BLASTX nr result

ID: Atractylodes22_contig00025539 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00025539
         (783 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34928.3| unnamed protein product [Vitis vinifera]              239   5e-61
ref|XP_002278403.1| PREDICTED: protein farnesyltransferase subun...   239   5e-61
ref|XP_002517336.1| protein farnesyltransferase beta subunit, pu...   231   2e-58
gb|AAB38796.1| farnesyltransferase beta subunit, partial [Nicoti...   225   1e-56
ref|XP_003542689.1| PREDICTED: protein farnesyltransferase subun...   215   1e-53

>emb|CBI34928.3| unnamed protein product [Vitis vinifera]
          Length = 421

 Score =  239 bits (610), Expect = 5e-61
 Identities = 122/207 (58%), Positives = 144/207 (69%), Gaps = 13/207 (6%)
 Frame = +3

Query: 3   MILINEVNRLDLASLTDWLVFRQGVEGGFQGRTNKLVDGCYSFWQGGAAVLRQTLHAAAG 182
           M+LI EVNRLDL SL DW+VFRQGVEGGFQGRTNKLVDGCYSFWQGG   L Q LH+   
Sbjct: 213 MVLIGEVNRLDLTSLIDWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALIQKLHSIIE 272

Query: 183 E-------GHNXXXXXXXXXXXXXXXXXXXXXXXXQVNSSSIQRNI-----EVEPLFQSH 326
           E       G +                            S+I  N      E+EPLF S 
Sbjct: 273 EQLRLLDAGGSAIDSPQLASISCHSGKRGLHDTSGSAKFSNIGFNFLKEPAEMEPLFHSI 332

Query: 327 ALQQYVLLCSQM-EGGFRDKPGKSRDHYHTCYCLSGLAAAQYSWSKDAESPPLPRSVLGP 503
           ALQQY++LCSQ+ EGGFRDKPGK RD+YHTCYCLSGL+ AQYS+SKDA+SPPLPR+V GP
Sbjct: 333 ALQQYIILCSQLQEGGFRDKPGKHRDYYHTCYCLSGLSVAQYSYSKDADSPPLPRAVFGP 392

Query: 504 YSNILEPINPLYNIVLEQYNEARKFFT 584
           YSN+LEPI+PLYN++L+ Y+EA +FF+
Sbjct: 393 YSNLLEPIHPLYNVILDLYHEAHEFFS 419


>ref|XP_002278403.1| PREDICTED: protein farnesyltransferase subunit beta-like isoform 1
           [Vitis vinifera]
          Length = 438

 Score =  239 bits (610), Expect = 5e-61
 Identities = 122/207 (58%), Positives = 144/207 (69%), Gaps = 13/207 (6%)
 Frame = +3

Query: 3   MILINEVNRLDLASLTDWLVFRQGVEGGFQGRTNKLVDGCYSFWQGGAAVLRQTLHAAAG 182
           M+LI EVNRLDL SL DW+VFRQGVEGGFQGRTNKLVDGCYSFWQGG   L Q LH+   
Sbjct: 230 MVLIGEVNRLDLTSLIDWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALIQKLHSIIE 289

Query: 183 E-------GHNXXXXXXXXXXXXXXXXXXXXXXXXQVNSSSIQRNI-----EVEPLFQSH 326
           E       G +                            S+I  N      E+EPLF S 
Sbjct: 290 EQLRLLDAGGSAIDSPQLASISCHSGKRGLHDTSGSAKFSNIGFNFLKEPAEMEPLFHSI 349

Query: 327 ALQQYVLLCSQM-EGGFRDKPGKSRDHYHTCYCLSGLAAAQYSWSKDAESPPLPRSVLGP 503
           ALQQY++LCSQ+ EGGFRDKPGK RD+YHTCYCLSGL+ AQYS+SKDA+SPPLPR+V GP
Sbjct: 350 ALQQYIILCSQLQEGGFRDKPGKHRDYYHTCYCLSGLSVAQYSYSKDADSPPLPRAVFGP 409

Query: 504 YSNILEPINPLYNIVLEQYNEARKFFT 584
           YSN+LEPI+PLYN++L+ Y+EA +FF+
Sbjct: 410 YSNLLEPIHPLYNVILDLYHEAHEFFS 436


>ref|XP_002517336.1| protein farnesyltransferase beta subunit, putative [Ricinus
           communis] gi|223543347|gb|EEF44878.1| protein
           farnesyltransferase beta subunit, putative [Ricinus
           communis]
          Length = 438

 Score =  231 bits (588), Expect = 2e-58
 Identities = 118/204 (57%), Positives = 137/204 (67%), Gaps = 10/204 (4%)
 Frame = +3

Query: 3   MILINEVNRLDLASLTDWLVFRQGVEGGFQGRTNKLVDGCYSFWQGGAAVLRQTLHAAAG 182
           MILINEVNRLDL+SL +W+VFRQGVE GFQGRTNKLVDGCYSFWQGG   L Q L +  G
Sbjct: 234 MILINEVNRLDLSSLINWVVFRQGVECGFQGRTNKLVDGCYSFWQGGVFALLQRLRSIGG 293

Query: 183 E---------GHNXXXXXXXXXXXXXXXXXXXXXXXXQVNSSSIQRNIEVEPLFQSHALQ 335
           E         GH                         +     +       PLF S ALQ
Sbjct: 294 EHAAFSDAEAGHCATESSSEDEGTDGDSTDVDEPGHFKQGGHGV-----TVPLFHSSALQ 348

Query: 336 QYVLLCSQ-MEGGFRDKPGKSRDHYHTCYCLSGLAAAQYSWSKDAESPPLPRSVLGPYSN 512
           QY++LCSQ  EGGFRDKPGK+RD+YHTCYCLSGL+  QYSWSKD  SPPLPR+VLGPYSN
Sbjct: 349 QYIILCSQEQEGGFRDKPGKARDYYHTCYCLSGLSVCQYSWSKDENSPPLPRAVLGPYSN 408

Query: 513 ILEPINPLYNIVLEQYNEARKFFT 584
           +LEPI+PLYN+V +QY+ A +FF+
Sbjct: 409 LLEPIHPLYNVVSKQYDGAHEFFS 432


>gb|AAB38796.1| farnesyltransferase beta subunit, partial [Nicotiana glutinosa]
          Length = 446

 Score =  225 bits (573), Expect = 1e-56
 Identities = 118/223 (52%), Positives = 136/223 (60%), Gaps = 29/223 (13%)
 Frame = +3

Query: 3   MILINEVNRLDLASLTDWLVFRQGVEGGFQGRTNKLVDGCYSFWQGGAAVLRQTLHAAAG 182
           MILINE NRLDL  L DW+VFRQGVEGGFQGRTNKLVDGCYSFWQ   A L Q L +   
Sbjct: 222 MILINEANRLDLPRLIDWVVFRQGVEGGFQGRTNKLVDGCYSFWQAAVAFLIQRLKSTVH 281

Query: 183 EGHNXXXXXXXXXXXXXXXXXXXXXXXXQVNSSSIQ------------------------ 290
           E                           Q  SS +Q                        
Sbjct: 282 EQLGLSNELSTESADDSSESELSDEEHLQGTSSHVQKTCPLGQEGQENASDPTKIADTGY 341

Query: 291 ----RNIEVEPLFQSHALQQYVLLCSQMEGGFRDKPGKSRDHYHTCYCLSGLAAAQYSWS 458
               R I + P+F S  LQQYVLLCSQ++GGFRDKPGK RDHYHTCYCLSGL+ AQYSW+
Sbjct: 342 DFVNRTIAMRPVFDSFYLQQYVLLCSQIDGGFRDKPGKGRDHYHTCYCLSGLSIAQYSWT 401

Query: 459 KDAESPPLPRSVLGPYS-NILEPINPLYNIVLEQYNEARKFFT 584
            +A++PPLPR V GPYS N+LE I+PLYN+VL++Y EAR FF+
Sbjct: 402 NEADAPPLPRDVFGPYSQNLLEQIHPLYNVVLDRYYEARSFFS 444


>ref|XP_003542689.1| PREDICTED: protein farnesyltransferase subunit beta [Glycine max]
          Length = 455

 Score =  215 bits (547), Expect = 1e-53
 Identities = 116/213 (54%), Positives = 131/213 (61%), Gaps = 20/213 (9%)
 Frame = +3

Query: 3   MILINEVNRLDLASLTDWLVFRQGVEGGFQGRTNKLVDGCYSFWQGGAAVLRQTLHAAAG 182
           MILI EVN LDL  L DW+VFRQG E GFQGRTNKLVDGCYSFWQGGA  L Q L +   
Sbjct: 239 MILIGEVNHLDLPRLVDWVVFRQGKECGFQGRTNKLVDGCYSFWQGGAVALLQRLSSIIN 298

Query: 183 EGHNXXXXXXXXXXXXXXXXXXXXXXXXQV----------NSSSIQRNIEV--------- 305
           +                                       +SSS  +NI           
Sbjct: 299 KQMEETSQIFAVSYVSEAKESLDGTSSHATCRGEHEGTSESSSSDFKNIAYKFINEWRAQ 358

Query: 306 EPLFQSHALQQYVLLCSQ-MEGGFRDKPGKSRDHYHTCYCLSGLAAAQYSWSKDAESPPL 482
           EPLF S ALQQY+LLC+Q  EGG RDKPGK RDHYHTCYCLSGL+  QYSWSK  +SPPL
Sbjct: 359 EPLFHSIALQQYILLCAQEQEGGLRDKPGKRRDHYHTCYCLSGLSLCQYSWSKHPDSPPL 418

Query: 483 PRSVLGPYSNILEPINPLYNIVLEQYNEARKFF 581
           P  VLGPYSN+LEPI+PL+N+VL +Y EA +FF
Sbjct: 419 PNLVLGPYSNLLEPIHPLFNVVLGRYREAHEFF 451


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