BLASTX nr result

ID: Atractylodes22_contig00024880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00024880
         (522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002877592.1| hypoxia-responsive family protein [Arabidops...    94   1e-17
dbj|BAF01465.1| hypothetical protein [Arabidopsis thaliana]            94   1e-17
gb|ABK95217.1| unknown [Populus trichocarpa]                           93   3e-17
gb|AAP40393.1| unknown protein [Arabidopsis thaliana] gi|3079408...    91   8e-17
ref|XP_003633805.1| PREDICTED: RING-H2 finger protein ATL48-like...    91   8e-17

>ref|XP_002877592.1| hypoxia-responsive family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297323430|gb|EFH53851.1| hypoxia-responsive
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 366

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 48/76 (63%), Positives = 56/76 (73%)
 Frame = -2

Query: 371 MEAINRELEGIFPEKKRVRNPLVPIXXXXXXXXXXXXLISFKQGNSQLGQTLMRARVVTQ 192
           M A+  ++E +F EKKRVRNPLVP+            LISF++GNSQLGQ LMRARVV Q
Sbjct: 1   MSAVEPDMEDLFQEKKRVRNPLVPLGALMTAGVLTAGLISFRRGNSQLGQVLMRARVVVQ 60

Query: 191 GATVALMVGTAIYYGE 144
           GATVALMVGTA YYG+
Sbjct: 61  GATVALMVGTAYYYGD 76


>dbj|BAF01465.1| hypothetical protein [Arabidopsis thaliana]
          Length = 95

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 47/79 (59%), Positives = 57/79 (72%)
 Frame = -2

Query: 380 MENMEAINRELEGIFPEKKRVRNPLVPIXXXXXXXXXXXXLISFKQGNSQLGQTLMRARV 201
           +E M ++  ++E +F EKKRVRNPLVP+            LISF++GNSQLGQ LMRARV
Sbjct: 12  LEKMSSVEPDMEDLFQEKKRVRNPLVPLGALMTAGVLTAGLISFRRGNSQLGQVLMRARV 71

Query: 200 VTQGATVALMVGTAIYYGE 144
           V QGATVALMVGT  YYG+
Sbjct: 72  VVQGATVALMVGTGYYYGD 90


>gb|ABK95217.1| unknown [Populus trichocarpa]
          Length = 86

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 49/79 (62%), Positives = 54/79 (68%)
 Frame = -2

Query: 380 MENMEAINRELEGIFPEKKRVRNPLVPIXXXXXXXXXXXXLISFKQGNSQLGQTLMRARV 201
           ME M       E +F EKKRVRNPLVP+            LISF++GNSQLGQ LMRARV
Sbjct: 1   MEKMGTAEPNFEQLFEEKKRVRNPLVPVGALMTAGVLTAGLISFRRGNSQLGQVLMRARV 60

Query: 200 VTQGATVALMVGTAIYYGE 144
           V QGATVALMVGTA YYG+
Sbjct: 61  VVQGATVALMVGTAFYYGD 79


>gb|AAP40393.1| unknown protein [Arabidopsis thaliana] gi|30794087|gb|AAP40486.1|
           unknown protein [Arabidopsis thaliana]
          Length = 81

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 46/76 (60%), Positives = 55/76 (72%)
 Frame = -2

Query: 371 MEAINRELEGIFPEKKRVRNPLVPIXXXXXXXXXXXXLISFKQGNSQLGQTLMRARVVTQ 192
           M ++  ++E +F EKKRVRNPLVP+            LISF++GNSQLGQ LMRARVV Q
Sbjct: 1   MSSVEPDMEDLFQEKKRVRNPLVPLGALMTAGVLTAGLISFRRGNSQLGQVLMRARVVVQ 60

Query: 191 GATVALMVGTAIYYGE 144
           GATVALMVGT  YYG+
Sbjct: 61  GATVALMVGTGYYYGD 76


>ref|XP_003633805.1| PREDICTED: RING-H2 finger protein ATL48-like [Vitis vinifera]
          Length = 80

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 48/80 (60%), Positives = 56/80 (70%)
 Frame = -2

Query: 380 MENMEAINRELEGIFPEKKRVRNPLVPIXXXXXXXXXXXXLISFKQGNSQLGQTLMRARV 201
           ME M   + E++ +F +KKRV+NPLVPI            LISFK+GNS LGQ LMRARV
Sbjct: 1   MEKMGTADSEMDQLFEQKKRVKNPLVPIGALLTAGVLTAGLISFKKGNSHLGQKLMRARV 60

Query: 200 VTQGATVALMVGTAIYYGEK 141
           V QGATVALM+ TA YYGEK
Sbjct: 61  VVQGATVALMLSTAYYYGEK 80


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