BLASTX nr result

ID: Atractylodes22_contig00025605 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00025605
         (1102 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283925.1| PREDICTED: cellular nucleic acid-binding pro...   424   e-116
gb|AAQ89709.1| putative zinc finger protein [Hyacinthus orientalis]   355   8e-96
ref|XP_002510478.1| cellular nucleic acid binding protein, putat...   347   2e-93
ref|XP_004148537.1| PREDICTED: DNA-binding protein HEXBP-like [C...   346   5e-93
ref|XP_003603999.1| Cellular nucleic acid-binding protein [Medic...   342   7e-92

>ref|XP_002283925.1| PREDICTED: cellular nucleic acid-binding protein [Vitis vinifera]
            gi|296086261|emb|CBI31702.3| unnamed protein product
            [Vitis vinifera]
          Length = 238

 Score =  424 bits (1090), Expect = e-116
 Identities = 189/258 (73%), Positives = 208/258 (80%)
 Frame = -2

Query: 1020 MSRDRSRSPGLAKRFRSRDRASYRDAPYKRDRPTYRQDYLCNKCKRPGHFARDCPNVTVC 841
            M+ DRSRSP  AKR RS DRASY+DAPY RD   +RQDYLCNKCKRPGHFARDCPNVTVC
Sbjct: 1    MTLDRSRSPPQAKRLRSSDRASYQDAPYPRDHRVHRQDYLCNKCKRPGHFARDCPNVTVC 60

Query: 840  NNCGLPGHIAAECTSTTMCWNCKESGHLSSECPNDPVCHMCGKVGHLARDCHNPSVSSYD 661
            NNCGLPGHIAAEC STTMCWNCKESGHL+S+CPNDPVCHMCGK+GHLARDC +P + ++D
Sbjct: 61   NNCGLPGHIAAECNSTTMCWNCKESGHLASQCPNDPVCHMCGKMGHLARDCSSPGLPAHD 120

Query: 660  ARLCNNCYKPGHIAADCTNEKACNNCRKTGHLARDCHNDPVCNICSISGHVARQCPKSGL 481
            ARLCNNCYKPGHIAADCTNEKACNNC KTGHLARDC N+PVCNIC+ISGHVARQCPKS L
Sbjct: 121  ARLCNNCYKPGHIAADCTNEKACNNCHKTGHLARDCLNEPVCNICNISGHVARQCPKSRL 180

Query: 480  SSLSGPVKHXXXXXXXXXXXXXXMDDPFRDMICRNCGRPGHISRDCVPMVICSNCGGRGH 301
               +G                     PFRD+ C NCG+PGHISRDCV +VIC+NCGGRGH
Sbjct: 181  VPETG--------------------GPFRDITCHNCGQPGHISRDCVSIVICNNCGGRGH 220

Query: 300  QEIECPSARMYDPFDRAF 247
            Q  ECPS RM+D   R +
Sbjct: 221  QSFECPSVRMFDHVVRRY 238


>gb|AAQ89709.1| putative zinc finger protein [Hyacinthus orientalis]
          Length = 244

 Score =  355 bits (912), Expect = 8e-96
 Identities = 159/256 (62%), Positives = 186/256 (72%), Gaps = 4/256 (1%)
 Frame = -2

Query: 1020 MSRDRSRSPGLAKRFRS-RDRASYRDAPYKRD---RPTYRQDYLCNKCKRPGHFARDCPN 853
            MS D SRSP   +RFRS RDR S+R  PY+RD      +RQD +C  CKRPGHFARDC +
Sbjct: 1    MSPDSSRSPPRTRRFRSERDRPSHRVTPYRRDPREHRGFRQDVICKNCKRPGHFARDCSH 60

Query: 852  VTVCNNCGLPGHIAAECTSTTMCWNCKESGHLSSECPNDPVCHMCGKVGHLARDCHNPSV 673
            + VCNNCGLPGHIAAECT+ T+CWNCKE GH+++EC N+ VCH C K GHLARDC    +
Sbjct: 61   IAVCNNCGLPGHIAAECTAKTLCWNCKEPGHMANECSNEAVCHNCNKTGHLARDCSASGL 120

Query: 672  SSYDARLCNNCYKPGHIAADCTNEKACNNCRKTGHLARDCHNDPVCNICSISGHVARQCP 493
            SS+D RLCNNC++PGHIAADCTN+K CNNCRK GHLAR+C NDPVCN+C++SGHVARQCP
Sbjct: 121  SSFDTRLCNNCHRPGHIAADCTNDKTCNNCRKPGHLARECTNDPVCNVCNVSGHVARQCP 180

Query: 492  KSGLSSLSGPVKHXXXXXXXXXXXXXXMDDPFRDMICRNCGRPGHISRDCVPMVICSNCG 313
            KS L S                        PFRD+ICR C +PGHISRDCV +VIC+ CG
Sbjct: 181  KSNLPS-------------------EIHGGPFRDIICRVCNQPGHISRDCVGIVICNTCG 221

Query: 312  GRGHQEIECPSARMYD 265
            GRGH   ECPS R+ D
Sbjct: 222  GRGHMAYECPSGRLLD 237


>ref|XP_002510478.1| cellular nucleic acid binding protein, putative [Ricinus communis]
            gi|223551179|gb|EEF52665.1| cellular nucleic acid binding
            protein, putative [Ricinus communis]
          Length = 256

 Score =  347 bits (891), Expect = 2e-93
 Identities = 163/277 (58%), Positives = 193/277 (69%), Gaps = 2/277 (0%)
 Frame = -2

Query: 1047 SESTN*GCNMSRDRSRSPGLAKRFRSRDRASYRDAPYKRD-RPTYRQDYLCNKCKRPGHF 871
            S S +   +MSR RSRSP   +R RSR R SYRDAPY+R+ R  + Q  LCN CKRPGHF
Sbjct: 5    SRSNSRSRSMSRSRSRSPR-DRRIRSR-RNSYRDAPYRRETRRGFSQSSLCNNCKRPGHF 62

Query: 870  ARDCPNVTVCNNCGLPGHIAAECTSTTMCWNCKESGHLSSECPNDPVCHMCGKVGHLARD 691
            AR+CPNV VCNNCGLPGHIAAECT+ + CWNC+E GH++S CPN+ +CH CGK GH ARD
Sbjct: 63   ARECPNVAVCNNCGLPGHIAAECTTQSRCWNCREPGHVASNCPNEGICHSCGKSGHRARD 122

Query: 690  CHNPSVSSYDARLCNNCYKPGHIAADCTNEKACNNCRKTGHLARDCHNDPVCNICSISGH 511
            C  P +   D RLCNNCYKPGHIAA CTN+KAC NCRKTGH+ARDC N+PVCN C+I+GH
Sbjct: 123  CSTPDMPPGDLRLCNNCYKPGHIAAQCTNDKACKNCRKTGHVARDCQNEPVCNFCNIAGH 182

Query: 510  VARQCPKSGLSSLSGPVKHXXXXXXXXXXXXXXMDDPFRDMICRNCGRPGHISRDCV-PM 334
            VARQCPK  + +  G                    + +RD+ICR C + GH+SRDC+ PM
Sbjct: 183  VARQCPKVDIHAERG---------------GWGRHNGYRDLICRTCNQVGHMSRDCIGPM 227

Query: 333  VICSNCGGRGHQEIECPSARMYDPFDRAFLDPRFRRY 223
            +IC NCGGRGH+  ECPS R        F D  FRRY
Sbjct: 228  IICHNCGGRGHRAFECPSGR--------FSDRGFRRY 256


>ref|XP_004148537.1| PREDICTED: DNA-binding protein HEXBP-like [Cucumis sativus]
            gi|449519884|ref|XP_004166964.1| PREDICTED: DNA-binding
            protein HEXBP-like [Cucumis sativus]
          Length = 260

 Score =  346 bits (888), Expect = 5e-93
 Identities = 156/259 (60%), Positives = 189/259 (72%), Gaps = 2/259 (0%)
 Frame = -2

Query: 1017 SRDRSRSPGLAKRFRSRDRASYRDAPYKRD-RPTYRQDYLCNKCKRPGHFARDCPNVTVC 841
            SR RSRSP L ++ RS DR SYRDAPY+R+ R  + +D LC  CKRPGHFAR+CPNV +C
Sbjct: 9    SRSRSRSP-LDRKIRS-DRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAIC 66

Query: 840  NNCGLPGHIAAECTSTTMCWNCKESGHLSSECPNDPVCHMCGKVGHLARDCHNPSVSSYD 661
            +NCGLPGHIA+ECT+ ++CWNC+E GH++S CPN+ +CH CGK GH ARDC  P +   D
Sbjct: 67   HNCGLPGHIASECTTKSLCWNCREPGHMASSCPNEGICHTCGKAGHRARDCTAPPMPPGD 126

Query: 660  ARLCNNCYKPGHIAADCTNEKACNNCRKTGHLARDCHNDPVCNICSISGHVARQCPKSGL 481
             RLCNNCYK GHIAADCTNEKACNNCRKTGHLARDC NDP+CN+C++SGHVARQCPKS +
Sbjct: 127  LRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNV 186

Query: 480  SSLSGPVKHXXXXXXXXXXXXXXMDDPFRDMICRNCGRPGHISRDCV-PMVICSNCGGRG 304
                G                      +RD++CRNC + GH+SRDC+ P++IC NCGGRG
Sbjct: 187  LGDRG-----DRGISSGGGSGRGSGSGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRG 241

Query: 303  HQEIECPSARMYDPFDRAF 247
            H   ECPS R  D F R +
Sbjct: 242  HLAYECPSGRFMDRFPRRY 260


>ref|XP_003603999.1| Cellular nucleic acid-binding protein [Medicago truncatula]
            gi|355493047|gb|AES74250.1| Cellular nucleic acid-binding
            protein [Medicago truncatula] gi|388502654|gb|AFK39393.1|
            unknown [Medicago truncatula]
          Length = 269

 Score =  342 bits (878), Expect = 7e-92
 Identities = 155/265 (58%), Positives = 193/265 (72%), Gaps = 2/265 (0%)
 Frame = -2

Query: 1047 SESTN*GCNMSRDRSRSPGLAKRFRSRDRASYRDAPYKRDRPT-YRQDYLCNKCKRPGHF 871
            S S +   + SR RSRSPG+ K  RS DR SYRDAPY+RD    + +D LC  CKRPGH+
Sbjct: 5    SRSRSRSRSRSRSRSRSPGIRK-IRS-DRHSYRDAPYRRDSSRGFSRDNLCKNCKRPGHY 62

Query: 870  ARDCPNVTVCNNCGLPGHIAAECTSTTMCWNCKESGHLSSECPNDPVCHMCGKVGHLARD 691
            AR+CPNV VC+NCGLPGHIA+EC++ ++CWNCKESGH++S CPN+ +CH CGK GH AR+
Sbjct: 63   ARECPNVAVCHNCGLPGHIASECSTKSVCWNCKESGHMASNCPNEGICHTCGKTGHRARE 122

Query: 690  CHNPSVSSYDARLCNNCYKPGHIAADCTNEKACNNCRKTGHLARDCHNDPVCNICSISGH 511
            C  PS+   D RLC+NCYK GHIAA+CTNEKACNNCRKTGHLARDC NDP+CN+C++SGH
Sbjct: 123  CSAPSLPPGDLRLCHNCYKQGHIAAECTNEKACNNCRKTGHLARDCPNDPICNVCNVSGH 182

Query: 510  VARQCPKSGLSSLSGPVKHXXXXXXXXXXXXXXMDDPFRDMICRNCGRPGHISRDCV-PM 334
            +ARQCPK   S + G  +                   +RD++CRNC + GH+SRDC+ P+
Sbjct: 183  LARQCPK---SDVIGDHRGRGSFRGAGGGVAAGGGGGYRDVVCRNCQQFGHMSRDCMGPL 239

Query: 333  VICSNCGGRGHQEIECPSARMYDPF 259
            +IC NCGGRGH   ECPS R  D +
Sbjct: 240  MICHNCGGRGHLAYECPSGRFVDRY 264


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