BLASTX nr result

ID: Atractylodes22_contig00025785 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00025785
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523955.1| dead box ATP-dependent RNA helicase, putativ...   100   2e-19
ref|XP_002326066.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_002266157.1| PREDICTED: ATP-dependent RNA helicase DBP2 [...   100   2e-19
ref|XP_002319430.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_002960303.1| hypothetical protein SELMODRAFT_75384 [Selag...    78   8e-13

>ref|XP_002523955.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223536802|gb|EEF38442.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 564

 Score =  100 bits (248), Expect = 2e-19
 Identities = 55/106 (51%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
 Frame = +3

Query: 3   VHRIXXXXXXXXXXXXXXFYTDRDMFLVSQIRKAIADVQSGNTVAFATGKVXXXXXXXXX 182
           VHR+              FYTDRD+FLV+QI+KAIADV+SGNTVAFATGKV         
Sbjct: 459 VHRVGRTGRAGSAGQATSFYTDRDLFLVAQIKKAIADVKSGNTVAFATGKVARRKEREAA 518

Query: 183 XXXXXXXXXXSK-QPPTSINVEDKYKYMIAPAMMKKEGAADDAWDD 317
                     SK   PTSIN+EDKY++MIA +  K EG AD AWDD
Sbjct: 519 ASQKEARNDLSKLLGPTSINIEDKYRFMIASSNTKGEGVADSAWDD 564


>ref|XP_002326066.1| predicted protein [Populus trichocarpa] gi|222862941|gb|EEF00448.1|
           predicted protein [Populus trichocarpa]
          Length = 530

 Score =  100 bits (248), Expect = 2e-19
 Identities = 54/106 (50%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
 Frame = +3

Query: 3   VHRIXXXXXXXXXXXXXXFYTDRDMFLVSQIRKAIADVQSGNTVAFATGKVXXXXXXXXX 182
           VHRI              FYTDRD+FLV+QI+KAIADV+SGNTVAFATGK          
Sbjct: 425 VHRIGRTGRAGSTGQATSFYTDRDLFLVAQIKKAIADVESGNTVAFATGKAARRKEREAA 484

Query: 183 XXXXXXXXXXSK-QPPTSINVEDKYKYMIAPAMMKKEGAADDAWDD 317
                     SK    T IN+EDKY++MIAP+++  EGAAD AWDD
Sbjct: 485 ASQKEARNALSKVMGSTCINIEDKYRFMIAPSVITSEGAADSAWDD 530


>ref|XP_002266157.1| PREDICTED: ATP-dependent RNA helicase DBP2 [Vitis vinifera]
           gi|297745752|emb|CBI15808.3| unnamed protein product
           [Vitis vinifera]
          Length = 568

 Score =  100 bits (248), Expect = 2e-19
 Identities = 54/108 (50%), Positives = 65/108 (60%), Gaps = 3/108 (2%)
 Frame = +3

Query: 3   VHRIXXXXXXXXXXXXXXFYTDRDMFLVSQIRKAIADVQSGNTVAFATGKVXXXXXXXXX 182
           VHRI              FYTDRD+FLV+ IRKAIADV SGNTVAFATGKV         
Sbjct: 461 VHRIGRTGRAGSTGQATSFYTDRDVFLVAHIRKAIADVGSGNTVAFATGKVARKKEREAA 520

Query: 183 XXXXXXXXXXSK---QPPTSINVEDKYKYMIAPAMMKKEGAADDAWDD 317
                     S      PTS+N+E+KY++M++P+ +K EGAADDAWDD
Sbjct: 521 AAQKEARIALSNLSLMGPTSLNIEEKYRFMMSPSSIKTEGAADDAWDD 568


>ref|XP_002319430.1| predicted protein [Populus trichocarpa] gi|222857806|gb|EEE95353.1|
           predicted protein [Populus trichocarpa]
          Length = 559

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 51/107 (47%), Positives = 64/107 (59%), Gaps = 2/107 (1%)
 Frame = +3

Query: 3   VHRIXXXXXXXXXXXXXXFYTDRDMFLVSQIRKAIADVQSGNTVAFATGKVXXXXXXXXX 182
           VHRI              FYTD+D+FLV+QI+KAIADV+SGNTVAFATGK          
Sbjct: 453 VHRIGRTGRAGSTGQATSFYTDQDLFLVAQIKKAIADVESGNTVAFATGKTARRKEREAA 512

Query: 183 XXXXXXXXXXSKQ--PPTSINVEDKYKYMIAPAMMKKEGAADDAWDD 317
                       +   P  IN+EDKY++M+AP+++K EGAAD AWDD
Sbjct: 513 AALHKEARNDPSKVTGPACINIEDKYRFMMAPSIIKSEGAADSAWDD 559


>ref|XP_002960303.1| hypothetical protein SELMODRAFT_75384 [Selaginella moellendorffii]
           gi|302767980|ref|XP_002967410.1| hypothetical protein
           SELMODRAFT_168957 [Selaginella moellendorffii]
           gi|300165401|gb|EFJ32009.1| hypothetical protein
           SELMODRAFT_168957 [Selaginella moellendorffii]
           gi|300171242|gb|EFJ37842.1| hypothetical protein
           SELMODRAFT_75384 [Selaginella moellendorffii]
          Length = 575

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 43/109 (39%), Positives = 57/109 (52%), Gaps = 4/109 (3%)
 Frame = +3

Query: 3   VHRIXXXXXXXXXXXXXXFYTDRDMFLVSQIRKAIADVQSGNTVAFATGKVXXXXXXXXX 182
           VHRI               YTDRD FLV+QIRKAIA+ ++GN +AFATGK          
Sbjct: 467 VHRIGRTGRAGASGRATSLYTDRDAFLVAQIRKAIAEAEAGNVMAFATGKAARRKEREEA 526

Query: 183 XXXXXXXXXXSKQ----PPTSINVEDKYKYMIAPAMMKKEGAADDAWDD 317
                     +        T++ V+DKYK+M+  ++  K+G ADDAWDD
Sbjct: 527 AAFKEGRLTGTSGVGTFGSTTVRVDDKYKHMLVASVDPKKGVADDAWDD 575


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