BLASTX nr result

ID: Atractylodes22_contig00024921 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00024921
         (1658 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274263.1| PREDICTED: zinc finger CCCH domain-containin...   302   2e-79
ref|XP_002515733.1| conserved hypothetical protein [Ricinus comm...   215   3e-53
ref|XP_003540851.1| PREDICTED: zinc finger CCCH domain-containin...   202   3e-49
ref|XP_002883320.1| hypothetical protein ARALYDRAFT_898633 [Arab...   174   6e-41
ref|NP_566691.1| zinc finger CCCH domain-containing protein 40 [...   169   3e-39

>ref|XP_002274263.1| PREDICTED: zinc finger CCCH domain-containing protein 13 [Vitis
            vinifera] gi|297739310|emb|CBI28961.3| unnamed protein
            product [Vitis vinifera]
          Length = 444

 Score =  302 bits (774), Expect = 2e-79
 Identities = 192/407 (47%), Positives = 243/407 (59%), Gaps = 5/407 (1%)
 Frame = -1

Query: 1658 FNGRREYRGADLRDKLGRQHSPPRRNSLDRDARDRLPSHGHISPR-LGKKSDWGHRKREH 1482
            FNGRR+YR  DLRDKL R+HSPPRR S  R AR R   HG+   R +GKKSD  HR+++ 
Sbjct: 41   FNGRRDYRDDDLRDKLDRRHSPPRRYSPGRGARSRPVIHGYSPSRSVGKKSDRKHRRKQQ 100

Query: 1481 FDGESDFSGNLRLSDGAERQARERKPSSSEFKDVHDEQLKQVQSEIDMLEDHKQQLQIYL 1302
             DG+SDFSG+LR+SDG + + +E K + S  K+V  EQLKQVQ +ID L+DHK QL+ Y+
Sbjct: 101  LDGQSDFSGSLRISDGTDDRLKEGKLAPSGSKNVLGEQLKQVQLDIDRLDDHKSQLKTYM 160

Query: 1301 EERVQEADSLNSKIEELEMQLSMEKEDCKRISSKIRKFVKANNRHLRIQDELKRSQARLQ 1122
            EERVQEADSL S+I+ELE QL  E+EDCKRI+SKI+KFVKA++R+LRIQD+LKRS+ARLQ
Sbjct: 161  EERVQEADSLTSRIQELESQLYKEREDCKRITSKIKKFVKAHSRYLRIQDDLKRSEARLQ 220

Query: 1121 KLGDQLGSDARAAANEEDISINILSDEEALGNLLVTPKNDKASPRKDEMLGNHLMGLQKD 942
            KLG QL SD    ANEED SI+ILSD E  GN +V+PKN +                   
Sbjct: 221  KLGSQLISDTSKHANEEDSSIDILSDGEPTGNHVVSPKNGQ------------------- 261

Query: 941  QYKASLSKKRMRVHMVDADEKSKQASSATGECLGMGNMKSERHSRWDAHLAQTKNTDKAR 762
            Q KAS SKKR   ++ DA E SK    A GE    G  +SE+ SRW    AQ  +  +A 
Sbjct: 262  QIKASPSKKRAHSNL-DA-EGSKPGKVAKGEGFLAGTTRSEKLSRWKMQHAQLMHKKEAE 319

Query: 761  SEADGISNARPSTNNGKPIRRKSNFTSAPSEDKFTDPESARMAVNMXXXXXXXXDL---- 594
               +G S ++P T  GK  R K+   S P  DK    ES  +  +         ++    
Sbjct: 320  VLDNGNSGSKPLTIEGKHKRGKNVSASIPLADKLKGLESGLVLPSTSMAAHAVDEVETVE 379

Query: 593  NEKLEAEEVASARVEGGSTLDNTXXXXXXXXXXXXXXXLNAYLQYKG 453
             EK+E  E AS  V+  +  +                  NAY QYKG
Sbjct: 380  TEKIETVETASREVDKVAAYE--IPGLPFPPPPPPPHPRNAYSQYKG 424


>ref|XP_002515733.1| conserved hypothetical protein [Ricinus communis]
            gi|223545170|gb|EEF46680.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 448

 Score =  215 bits (547), Expect = 3e-53
 Identities = 144/384 (37%), Positives = 210/384 (54%), Gaps = 11/384 (2%)
 Frame = -1

Query: 1658 FNGRREYRGADLRDKLGRQHSPPRRNSLDRDARDRLPSHGHISPR-LGKKSDWGHRKREH 1482
            +N +++ R  DLRDKL  + SP R+ S  +D R +    G    R L + SD   R++ H
Sbjct: 41   YNDKQDRRSGDLRDKLDMKFSPRRKYSPAKDTRGQRRFRGSSPSRSLERNSDRKRRRKPH 100

Query: 1481 FDGESDFSGNLRLSDGAERQARERKPSSSEFKDVHDEQLKQVQSEIDMLEDHKQQLQIYL 1302
            FDG+SDFSG+L+ SDGA  Q + RK ++++ + V  EQLK+V++EI MLE  K QL+I +
Sbjct: 101  FDGQSDFSGSLKSSDGAGDQVKRRK-NTADSRVVLKEQLKEVRTEISMLEQQKSQLRILV 159

Query: 1301 EERVQEADSLNSKIEELEMQLSMEKEDCKRISSKIRKFVKANNRHLRIQDELKRSQARLQ 1122
            +E+++EAD L+S+I EL+ QLS EKE+CKR  SKI+KFVKA+  +++IQ+ELKRSQ RLQ
Sbjct: 160  QEKIEEADILSSRIRELDSQLSKEKEECKRTISKIKKFVKAHKHYVQIQEELKRSQGRLQ 219

Query: 1121 KLGDQLGSD-ARAAANEEDISINILSDEEALGNLLVTPKND---KASPRKDEMLGNHLMG 954
            KLGDQLGS       NEED SINI+SD EA G+  ++P+N+    +SPR++ +       
Sbjct: 220  KLGDQLGSGIITTGGNEEDSSINIVSDGEAPGSHAISPRNEVQNNSSPRENILHAK---- 275

Query: 953  LQKDQYKASLSKKRMRVHMVDADEKSKQASSATGECLGMGNMKSERHSRWDAHLAQTKNT 774
                                D  E+SK+A+S          +   +  + +A+ A     
Sbjct: 276  -------------------CDNAEESKKANSTNDGGYHTKTISLGKSFQLNANAALLNIN 316

Query: 773  DKARSEADGISNARPSTNNGKPIRRKSNFTSAPSEDKFTDPE------SARMAVNMXXXX 612
             +     +G    R   N GK  R KS +    S DK    E      S  MA       
Sbjct: 317  KEVVMADNGNDRDRSIGNEGKQKRGKSVYACISSADKLKGSEIGRLAPSTSMAAFHAIDE 376

Query: 611  XXXXDLNEKLEAEEVASARVEGGS 540
                ++ E +E  E AS ++  G+
Sbjct: 377  LVDVEVEESIEVVETASLQIHKGA 400


>ref|XP_003540851.1| PREDICTED: zinc finger CCCH domain-containing protein 13-like
            [Glycine max]
          Length = 417

 Score =  202 bits (513), Expect = 3e-49
 Identities = 126/289 (43%), Positives = 176/289 (60%), Gaps = 3/289 (1%)
 Frame = -1

Query: 1658 FNGRREYRGADLRDKLGRQHSPPRRNSLDRDARDRLPSHGHISPRLG--KKSDWGHRKRE 1485
            ++GRR+Y G DLRDKL R++  PRR S   D R R     + SP +   KKSD  HR+++
Sbjct: 41   YSGRRDYLGNDLRDKLDRRYVSPRRYSPAPDTRGRQIIREY-SPTMSLEKKSDRRHRRKQ 99

Query: 1484 HFDGESDFSGNLRLSDGAERQARERKPSSSEFKDVHDEQLKQVQSEIDMLEDHKQQLQIY 1305
              +G+SD SGNL++SD  + Q +E K  SS  ++  +EQLK+V S+I  L++ K QL++Y
Sbjct: 100  DTNGQSDISGNLKVSDRVQGQVKEGKLLSSGSRNNLEEQLKKVDSDISTLQNRKFQLEVY 159

Query: 1304 LEERVQEADSLNSKIEELEMQLSMEKEDCKRISSKIRKFVKANNRHLRIQDELKRSQARL 1125
            L+E VQE DSLNS+I ELE QL  E E+CKRI+S+IRKFV+ +N    +QDEL+RSQ RL
Sbjct: 160  LDESVQEVDSLNSRIRELEAQLCKEDEECKRITSRIRKFVRVHNHMSELQDELRRSQVRL 219

Query: 1124 QKLGDQLGSD-ARAAANEEDISINILSDEEALGNLLVTPKNDKASPRKDEMLGNHLMGLQ 948
            Q+ GDQL SD +R  ANEED+SI+I+S+ E  G   +   N                   
Sbjct: 220  QRFGDQLVSDISRIGANEEDLSIDIISNGENTGLHPIAKHN------------------- 260

Query: 947  KDQYKASLSKKRMRVHMVDADEKSKQASSATGECLGMGNMKSERHSRWD 801
             +   AS  KKR+ +   DA E+ KQ  S  G    +   ++ + SRW+
Sbjct: 261  VEHNDASSHKKRLHIEH-DALEELKQDRSKDGHL--VETARTRKRSRWN 306


>ref|XP_002883320.1| hypothetical protein ARALYDRAFT_898633 [Arabidopsis lyrata subsp.
            lyrata] gi|297329160|gb|EFH59579.1| hypothetical protein
            ARALYDRAFT_898633 [Arabidopsis lyrata subsp. lyrata]
          Length = 436

 Score =  174 bits (441), Expect = 6e-41
 Identities = 109/300 (36%), Positives = 162/300 (54%), Gaps = 5/300 (1%)
 Frame = -1

Query: 1652 GRREYRGADLRDKLGRQHSPPRRNSLDRDARDRLPSHGHISPR-LGKKSDWGHRKREHFD 1476
            GRR    +DLRD+LGRQ SP RR SLDR  R      GH +PR    + D  +R+   FD
Sbjct: 56   GRRHNMDSDLRDRLGRQFSPERRPSLDRSGRRVQRFSGHDNPRPFENRRDNEYRENRRFD 115

Query: 1475 GESDFSGNLRLSDGAERQARERKPSSSEFKDVHDEQLKQVQSEIDMLEDHKQQLQIYLEE 1296
               +++G L+  +  E +A + +     + +V +EQLK V+ ++ ML D KQ+L+  +E 
Sbjct: 116  ERRNYAGGLKAGNRIEDRAEDGRNKFQGYNNVLEEQLKDVEMDVKMLTDDKQRLEASVER 175

Query: 1295 RVQEADSLNSKIEELEMQLSMEKEDCKRISSKIRKFVKANNRHLRIQDELKRSQARLQKL 1116
            +  E D L+S+I ELE QL  EKE+C+RI+S  +KFVK  NR LR QD+LKRS+ARLQKL
Sbjct: 176  KAHEVDILSSRIHELETQLDREKEECRRITSNTKKFVKEYNRFLRAQDDLKRSEARLQKL 235

Query: 1115 GDQLGSD-ARAAANEEDISINILSDEEALGNLLVTPKNDKASPRKDEMLGNHLMGLQKDQ 939
            G+QL +  A +  N  D  ++I+SDEE  G  L       A   ++E+     +  +K  
Sbjct: 236  GNQLSTYLAGSEGNNRDAGVDIVSDEENNGRNL-----RAACDPQNELQNTSSLSRKKHY 290

Query: 938  YKASLSKKRMRVHMVDADEKSKQASSATGECLGMGNMKS---ERHSRWDAHLAQTKNTDK 768
                 +K+ +   ++   E+ K        C  M + KS   E    W+      K++ K
Sbjct: 291  VDQYTTKEPVEDGLIGRGEEEKVEKEKKRPCWNMVSSKSYSEEESGAWNDEDTINKSSSK 350


>ref|NP_566691.1| zinc finger CCCH domain-containing protein 40 [Arabidopsis thaliana]
            gi|75249392|sp|Q93XW7.1|C3H40_ARATH RecName: Full=Zinc
            finger CCCH domain-containing protein 40; Short=AtC3H40
            gi|16649059|gb|AAL24381.1| Unknown protein [Arabidopsis
            thaliana] gi|22136226|gb|AAM91191.1| unknown protein
            [Arabidopsis thaliana] gi|332643033|gb|AEE76554.1| zinc
            finger CCCH domain-containing protein 40 [Arabidopsis
            thaliana]
          Length = 437

 Score =  169 bits (427), Expect = 3e-39
 Identities = 121/342 (35%), Positives = 184/342 (53%), Gaps = 5/342 (1%)
 Frame = -1

Query: 1649 RREYRGADLRDKLGRQHSPPRRNSLDRDAR--DRLPSHGHISPRLGKKSDWGHRKREHFD 1476
            RR    +DLRD+LGRQ SP RR SLDR  R   R   H +  P    + D  +R+   FD
Sbjct: 57   RRHNMDSDLRDRLGRQFSPERRPSLDRSGRRVQRFSGHDNSMP-FENRRDKDYRENRRFD 115

Query: 1475 GESDFSGNLRLSDGAERQARERKPSSSEFKDVHDEQLKQVQSEIDMLEDHKQQLQIYLEE 1296
               D++G L++ +  E +A + +     + +V +EQLK V+ ++ ML D K +L+  +E 
Sbjct: 116  ERRDYAGGLKVGNRIEDRAEDGRNKFHGYNNVLEEQLKDVEMDVKMLTDDKLRLEASVER 175

Query: 1295 RVQEADSLNSKIEELEMQLSMEKEDCKRISSKIRKFVKANNRHLRIQDELKRSQARLQKL 1116
            +  E D L S+I+ELE QL  EK++C+RI+S  +KFVK  NR LR QD+LKRS+ARLQKL
Sbjct: 176  KAHEVDILTSRIQELETQLDREKDECRRITSSSKKFVKEYNRFLRAQDDLKRSEARLQKL 235

Query: 1115 GDQLGSD-ARAAANEEDISINILSDEEALGNLLVTPKNDKASPRKDEMLGNHLMGLQKDQ 939
            G+QL +  A +  N  D+ ++I+SDEE  G  L T     A    +E+           Q
Sbjct: 236  GNQLSTYLAGSEGNNRDVGLDIVSDEETNGRNLRT-----ACDPHNEL-----------Q 279

Query: 938  YKASLSKKRMRVHMVDADEKSKQASSATGECLGMGNMKSERHSRWDAHLAQTKNTDK--A 765
              +SLS+K+  V      E  +      GE   + N K +R   W+   +++ + ++  A
Sbjct: 280  NTSSLSRKKHYVDQYTTKEPVEDGLIGRGEEEKVENEK-KRPPCWNMLSSKSYSEEESGA 338

Query: 764  RSEADGISNARPSTNNGKPIRRKSNFTSAPSEDKFTDPESAR 639
             ++ D I+ +    +N K  RR S  TSA  +   +   +AR
Sbjct: 339  WNDEDTINRSSSKEDNWKR-RRFSIGTSATDKVILSTSMAAR 379


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