIKDLCSDIPSAFWHRKKHVVTLPYISGFSEDKIPTKARPIQM 929
Query: 1202 NPDHHQLAIQECSELVAQGIIEPTISPWACQAFYVNKRSEQVRGKLRLVINYQPLNHFLA 1023
N ++ E +EL+ +G+I + +PW+C AFYV +E+ RG RLVINY+PLN L
Sbjct: 930 NSRLLEICKSEINELLKKGLIRKSSAPWSCAAFYVENAAEKERGVPRLVINYKPLNKVLQ 989
Query: 1022 DDKFPLPQKKSLFQSLADTKVLSKFDLKAGFWQLGIHPEDRPKTAFCIPDHHYQWNVMPF 843
++P+P K L + + +++ SKFD+K+GFWQ+ I EDR KTAF P HY+WNVM F
Sbjct: 990 WIRYPIPYKHDLIRRIQGSQIYSKFDMKSGFWQIQIKEEDRYKTAFTTPFGHYEWNVMTF 1049
Query: 842 GLKNAPSAFQKAMVQIFEPIQQNVLVYIDDILLFSPDEKSHLDLLSKFHSIVMEKGVMLS 663
GLKNAPS FQK M +IF P ++VYIDD+L+FS + H L+ FH I+++ G+++S
Sbjct: 1050 GLKNAPSEFQKIMNEIFLPYTSFIIVYIDDVLIFSQNIDQHWKHLNIFHKIIIQNGLVIS 1109
Query: 662 EKKMEIGVTSIDFLGMKISDGKYQPQPHIVQEVHKFPDELTSQKEIQQFLGLINYMADFL 483
+KM++ T+I FLG KI + P +++ KFPDE+ +K++Q+FLG +NY++DF
Sbjct: 1110 ARKMKLFQTNIQFLGYKIQHDQVLPVTRVIEFADKFPDEIKEKKQLQRFLGCLNYVSDFY 1169
Query: 482 PKLSNHTVHLFPMLKKNPPTWSERQTLAVKAIKQLADKMPPLKIPNTTDKRVLQTDASDE 303
+L+ L LKKNPP W+ R T AVK IK ++P L I + ++++TDASD
Sbjct: 1170 ERLAKDRKILTERLKKNPPAWTTRHTQAVKQIKDKVKRLPCLYILDHDALKIIETDASDF 1229
Query: 302 YWAAVLLVQDENNVRRVCGYKSGTFKVSEQHYHSTFKEILAVKRGIERFQFHLIGHEFLI 123
+ + L Q +++ ++ + SGT+ ++++Y + KEILA+ + + +FQ L+ +FL+
Sbjct: 1230 GYGGI-LKQRKDSKEQLVWFASGTWNDAQRNYSTIKKEILAIVKIVSKFQGELLNQKFLL 1288
Query: 122 EMDMSSFPRMLQFKKKMLPEAQLL-RWANWFSQWKFTVKHI 3
+D + +LQ + L Q+ RW S + F ++HI
Sbjct: 1289 RIDCKAAKDVLQQDVENLVSKQIFARWQAILSCFDFDIEHI 1329