BLASTX nr result

ID: Atractylodes22_contig00024773 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00024773
         (769 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519721.1| PREDICTED: chaperone activity of bc1 complex...    73   6e-11
ref|XP_003535303.1| PREDICTED: chaperone activity of bc1 complex...    71   2e-10
ref|XP_002515159.1| Ubiquinone biosynthesis protein coq-8, putat...    62   1e-07
emb|CAA04557.1| ABC1 protein [Arabidopsis thaliana]                    58   3e-06
ref|XP_002273486.1| PREDICTED: chaperone activity of bc1 complex...    57   4e-06

>ref|XP_003519721.1| PREDICTED: chaperone activity of bc1 complex-like,
           mitochondrial-like [Glycine max]
          Length = 618

 Score = 73.2 bits (178), Expect = 6e-11
 Identities = 61/214 (28%), Positives = 97/214 (45%), Gaps = 2/214 (0%)
 Frame = -2

Query: 636 MASLKDFSKLVNGLSLVAKEVMRRG-HLDNPDLQSLIRQALLSATDISGLTKGEVRNFTI 460
           MAS +D ++L+NGLSL+A E  +R       D ++LI++ L+SATD+SG+T+G+VR+F  
Sbjct: 1   MASFRDLTRLLNGLSLIANEFAKRSLPATTSDFETLIKKTLVSATDLSGITRGKVRHFPD 60

Query: 459 TAPKANADTNGF-KEDSSVVYFGEQEEEAPSYTSAADNVLSPTPSDQSIPREADFDPQRP 283
           T P +N   +      SSVV+F +    + S+++ A   +  T  D      +D + ++ 
Sbjct: 61  TPPSSNTTQHDHAAASSSVVFFADDNPSSQSHSTPATTTV--TNIDDVAYSSSDANHRQA 118

Query: 282 SPSTIKYKNGNVHADARINHSLNAGKIGNGESETLKTETIIPPATLEGIDXXXXXAVEEG 103
           S +     N     + +     +A  +  G S  L      PP+ L              
Sbjct: 119 SDA-----NVCAAEEEKSEVVTSAETVNQGASRELAPAPEPPPSPLR------------- 160

Query: 102 KAVXXXXXXXPLVXXXXXXXXXKVPSTPFSRALG 1
                                 KVP+TPFSRALG
Sbjct: 161 ---------------KRRPRERKVPATPFSRALG 179


>ref|XP_003535303.1| PREDICTED: chaperone activity of bc1 complex-like,
           mitochondrial-like [Glycine max]
          Length = 611

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 41/105 (39%), Positives = 63/105 (60%), Gaps = 8/105 (7%)
 Frame = -2

Query: 636 MASLKDFSKLVNGLSLVAKEVMRRG--HLDNPDLQSLIRQALLSATDISGLTKGEVRNFT 463
           MAS +D ++L NG SL+A +  +R   +    D Q+LI++AL+SATD+SG+TKG+VR+F 
Sbjct: 1   MASFRDLTRLFNGFSLIANQFAKRSLPNSTTSDFQTLIKKALVSATDLSGITKGKVRHFP 60

Query: 462 ITAPKANAD-TNGFKEDSSVVYFGE-----QEEEAPSYTSAADNV 346
            T P + A   +     SSVV+F +     Q    P+ T+   N+
Sbjct: 61  DTPPSSTATRRHDAAASSSVVFFSDDIPSSQSHSTPTTTTTVTNI 105


>ref|XP_002515159.1| Ubiquinone biosynthesis protein coq-8, putative [Ricinus communis]
           gi|223545639|gb|EEF47143.1| Ubiquinone biosynthesis
           protein coq-8, putative [Ricinus communis]
          Length = 620

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 45/108 (41%), Positives = 60/108 (55%), Gaps = 10/108 (9%)
 Frame = -2

Query: 636 MASLKDFSKLVNGLSLVAKEVMRRGH-LD---NPDLQSLI----RQALLSATDISGLTKG 481
           M S KD  ++VNGLSLVAKEV +R   LD     D Q+L     ++A++S TD+SGLTKG
Sbjct: 1   MTSFKDIGRIVNGLSLVAKEVAKRSKSLDAAATGDFQTLFTSTAKKAIVSVTDLSGLTKG 60

Query: 480 EVRNFTITAPKANADTNGFKEDSSVVYFGEQEE--EAPSYTSAADNVL 343
            VR FT   PK            SVV+F   ++  E     S++ NV+
Sbjct: 61  NVREFTPPKPK-----------ESVVFFDHSDDVPEPSPVQSSSINVV 97


>emb|CAA04557.1| ABC1 protein [Arabidopsis thaliana]
          Length = 623

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 51/153 (33%), Positives = 81/153 (52%), Gaps = 12/153 (7%)
 Frame = -2

Query: 624 KDFSKLVNGLSLVAKEVMRRG----HLDNPDLQSLI----RQALLSATDISGLTKGEVRN 469
           K F++LVNG+SLVAKE+  +        N DL+ LI    ++AL++ATD+ GLT G++R 
Sbjct: 6   KSFTRLVNGVSLVAKEIYNQSPELQRARNGDLEGLITSSGKKALVAATDLVGLTSGKLRE 65

Query: 468 FTITAPKANADTNGFKEDSSVVYFGEQEEEAPSYTSAADNVLSPTPSDQSI---PREADF 298
            +I   K          + SVVYF E + +        DNV++ TP  +S+   P E   
Sbjct: 66  LSIRRSK----------EPSVVYFDEGDNK--------DNVVA-TPEIRSVNTEPSEKIV 106

Query: 297 DPQ-RPSPSTIKYKNGNVHADARINHSLNAGKI 202
           D +   S  + + KN N   + +++  + AG+I
Sbjct: 107 DSKVLRSEFSDEVKNSNREGEIKVS-GVEAGEI 138


>ref|XP_002273486.1| PREDICTED: chaperone activity of bc1 complex-like, mitochondrial
           [Vitis vinifera] gi|297744068|emb|CBI37038.3| unnamed
           protein product [Vitis vinifera]
          Length = 583

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 34/69 (49%), Positives = 50/69 (72%), Gaps = 8/69 (11%)
 Frame = -2

Query: 618 FSKLVNGLSLVAKEVMRRGH-LDNP---DLQSLI----RQALLSATDISGLTKGEVRNFT 463
           +++LVNGLSL+AKE ++R   LDN    DL++LI    ++A+++ATD SGLTKG+VR F+
Sbjct: 4   WTRLVNGLSLIAKEAVKRSEVLDNARAGDLETLISSAVKKAVVTATDASGLTKGKVREFS 63

Query: 462 ITAPKANAD 436
           I A    +D
Sbjct: 64  IPATSYASD 72


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