BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00025818
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [...    84   2e-14
emb|CBI31382.3| unnamed protein product [Vitis vinifera]               84   2e-14
ref|XP_002532622.1| Far upstream element-binding protein, putati...    77   2e-12
ref|NP_196063.1| binding to TOMV RNA 1L (long form) protein [Ara...    76   3e-12
dbj|BAD22893.1| KH domain-containing protein NOVA-like [Oryza sa...    67   1e-09

>ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [Vitis vinifera]
          Length = 309

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 43/80 (53%), Positives = 56/80 (70%)
 Frame = +1

Query: 1   DNNYIGLSDRLVTVIGTLPQLVQAINLILLKLSEDLYYVQSIGPPFPYAAPYNVPNYRPH 180
           DNNY+GL+DRLVT++G+L + ++AI+LIL KL+ED +Y Q +  PF YAA YN  NY P+
Sbjct: 159 DNNYLGLTDRLVTLMGSLEEQMRAIDLILSKLTEDPHYTQFMNAPFSYAAAYNSMNYGPN 218

Query: 181 GVGGKXXXXXXXXXKEDISN 240
           G GGK         KED SN
Sbjct: 219 GAGGK-----FQNNKEDRSN 233


>emb|CBI31382.3| unnamed protein product [Vitis vinifera]
          Length = 357

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 43/80 (53%), Positives = 56/80 (70%)
 Frame = +1

Query: 1   DNNYIGLSDRLVTVIGTLPQLVQAINLILLKLSEDLYYVQSIGPPFPYAAPYNVPNYRPH 180
           DNNY+GL+DRLVT++G+L + ++AI+LIL KL+ED +Y Q +  PF YAA YN  NY P+
Sbjct: 207 DNNYLGLTDRLVTLMGSLEEQMRAIDLILSKLTEDPHYTQFMNAPFSYAAAYNSMNYGPN 266

Query: 181 GVGGKXXXXXXXXXKEDISN 240
           G GGK         KED SN
Sbjct: 267 GAGGK-----FQNNKEDRSN 281


>ref|XP_002532622.1| Far upstream element-binding protein, putative [Ricinus communis]
           gi|223527642|gb|EEF29753.1| Far upstream element-binding
           protein, putative [Ricinus communis]
          Length = 314

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 37/65 (56%), Positives = 48/65 (73%)
 Frame = +1

Query: 1   DNNYIGLSDRLVTVIGTLPQLVQAINLILLKLSEDLYYVQSIGPPFPYAAPYNVPNYRPH 180
           DNN+ GL+DRLVTV GTL + ++AI+LIL KL +D +YVQ++  PF YA  YN  NY  +
Sbjct: 161 DNNFYGLNDRLVTVTGTLEEQMRAIDLILSKLYDDPHYVQTMHAPFSYAVAYNSMNYGAN 220

Query: 181 GVGGK 195
           G GGK
Sbjct: 221 GAGGK 225


>ref|NP_196063.1| binding to TOMV RNA 1L (long form) protein [Arabidopsis thaliana]
           gi|14030641|gb|AAK52995.1|AF375411_1 AT5g04430/T32M21_30
           [Arabidopsis thaliana] gi|7406447|emb|CAB85549.1|
           putative RNA-binding protein [Arabidopsis thaliana]
           gi|21554568|gb|AAM63617.1| putative RNA-binding protein
           [Arabidopsis thaliana] gi|23507775|gb|AAN38691.1|
           At5g04430/T32M21_30 [Arabidopsis thaliana]
           gi|332003361|gb|AED90744.1| binding to TOMV RNA 1L (long
           form) protein [Arabidopsis thaliana]
          Length = 313

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/65 (55%), Positives = 48/65 (73%)
 Frame = +1

Query: 1   DNNYIGLSDRLVTVIGTLPQLVQAINLILLKLSEDLYYVQSIGPPFPYAAPYNVPNYRPH 180
           DN + GLSDRLVT+ GT  + ++AI+LIL KL+ED +Y Q++  P+ YAA YN  NY P+
Sbjct: 160 DNTFYGLSDRLVTLSGTFEEQMRAIDLILAKLTEDDHYSQNVHSPYSYAAGYNSVNYAPN 219

Query: 181 GVGGK 195
           G GGK
Sbjct: 220 GSGGK 224


>dbj|BAD22893.1| KH domain-containing protein NOVA-like [Oryza sativa Japonica
           Group] gi|48716520|dbj|BAD23125.1| KH domain-containing
           protein NOVA-like [Oryza sativa Japonica Group]
          Length = 343

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 38/84 (45%), Positives = 48/84 (57%), Gaps = 19/84 (22%)
 Frame = +1

Query: 1   DNNYIGLSDRLVTVIGTLPQLVQAINLILLKLSEDLYYVQSIGPPFPYA----------- 147
           DNN++GL DRLVTV G L   ++AI LIL KLSED++Y  ++  PFPYA           
Sbjct: 164 DNNFVGLHDRLVTVTGPLDHQMRAIYLILSKLSEDVHYPPNLSSPFPYAGLGFPSYPGVP 223

Query: 148 -------APY-NVPNYRPHGVGGK 195
                   PY N  NY P+G GG+
Sbjct: 224 VGYMIPQVPYNNAVNYGPNGYGGR 247