BLASTX nr result

ID: Atractylodes22_contig00025911 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00025911
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527480.1| conserved hypothetical protein [Ricinus comm...    79   6e-13
ref|XP_003594188.1| F-box protein [Medicago truncatula] gi|87162...    77   2e-12
ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
emb|CBI40164.3| unnamed protein product [Vitis vinifera]               69   3e-10
gb|ADZ74124.1| S-haplotype-specific F-box protein [Prunus pseudo...    69   5e-10

>ref|XP_002527480.1| conserved hypothetical protein [Ricinus communis]
           gi|223533120|gb|EEF34878.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 379

 Score = 78.6 bits (192), Expect = 6e-13
 Identities = 55/190 (28%), Positives = 90/190 (47%), Gaps = 12/190 (6%)
 Frame = -1

Query: 537 IIKRLPVRSLVRCRSVSKAWKGLIDSLQFIAA---YSTRQTQPQHLLIRYGFTVGVEDQY 367
           I  RLPV+ L+RCR + K W  LI +  FI+    Y+       +L++R+      ++++
Sbjct: 13  IFLRLPVKQLLRCRCICKTWYSLISNHNFISTHSRYTIDSNNNNYLILRHYSRSNKKERF 72

Query: 366 ICFVDDDTFPQQKFVPTVPLSIEQLRYSRMVGCSSGLLCVCGYYLSPDNPDLNHANRIAI 187
               DDD    +      PL      Y  +VG  +G++C+   +        +H  +  +
Sbjct: 73  ALHFDDDDMFSEYQELDFPLE-SSWDYFEIVGSCNGIICLTDNH--------SHILKRIV 123

Query: 186 LWNPSIRKSVAIHVPNVENEKCVVHVLGFGVCPVTSDPKIVRIT---------SIHLKVE 34
           LWNPSI  SV + +  +  +   V VLGFG    T+D K++RI           +  +VE
Sbjct: 124 LWNPSIGLSVTLPLQRISYKVSNV-VLGFGFDSRTNDYKVIRIVYYSTNDDSLMVPPEVE 182

Query: 33  VYTLSTGEWR 4
           ++ LS G WR
Sbjct: 183 IFELSRGTWR 192


>ref|XP_003594188.1| F-box protein [Medicago truncatula] gi|87162697|gb|ABD28492.1|
           Cyclin-like F-box; F-box protein interaction domain;
           Galactose oxidase, central [Medicago truncatula]
           gi|355483236|gb|AES64439.1| F-box protein [Medicago
           truncatula]
          Length = 424

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 62/206 (30%), Positives = 100/206 (48%), Gaps = 27/206 (13%)
 Frame = -1

Query: 537 IIKRLPVRSLVRCRSVSKAWKGLIDSLQFIAAYSTRQTQPQHLLIRYGFTVGVEDQYICF 358
           I  RLPV+SL+R RS SK+ K LIDS  F   Y       + +++R+       D Y   
Sbjct: 14  IFSRLPVQSLLRFRSTSKSLKSLIDSHNFTNLYLKNNPLNRFIILRH-----KSDLYQLQ 68

Query: 357 VDDDTFPQQKFVP-------TVPLSIEQLRYSR---MVGCSSGLLCVCGYYLSPDNPDLN 208
           VDDD F  +  +P        + LS+  L+ +R   ++G  +GLL +    +   +P   
Sbjct: 69  VDDDDF-SKSMIPLNHPLSTNIMLSLFSLKGNRTFPLIGSCNGLLALSDGEIVFKHP--- 124

Query: 207 HANRIAILWNPSIRKS-----VAIHVPNVEN----EKCVVHVLGFGVCPVTSDPKIVRIT 55
           H      +WNP+ RK      + + +PN+E+     +  + V GFG  P T+D K++RIT
Sbjct: 125 HGVLETTIWNPNTRKDRTIPFIPLPIPNIEDSDNPNRGGICVHGFGFDPFTADYKLLRIT 184

Query: 54  SIHLK--------VEVYTLSTGEWRT 1
            +  +        V +++L T  W+T
Sbjct: 185 WLFARQNIFYDSHVSLFSLKTNSWKT 210


>ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|222839337|gb|EEE77674.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 57/196 (29%), Positives = 88/196 (44%), Gaps = 17/196 (8%)
 Frame = -1

Query: 537 IIKRLPVRSLVRCRSVSKAWKGLIDSLQFIAAYSTR---QTQPQH--LLIRYGFTVGVED 373
           I+ RLPV+ LVR + VSK W+ LI   +F+  +  R    T   H  + +     + ++ 
Sbjct: 16  ILSRLPVKCLVRFKCVSKTWRSLISHPEFVKNHLKRTKEDTNANHYKIFLSTDPHLSIDP 75

Query: 372 QYICFVDDDTFPQQ-KFVPTVPLSIEQLRYSRMVGCSSGLLCVCGYYLSPDNPDLNHANR 196
           +     DD+    Q KF    P+S  +  Y  ++G  +GL+C            L H N 
Sbjct: 76  EAYFDADDNLLTTQLKF----PVSYPEYSYIEILGSCNGLVC-----------GLIHDNP 120

Query: 195 IAILWNPSIRKSVAIHVPNVENEKCVVHVLGFGVCPVTSDPKIVRI-----------TSI 49
           +  +WNPS R+S  + +P    +       GFG      D KIVR+           ++ 
Sbjct: 121 LIYIWNPSTRESRELAIPGSSEDDA---FYGFGYDVKLDDYKIVRVSISTSTNSTDGSNS 177

Query: 48  HLKVEVYTLSTGEWRT 1
             KVEV+TL +  WRT
Sbjct: 178 ETKVEVFTLKSNIWRT 193


>emb|CBI40164.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 55/182 (30%), Positives = 91/182 (50%), Gaps = 7/182 (3%)
 Frame = -1

Query: 528 RLPVRSLVRCRSVSKAWKGLIDSLQFIAAYSTRQTQPQHLLIRYGFTVGVEDQYICFVDD 349
           RLPV+S+VR R V K+W  L D   FI+ +  + +   +  + +      E +      +
Sbjct: 31  RLPVKSIVRFRCVCKSWCTLFDDPDFISMHLRQASANSNGRLLFKHLSSSEQEIYSLRSN 90

Query: 348 DTFPQQKFVPTVPLSIEQLRYSRMVGCSSGLLCVCGYYLSPDNPDLNHANRIAILWNPSI 169
             F + + +  VP+   +  Y ++VG S+GL+C     L+  N   ++ +    LWNP+I
Sbjct: 91  IAFAEVRRL-EVPVP-SKTDYYQIVGSSNGLIC-----LTESNFKGSYLSLNLFLWNPAI 143

Query: 168 RKSVAI---HVPNVENEKCVVHVLGFGVCPVTSDPKIVRIT----SIHLKVEVYTLSTGE 10
           R+   +   H+ N  +   VV  LGF   PV +D K+VRI     +   + +VY+L TG 
Sbjct: 144 REFQTLPKYHINNFTSPLMVVG-LGFAFHPVINDYKVVRIVYFMRNKTSEADVYSLRTGS 202

Query: 9   WR 4
           WR
Sbjct: 203 WR 204


>gb|ADZ74124.1| S-haplotype-specific F-box protein [Prunus pseudocerasus]
          Length = 373

 Score = 68.9 bits (167), Expect = 5e-10
 Identities = 59/191 (30%), Positives = 88/191 (46%), Gaps = 13/191 (6%)
 Frame = -1

Query: 537 IIKRLPVRSLVRCRSVSKAWKGLIDSLQFIAAYSTRQ-TQPQHLLIR------YGFTVGV 379
           I+ RLP +SLVR     K+W  LI S  F++ +  R  T+  H+ +       +   V  
Sbjct: 14  ILVRLPAKSLVRFLCTCKSWSDLIGSPSFVSTHLYRNVTKHAHVYLLCLHHPDFERLVNP 73

Query: 378 EDQYICFVDD-DTFPQQKFVPTVPLS--IEQLRYSRMVGCSSGLLCVCGYYLSPDNPDLN 208
           +D Y+        F  + F     LS  +    Y  + G S+GL+C+    L+ D+P   
Sbjct: 74  DDPYVKKEFQWSLFSSETFEECYKLSHPLGNTEYYGIYGSSNGLVCISDEILNFDSP--- 130

Query: 207 HANRIAILWNPSIRKSVAIHVPNVENEKCVVHVLGFGVCPVTSDPKIVRITSIH---LKV 37
                  +WNPS+RK  A+ +    N K     L FG  P  +D KIVR+   +   L V
Sbjct: 131 -----IHIWNPSVRKFRALPMSTNINIKFGSVALQFGFHPRVNDYKIVRMLRTNKDALAV 185

Query: 36  EVYTLSTGEWR 4
           EVY+L T  W+
Sbjct: 186 EVYSLRTNSWK 196


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