BLASTX nr result

ID: Atractylodes22_contig00024981 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00024981
         (1092 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634836.1| PREDICTED: poly(A)-specific ribonuclease PAR...   292   9e-77
emb|CBI35579.3| unnamed protein product [Vitis vinifera]              292   9e-77
ref|XP_003532241.1| PREDICTED: poly(A)-specific ribonuclease PAR...   285   2e-74
ref|XP_002527264.1| ribonuclease, putative [Ricinus communis] gi...   282   9e-74
ref|XP_002321239.1| predicted protein [Populus trichocarpa] gi|2...   276   8e-72

>ref|XP_003634836.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Vitis vinifera]
          Length = 515

 Score =  292 bits (748), Expect = 9e-77
 Identities = 163/302 (53%), Positives = 206/302 (68%), Gaps = 12/302 (3%)
 Frame = +1

Query: 1    VVAHKSLNDFTFIHSKFLAPLPPTMDEFRSSLLSAFPNILDVNHLMKEIGPLNEYSNLPA 180
            VV+H SLN+F FIHSKFL+PLPP MDEF  SL   FP++LDVNHLMKEIGPL + +NL A
Sbjct: 218  VVSHNSLNEFAFIHSKFLSPLPPNMDEFMCSLRMVFPHVLDVNHLMKEIGPLKKVTNLSA 277

Query: 181  AISYLKRNFFAPIEIEIPQKASMEESKNHGHNVVRISELFAKLCFILKITPE-TEHHNPD 357
            A S LKR FF PI++EIP +AS  E K HGHNV++IS L A LC ILKITPE  +     
Sbjct: 278  AASCLKRRFFVPIDMEIPHQAS-NEDKIHGHNVLKISHLLANLCSILKITPEMIQSDGGH 336

Query: 358  GPSTLKRYSNVFNLGSNSFQDSNEGDDISVWTHNPRKISIDNLVFLWGFRSGISAGNLKN 537
              S L+ Y+N+F+  S + +D  +G  I VWT + RK+S + LVF+WGFR  +SAG LK 
Sbjct: 337  LASALEGYANIFHPHSTNTEDPIDG-GIKVWTDDTRKVSSEGLVFIWGFRGRMSAGGLKR 395

Query: 538  LLCKSHDALSKDHVFDVRLVDKNCAVVVFWKTGLSEWFLSAIDS---GDDLRELVAEGLM 708
            LL  SH   S++  FDVR+VD +CA+VVFW++GLS+ FL AI S      LRE+V+EGL 
Sbjct: 396  LLQGSHSVFSEE--FDVRMVDGSCAIVVFWQSGLSQTFLEAISSNWISGLLREMVSEGLR 453

Query: 709  AAGYEAYKRVCKSEILGADLADS----LAEFDRVSEAHTEES----AEIYWNNELMINFD 864
            AAGYE YK  C+     ADLADS    L E D  SEA +E      ++IYW+ + +IN D
Sbjct: 454  AAGYETYKNACRLGFWEADLADSLDKALEEPDHNSEADSEAKPTGPSQIYWSRDSIINLD 513

Query: 865  DL 870
            +L
Sbjct: 514  EL 515


>emb|CBI35579.3| unnamed protein product [Vitis vinifera]
          Length = 6458

 Score =  292 bits (748), Expect = 9e-77
 Identities = 163/302 (53%), Positives = 206/302 (68%), Gaps = 12/302 (3%)
 Frame = +1

Query: 1    VVAHKSLNDFTFIHSKFLAPLPPTMDEFRSSLLSAFPNILDVNHLMKEIGPLNEYSNLPA 180
            VV+H SLN+F FIHSKFL+PLPP MDEF  SL   FP++LDVNHLMKEIGPL + +NL A
Sbjct: 6161 VVSHNSLNEFAFIHSKFLSPLPPNMDEFMCSLRMVFPHVLDVNHLMKEIGPLKKVTNLSA 6220

Query: 181  AISYLKRNFFAPIEIEIPQKASMEESKNHGHNVVRISELFAKLCFILKITPE-TEHHNPD 357
            A S LKR FF PI++EIP +AS  E K HGHNV++IS L A LC ILKITPE  +     
Sbjct: 6221 AASCLKRRFFVPIDMEIPHQAS-NEDKIHGHNVLKISHLLANLCSILKITPEMIQSDGGH 6279

Query: 358  GPSTLKRYSNVFNLGSNSFQDSNEGDDISVWTHNPRKISIDNLVFLWGFRSGISAGNLKN 537
              S L+ Y+N+F+  S + +D  +G  I VWT + RK+S + LVF+WGFR  +SAG LK 
Sbjct: 6280 LASALEGYANIFHPHSTNTEDPIDG-GIKVWTDDTRKVSSEGLVFIWGFRGRMSAGGLKR 6338

Query: 538  LLCKSHDALSKDHVFDVRLVDKNCAVVVFWKTGLSEWFLSAIDS---GDDLRELVAEGLM 708
            LL  SH   S++  FDVR+VD +CA+VVFW++GLS+ FL AI S      LRE+V+EGL 
Sbjct: 6339 LLQGSHSVFSEE--FDVRMVDGSCAIVVFWQSGLSQTFLEAISSNWISGLLREMVSEGLR 6396

Query: 709  AAGYEAYKRVCKSEILGADLADS----LAEFDRVSEAHTEES----AEIYWNNELMINFD 864
            AAGYE YK  C+     ADLADS    L E D  SEA +E      ++IYW+ + +IN D
Sbjct: 6397 AAGYETYKNACRLGFWEADLADSLDKALEEPDHNSEADSEAKPTGPSQIYWSRDSIINLD 6456

Query: 865  DL 870
            +L
Sbjct: 6457 EL 6458


>ref|XP_003532241.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Glycine max]
          Length = 619

 Score =  285 bits (728), Expect = 2e-74
 Identities = 146/299 (48%), Positives = 211/299 (70%), Gaps = 9/299 (3%)
 Frame = +1

Query: 1    VVAHKSLNDFTFIHSKFLAPLPPTMDEFRSSLLSAFPNILDVNHLMKEIGPLNEYSNLPA 180
            V++H  LND T IHSKF+APLPP +DEF SSL S FP +LD+N+LMK+ G + + +N+P+
Sbjct: 323  VISHNCLNDCTLIHSKFIAPLPPEIDEFVSSLCSVFPEVLDINYLMKKHGTMRKVTNIPS 382

Query: 181  AISYLKRNFFAPIEIEIPQKASMEESKNHGHNVVRISELFAKLCFILKITPE-TEHHNPD 357
            AISYL  +FFAP+++EIP +A+++E K HG   +R+S LF KLC ILKI+P  TE  N  
Sbjct: 383  AISYLNNHFFAPVDLEIPDQATVKEGKIHGLTALRLSYLFMKLCSILKISPNVTESGNKH 442

Query: 358  GPSTLKRYSNVFNLGSNSFQDSNEGDDISVWTHNPRKISIDNLVFLWGFRSGISAGNLKN 537
                L+ ++NVF+  S   QDS  G D+ +WT+N +K+S ++LVFLWGF+ GI+AG LK+
Sbjct: 443  LAPELEDFTNVFHPFSTPIQDSFNGGDVGMWTNNTKKVSCEHLVFLWGFKIGITAGMLKS 502

Query: 538  LLCKSHDALSKDHVFDVRLVDKNCAVVVFWKTGLSEWFLSAIDSGD---DLRELVAEGLM 708
            LL  SHD  S++  FDV+LVDK+CA+VVFW++G+S+ FL  ++S +   DL+ELV++G+ 
Sbjct: 503  LLRSSHDIFSRE--FDVKLVDKSCAIVVFWQSGVSKRFLDILNSEEIRGDLKELVSDGMR 560

Query: 709  AAGYEAYKRVCKSEILGADLADSLAEFDRVS----EAHTE-ESAEIYWNNELMINFDDL 870
               YE Y  +C+  +   DLA+SL      S    E++ E +S+EI+W N+ +IN DDL
Sbjct: 561  VTSYETYNTICRLGLWEMDLAESLERALESSCCDIESNCERKSSEIHWYNDNVINLDDL 619


>ref|XP_002527264.1| ribonuclease, putative [Ricinus communis] gi|223533357|gb|EEF35108.1|
            ribonuclease, putative [Ricinus communis]
          Length = 624

 Score =  282 bits (722), Expect = 9e-74
 Identities = 149/300 (49%), Positives = 202/300 (67%), Gaps = 10/300 (3%)
 Frame = +1

Query: 1    VVAHKSLNDFTFIHSKFLAPLPPTMDEFRSSLLSAFPNILDVNHLMKEIGPLNEYSNLPA 180
            VV+H SLND  FIHSKFLAPLPP+M+EF  SL   FP ++DVNHLMKEI PL + +N+P 
Sbjct: 328  VVSHNSLNDLAFIHSKFLAPLPPSMEEFTCSLRLVFPQVIDVNHLMKEISPLKKVTNIPM 387

Query: 181  AISYLKRNFFAPIEIEIPQKASMEESKNHGHNVVRISELFAKLCFILKITPETEHHNPDG 360
            A SYLK  FFAP+++EIP  A + E K HGHNV+RI +LFAKLC+ILK+ P +   N   
Sbjct: 388  ATSYLKNWFFAPVDMEIPFPAMVNEGKIHGHNVMRICQLFAKLCYILKLAPNSIQSNEKN 447

Query: 361  -PSTLKRYSNVFNLGSNSFQDSNEGDDISVWTHNPRKISIDNLVFLWGFRSGISAGNLKN 537
              S ++ Y N+F+      Q+  + +D+ +WT+N RK+S  +LVFLWGFR  +SAG LK+
Sbjct: 448  LASAIEAYVNIFSPYFPGPQEPTD-EDVRIWTNNTRKVSCQDLVFLWGFRYRMSAGMLKS 506

Query: 538  LLCKSHDALSKDHVFDVRLVDKNCAVVVFWKTGLSEWFLSAIDSGDD----LRELVAEGL 705
            LL +SH   S++  FDVR VDK+CA+VVFW+ GLS   L  +    +    LRE+V+EG+
Sbjct: 507  LLQQSHKVFSEE--FDVRFVDKSCAIVVFWEPGLSNTLLDVLKGSSEIVGPLREMVSEGV 564

Query: 706  MAAGYEAYKRVCKSEILGADLADS----LAEFDRVSEAHT-EESAEIYWNNELMINFDDL 870
             AA Y+ Y RVC+  +   +LADS    LA+ D  S++ +   S+  YW +E MIN D+L
Sbjct: 565  RAASYDTYNRVCRLGLWHENLADSLDKALADTDHPSDSDSVTSSSNTYWCHEWMINLDEL 624


>ref|XP_002321239.1| predicted protein [Populus trichocarpa] gi|222862012|gb|EEE99554.1|
            predicted protein [Populus trichocarpa]
          Length = 628

 Score =  276 bits (705), Expect = 8e-72
 Identities = 150/299 (50%), Positives = 204/299 (68%), Gaps = 9/299 (3%)
 Frame = +1

Query: 1    VVAHKSLNDFTFIHSKFLAPLPPTMDEFRSSLLSAFPNILDVNHLMKEIGPLNEYSNLPA 180
            VV+H SLND T IHSKF+APLPPT+DEF  SL  AFP ++DVNHLMKEI PL + +++P 
Sbjct: 334  VVSHGSLNDLTVIHSKFIAPLPPTVDEFMCSLRLAFPLVIDVNHLMKEISPLRKVTSIPV 393

Query: 181  AISYLKRNFFAPIEIEIPQKASMEESKNHGHNVVRISELFAKLCFILKITPETEHHNPD- 357
            AIS LK  FF PI++EIP +A   E   HG NVV+I ELFA+LC ILKI P     + + 
Sbjct: 394  AISQLKNRFFTPIDMEIPCQAMENEDTIHGQNVVKICELFARLCSILKIDPAAVKSDEEK 453

Query: 358  GPSTLKRYSNVFNLGSNSFQDSNEGDDISVWTHNPRKISIDNLVFLWGFRSGISAGNLKN 537
            G S L+ Y+N+F+    + ++  +G +I +WT+N R +S +++VFLWGF   ++AG LK+
Sbjct: 454  GASALEAYANIFSPFCTASEEPIDG-EIKIWTNNTRTVSCEDMVFLWGFGDRVTAGILKS 512

Query: 538  LLCKSHDALSKDHVFDVRLVDKNCAVVVFWKTGLSEWFLSAIDSGDD----LRELVAEGL 705
            LL +SH+A SK+  FDVRLVD +CA+V+FW+ GL+E FL+ ++   D    LRE+V+EGL
Sbjct: 513  LLQESHEAFSKE--FDVRLVDNSCAIVIFWQHGLTETFLNTMNKCSDMRGPLREMVSEGL 570

Query: 706  MAAGYEAYKRVCKSEILGADLADS----LAEFDRVSEAHTEESAEIYWNNELMINFDDL 870
             AAGYE Y R C+  +  + LADS    LA+ D  SEA ++        NE +IN DDL
Sbjct: 571  RAAGYETYNRACRLGLWESSLADSLDRALADSDCASEADSKTKCSDRC-NEWIINLDDL 628