BLASTX nr result
ID: Atractylodes22_contig00025865
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes22_contig00025865 (394 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002317075.1| predicted protein [Populus trichocarpa] gi|2... 64 1e-08 gb|ABA40425.1| unknown [Solanum tuberosum] gi|413968558|gb|AFW90... 64 2e-08 ref|XP_002299012.1| predicted protein [Populus trichocarpa] gi|1... 64 2e-08 ref|XP_002276595.1| PREDICTED: mRNA turnover protein 4 homolog [... 64 2e-08 ref|XP_002528622.1| mRNA turnover protein 4 mrt4, putative [Rici... 63 3e-08 >ref|XP_002317075.1| predicted protein [Populus trichocarpa] gi|222860140|gb|EEE97687.1| predicted protein [Populus trichocarpa] Length = 229 Score = 64.3 bits (155), Expect = 1e-08 Identities = 26/36 (72%), Positives = 33/36 (91%) Frame = -3 Query: 392 MGIKMATFKLHLLCRWSPEDFEAYQEGLEGSDIESS 285 +G KMATF+LHL+CRWSPEDFE Y+EGL+ SD+ES+ Sbjct: 194 LGTKMATFRLHLICRWSPEDFELYREGLDESDVESA 229 >gb|ABA40425.1| unknown [Solanum tuberosum] gi|413968558|gb|AFW90616.1| putative ribosomal protein L1 [Solanum tuberosum] Length = 229 Score = 63.5 bits (153), Expect = 2e-08 Identities = 27/36 (75%), Positives = 33/36 (91%) Frame = -3 Query: 392 MGIKMATFKLHLLCRWSPEDFEAYQEGLEGSDIESS 285 +G KMATF+LHL+CRWSP++FE Y+EGLE SDIESS Sbjct: 194 LGKKMATFRLHLICRWSPDEFEIYREGLEESDIESS 229 >ref|XP_002299012.1| predicted protein [Populus trichocarpa] gi|118486150|gb|ABK94918.1| unknown [Populus trichocarpa] gi|222846270|gb|EEE83817.1| predicted protein [Populus trichocarpa] Length = 229 Score = 63.5 bits (153), Expect = 2e-08 Identities = 26/36 (72%), Positives = 32/36 (88%) Frame = -3 Query: 392 MGIKMATFKLHLLCRWSPEDFEAYQEGLEGSDIESS 285 +G K ATFKLHL+CRWSPEDFE Y+EGL+ SD+ES+ Sbjct: 194 LGTKTATFKLHLICRWSPEDFELYREGLDDSDVESA 229 >ref|XP_002276595.1| PREDICTED: mRNA turnover protein 4 homolog [Vitis vinifera] gi|298204604|emb|CBI23879.3| unnamed protein product [Vitis vinifera] Length = 229 Score = 63.5 bits (153), Expect = 2e-08 Identities = 25/36 (69%), Positives = 34/36 (94%) Frame = -3 Query: 392 MGIKMATFKLHLLCRWSPEDFEAYQEGLEGSDIESS 285 +GIKMATF+LHL+CRWSP++F+ Y+EGL+ SD+ESS Sbjct: 194 LGIKMATFRLHLVCRWSPDEFDLYKEGLDDSDVESS 229 >ref|XP_002528622.1| mRNA turnover protein 4 mrt4, putative [Ricinus communis] gi|223531967|gb|EEF33780.1| mRNA turnover protein 4 mrt4, putative [Ricinus communis] Length = 182 Score = 62.8 bits (151), Expect = 3e-08 Identities = 25/36 (69%), Positives = 33/36 (91%) Frame = -3 Query: 392 MGIKMATFKLHLLCRWSPEDFEAYQEGLEGSDIESS 285 +GIKMATF+LHL+CRWSPEDFE Y+EG + SD++S+ Sbjct: 147 LGIKMATFRLHLICRWSPEDFELYREGQDESDVDSA 182