BLASTX nr result

ID: Atractylodes22_contig00025890 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00025890
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA71369.1| chloride channel Stclc1 [Solanum tuberosum]           191   5e-47
ref|NP_199800.1| chloride channel protein CLC-c [Arabidopsis tha...   189   3e-46
ref|XP_002865761.1| CLC-C [Arabidopsis lyrata subsp. lyrata] gi|...   188   3e-46
gb|ADD09861.1| chloride channel C [Eutrema halophilum]                186   2e-45
dbj|BAD16425.1| chloride channel [Oryza sativa Japonica Group] g...   184   5e-45

>emb|CAA71369.1| chloride channel Stclc1 [Solanum tuberosum]
          Length = 764

 Score =  191 bits (485), Expect = 5e-47
 Identities = 103/164 (62%), Positives = 115/164 (70%)
 Frame = -2

Query: 493 KNFQCPPYHYNDLASLLLNTNDDAIRSLFSSLNANDFRITTLLVFFLAMFSLGIITYGIA 314
           KNFQCP  HYNDLASL LNTNDDAIR+LFSS N+N+F I+TLL+FF  ++ LGIITYGIA
Sbjct: 410 KNFQCPAGHYNDLASLFLNTNDDAIRNLFSSNNSNEFHISTLLIFFAGVYCLGIITYGIA 469

Query: 313 IPSGLFIPVILAGASYGRLVGTLLGSISNLNVXXXXXXXXXXXXXGTMRMTVSXXXXXXX 134
           IPSGLFIPVILAGASYGR+ G  LGS+SNLNV             GTMRMTVS       
Sbjct: 470 IPSGLFIPVILAGASYGRIFGRALGSLSNLNVGLFSLLGAASFLGGTMRMTVSICVILLE 529

Query: 133 XXXXXXXXXXXXXXXXVSKSVADNFNRGVYDQIVTMKGLPFLEA 2
                           +SK+VAD FN+GVYDQIV MKGLPFLEA
Sbjct: 530 LTNNLLMLPLVMLVLLISKTVADIFNKGVYDQIVKMKGLPFLEA 573


>ref|NP_199800.1| chloride channel protein CLC-c [Arabidopsis thaliana]
           gi|41688510|sp|Q96282.1|CLCC_ARATH RecName:
           Full=Chloride channel protein CLC-c; Short=AtCLC-c;
           AltName: Full=CBS domain-containing protein CBSCLC4
           gi|1655536|emb|CAA70310.1| chloride channel [Arabidopsis
           thaliana] gi|1742957|emb|CAA96059.1| CLC-c chloride
           channel protein [Arabidopsis thaliana]
           gi|8777420|dbj|BAA97010.1| chloride channel [Arabidopsis
           thaliana] gi|21539519|gb|AAM53312.1| chloride channel
           [Arabidopsis thaliana] gi|24899767|gb|AAN65098.1|
           chloride channel [Arabidopsis thaliana]
           gi|332008485|gb|AED95868.1| chloride channel protein
           CLC-c [Arabidopsis thaliana]
          Length = 779

 Score =  189 bits (479), Expect = 3e-46
 Identities = 100/163 (61%), Positives = 117/163 (71%)
 Frame = -2

Query: 493 KNFQCPPYHYNDLASLLLNTNDDAIRSLFSSLNANDFRITTLLVFFLAMFSLGIITYGIA 314
           K+FQCPP HYNDL+SLLLNTNDDAIR+LF+S + N+F I+TL +FF+A++ LGIITYGIA
Sbjct: 425 KSFQCPPNHYNDLSSLLLNTNDDAIRNLFTSRSENEFHISTLAIFFVAVYCLGIITYGIA 484

Query: 313 IPSGLFIPVILAGASYGRLVGTLLGSISNLNVXXXXXXXXXXXXXGTMRMTVSXXXXXXX 134
           IPSGLFIPVILAGASYGRLVG LLG +S L+V             GTMRMTVS       
Sbjct: 485 IPSGLFIPVILAGASYGRLVGRLLGPVSQLDVGLFSLLGAASFLGGTMRMTVSLCVILLE 544

Query: 133 XXXXXXXXXXXXXXXXVSKSVADNFNRGVYDQIVTMKGLPFLE 5
                           +SK+VAD FNRGVYDQIVTMKGLP++E
Sbjct: 545 LTNNLLMLPLVMLVLLISKTVADCFNRGVYDQIVTMKGLPYME 587


>ref|XP_002865761.1| CLC-C [Arabidopsis lyrata subsp. lyrata]
           gi|297311596|gb|EFH42020.1| CLC-C [Arabidopsis lyrata
           subsp. lyrata]
          Length = 778

 Score =  188 bits (478), Expect = 3e-46
 Identities = 100/163 (61%), Positives = 117/163 (71%)
 Frame = -2

Query: 493 KNFQCPPYHYNDLASLLLNTNDDAIRSLFSSLNANDFRITTLLVFFLAMFSLGIITYGIA 314
           K+FQCPP HYNDL+SLLLNTNDDAIR+LF+S + N+F I+TL +FF+A++ LGIITYGIA
Sbjct: 424 KSFQCPPNHYNDLSSLLLNTNDDAIRNLFTSRSENEFHISTLAIFFVAVYFLGIITYGIA 483

Query: 313 IPSGLFIPVILAGASYGRLVGTLLGSISNLNVXXXXXXXXXXXXXGTMRMTVSXXXXXXX 134
           IPSGLFIPVILAGASYGRLVG LLG +S L+V             GTMRMTVS       
Sbjct: 484 IPSGLFIPVILAGASYGRLVGRLLGPVSQLDVGLFSLLGAASFLGGTMRMTVSLCVILLE 543

Query: 133 XXXXXXXXXXXXXXXXVSKSVADNFNRGVYDQIVTMKGLPFLE 5
                           +SK+VAD FNRGVYDQIVTMKGLP++E
Sbjct: 544 LTNNLLMLPLVMLVLLISKTVADCFNRGVYDQIVTMKGLPYME 586


>gb|ADD09861.1| chloride channel C [Eutrema halophilum]
          Length = 775

 Score =  186 bits (472), Expect = 2e-45
 Identities = 99/163 (60%), Positives = 117/163 (71%)
 Frame = -2

Query: 493 KNFQCPPYHYNDLASLLLNTNDDAIRSLFSSLNANDFRITTLLVFFLAMFSLGIITYGIA 314
           K+FQCPP HYNDL+SLLLNTNDDAIRSLF+S + N+F+I+TL +FF+ ++ LGIITYGIA
Sbjct: 421 KSFQCPPNHYNDLSSLLLNTNDDAIRSLFTSRSENEFQISTLALFFVFIYCLGIITYGIA 480

Query: 313 IPSGLFIPVILAGASYGRLVGTLLGSISNLNVXXXXXXXXXXXXXGTMRMTVSXXXXXXX 134
           IPSGLFIPVILAGASYGRLVG LLG +S L+V             GTMRMTVS       
Sbjct: 481 IPSGLFIPVILAGASYGRLVGRLLGPVSQLDVGLFALLGAASFLGGTMRMTVSLCVILLE 540

Query: 133 XXXXXXXXXXXXXXXXVSKSVADNFNRGVYDQIVTMKGLPFLE 5
                           +SK+VAD FN+GVYDQIVTMKGLP++E
Sbjct: 541 LTNNLLMLPLVMLVLLISKTVADCFNKGVYDQIVTMKGLPYME 583


>dbj|BAD16425.1| chloride channel [Oryza sativa Japonica Group]
           gi|222623066|gb|EEE57198.1| hypothetical protein
           OsJ_07147 [Oryza sativa Japonica Group]
          Length = 804

 Score =  184 bits (468), Expect = 5e-45
 Identities = 94/164 (57%), Positives = 116/164 (70%)
 Frame = -2

Query: 493 KNFQCPPYHYNDLASLLLNTNDDAIRSLFSSLNANDFRITTLLVFFLAMFSLGIITYGIA 314
           KNFQCPP HYNDLASL  NTNDDAIR+LFS+   ++F ++TL +FF A++ LGI+TYG+A
Sbjct: 441 KNFQCPPGHYNDLASLFFNTNDDAIRNLFSNGTESEFHMSTLFIFFTAVYCLGILTYGVA 500

Query: 313 IPSGLFIPVILAGASYGRLVGTLLGSISNLNVXXXXXXXXXXXXXGTMRMTVSXXXXXXX 134
           +PSGLFIPVILAGA+YGR+VGTLLGSIS+L+              GTMRMTVS       
Sbjct: 501 VPSGLFIPVILAGATYGRIVGTLLGSISDLDPGLFALLGAASFLGGTMRMTVSVCVILLE 560

Query: 133 XXXXXXXXXXXXXXXXVSKSVADNFNRGVYDQIVTMKGLPFLEA 2
                           +SK++ADNFN+GVYDQIV MKGLP++EA
Sbjct: 561 LTNDLAMLPLVMLVLLISKTIADNFNKGVYDQIVVMKGLPYMEA 604


Top