BLASTX nr result

ID: Atractylodes22_contig00025771 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00025771
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310225.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_004170583.1| PREDICTED: succinate dehydrogenase [ubiquino...    73   2e-11
ref|XP_004149154.1| PREDICTED: succinate dehydrogenase [ubiquino...    73   2e-11
ref|XP_002327807.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11
ref|XP_002866741.1| succinate dehydrogenase 1-1 [Arabidopsis lyr...    68   7e-10

>ref|XP_002310225.1| predicted protein [Populus trichocarpa] gi|222853128|gb|EEE90675.1|
           predicted protein [Populus trichocarpa]
          Length = 633

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 39/75 (52%), Positives = 50/75 (66%), Gaps = 4/75 (5%)
 Frame = -2

Query: 214 WRCVSRAIRIP--SRRSTSADFLSH--RFFSSESNAGRSSYTIVDHTYDXXXXXXXXXXX 47
           WRCV+R +R+P  ++RS++  F SH  RFFS+++  GRSSYT+VDHTYD           
Sbjct: 2   WRCVARGLRLPCSTKRSSNDSFRSHISRFFSTDTTGGRSSYTVVDHTYDAVVVGAGGAGL 61

Query: 46  XXXXGLSEHGFNTAC 2
               GLSEHGFNTAC
Sbjct: 62  RAAIGLSEHGFNTAC 76


>ref|XP_004170583.1| PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein
           subunit 1, mitochondrial-like, partial [Cucumis sativus]
          Length = 186

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 41/77 (53%), Positives = 47/77 (61%), Gaps = 6/77 (7%)
 Frame = -2

Query: 214 WRCVSRAIRIPS---RRSTSADFLSH---RFFSSESNAGRSSYTIVDHTYDXXXXXXXXX 53
           WRCVSR +R  S   R+S+  D L     RFFS++S AGRSSYT+VDHTYD         
Sbjct: 2   WRCVSRGLRASSSFSRKSSPNDHLRSQFSRFFSADSTAGRSSYTVVDHTYDAVVVGAGGA 61

Query: 52  XXXXXXGLSEHGFNTAC 2
                 GLSEHGFNTAC
Sbjct: 62  GLRAAIGLSEHGFNTAC 78


>ref|XP_004149154.1| PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein
           subunit 1, mitochondrial-like [Cucumis sativus]
          Length = 635

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 41/77 (53%), Positives = 47/77 (61%), Gaps = 6/77 (7%)
 Frame = -2

Query: 214 WRCVSRAIRIPS---RRSTSADFLSH---RFFSSESNAGRSSYTIVDHTYDXXXXXXXXX 53
           WRCVSR +R  S   R+S+  D L     RFFS++S AGRSSYT+VDHTYD         
Sbjct: 2   WRCVSRGLRASSSFSRKSSPNDHLRSQFSRFFSADSTAGRSSYTVVDHTYDAVVVGAGGA 61

Query: 52  XXXXXXGLSEHGFNTAC 2
                 GLSEHGFNTAC
Sbjct: 62  GLRAAIGLSEHGFNTAC 78


>ref|XP_002327807.1| predicted protein [Populus trichocarpa] gi|222836892|gb|EEE75285.1|
           predicted protein [Populus trichocarpa]
          Length = 638

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 39/78 (50%), Positives = 46/78 (58%), Gaps = 7/78 (8%)
 Frame = -2

Query: 214 WRCVSRAIRIPSRRST-------SADFLSHRFFSSESNAGRSSYTIVDHTYDXXXXXXXX 56
           WRCV+R +R+PS  S+       S  F S RFFS++S  G SSYT+VDHTYD        
Sbjct: 2   WRCVARGLRLPSSSSSTKILSNDSFRFHSTRFFSADSTGGGSSYTVVDHTYDAVVVGAGG 61

Query: 55  XXXXXXXGLSEHGFNTAC 2
                  GLSEHGFNTAC
Sbjct: 62  AGLRAAIGLSEHGFNTAC 79


>ref|XP_002866741.1| succinate dehydrogenase 1-1 [Arabidopsis lyrata subsp. lyrata]
           gi|297312576|gb|EFH43000.1| succinate dehydrogenase 1-1
           [Arabidopsis lyrata subsp. lyrata]
          Length = 634

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 40/76 (52%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
 Frame = -2

Query: 214 WRCVSRAIRIPSRRSTSA-DFLS----HRFFSSESNAGRSSYTIVDHTYDXXXXXXXXXX 50
           WRCVSR  R PS +++S  D +S     RFFS+ S   RSSYTIVDHTYD          
Sbjct: 2   WRCVSRGFRAPSSKTSSLFDGVSGSRFSRFFSTGSTDTRSSYTIVDHTYDAVVVGAGGAG 61

Query: 49  XXXXXGLSEHGFNTAC 2
                GLSEHGFNTAC
Sbjct: 62  LRAAIGLSEHGFNTAC 77


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