BLASTX nr result
ID: Atractylodes22_contig00025771
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes22_contig00025771 (215 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002310225.1| predicted protein [Populus trichocarpa] gi|2... 77 1e-12 ref|XP_004170583.1| PREDICTED: succinate dehydrogenase [ubiquino... 73 2e-11 ref|XP_004149154.1| PREDICTED: succinate dehydrogenase [ubiquino... 73 2e-11 ref|XP_002327807.1| predicted protein [Populus trichocarpa] gi|2... 73 3e-11 ref|XP_002866741.1| succinate dehydrogenase 1-1 [Arabidopsis lyr... 68 7e-10 >ref|XP_002310225.1| predicted protein [Populus trichocarpa] gi|222853128|gb|EEE90675.1| predicted protein [Populus trichocarpa] Length = 633 Score = 77.4 bits (189), Expect = 1e-12 Identities = 39/75 (52%), Positives = 50/75 (66%), Gaps = 4/75 (5%) Frame = -2 Query: 214 WRCVSRAIRIP--SRRSTSADFLSH--RFFSSESNAGRSSYTIVDHTYDXXXXXXXXXXX 47 WRCV+R +R+P ++RS++ F SH RFFS+++ GRSSYT+VDHTYD Sbjct: 2 WRCVARGLRLPCSTKRSSNDSFRSHISRFFSTDTTGGRSSYTVVDHTYDAVVVGAGGAGL 61 Query: 46 XXXXGLSEHGFNTAC 2 GLSEHGFNTAC Sbjct: 62 RAAIGLSEHGFNTAC 76 >ref|XP_004170583.1| PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial-like, partial [Cucumis sativus] Length = 186 Score = 73.2 bits (178), Expect = 2e-11 Identities = 41/77 (53%), Positives = 47/77 (61%), Gaps = 6/77 (7%) Frame = -2 Query: 214 WRCVSRAIRIPS---RRSTSADFLSH---RFFSSESNAGRSSYTIVDHTYDXXXXXXXXX 53 WRCVSR +R S R+S+ D L RFFS++S AGRSSYT+VDHTYD Sbjct: 2 WRCVSRGLRASSSFSRKSSPNDHLRSQFSRFFSADSTAGRSSYTVVDHTYDAVVVGAGGA 61 Query: 52 XXXXXXGLSEHGFNTAC 2 GLSEHGFNTAC Sbjct: 62 GLRAAIGLSEHGFNTAC 78 >ref|XP_004149154.1| PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial-like [Cucumis sativus] Length = 635 Score = 73.2 bits (178), Expect = 2e-11 Identities = 41/77 (53%), Positives = 47/77 (61%), Gaps = 6/77 (7%) Frame = -2 Query: 214 WRCVSRAIRIPS---RRSTSADFLSH---RFFSSESNAGRSSYTIVDHTYDXXXXXXXXX 53 WRCVSR +R S R+S+ D L RFFS++S AGRSSYT+VDHTYD Sbjct: 2 WRCVSRGLRASSSFSRKSSPNDHLRSQFSRFFSADSTAGRSSYTVVDHTYDAVVVGAGGA 61 Query: 52 XXXXXXGLSEHGFNTAC 2 GLSEHGFNTAC Sbjct: 62 GLRAAIGLSEHGFNTAC 78 >ref|XP_002327807.1| predicted protein [Populus trichocarpa] gi|222836892|gb|EEE75285.1| predicted protein [Populus trichocarpa] Length = 638 Score = 72.8 bits (177), Expect = 3e-11 Identities = 39/78 (50%), Positives = 46/78 (58%), Gaps = 7/78 (8%) Frame = -2 Query: 214 WRCVSRAIRIPSRRST-------SADFLSHRFFSSESNAGRSSYTIVDHTYDXXXXXXXX 56 WRCV+R +R+PS S+ S F S RFFS++S G SSYT+VDHTYD Sbjct: 2 WRCVARGLRLPSSSSSTKILSNDSFRFHSTRFFSADSTGGGSSYTVVDHTYDAVVVGAGG 61 Query: 55 XXXXXXXGLSEHGFNTAC 2 GLSEHGFNTAC Sbjct: 62 AGLRAAIGLSEHGFNTAC 79 >ref|XP_002866741.1| succinate dehydrogenase 1-1 [Arabidopsis lyrata subsp. lyrata] gi|297312576|gb|EFH43000.1| succinate dehydrogenase 1-1 [Arabidopsis lyrata subsp. lyrata] Length = 634 Score = 68.2 bits (165), Expect = 7e-10 Identities = 40/76 (52%), Positives = 45/76 (59%), Gaps = 5/76 (6%) Frame = -2 Query: 214 WRCVSRAIRIPSRRSTSA-DFLS----HRFFSSESNAGRSSYTIVDHTYDXXXXXXXXXX 50 WRCVSR R PS +++S D +S RFFS+ S RSSYTIVDHTYD Sbjct: 2 WRCVSRGFRAPSSKTSSLFDGVSGSRFSRFFSTGSTDTRSSYTIVDHTYDAVVVGAGGAG 61 Query: 49 XXXXXGLSEHGFNTAC 2 GLSEHGFNTAC Sbjct: 62 LRAAIGLSEHGFNTAC 77