BLASTX nr result

ID: Atractylodes22_contig00024717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00024717
         (562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_565053.1| SNF7-like protein [Arabidopsis thaliana] gi|297...    84   1e-14
gb|AAM61431.1| developmental protein, putative [Arabidopsis thal...    84   1e-14
ref|XP_002890245.1| SNF7 family protein [Arabidopsis lyrata subs...    83   3e-14
ref|XP_003543608.1| PREDICTED: charged multivesicular body prote...    83   3e-14
ref|XP_004146833.1| PREDICTED: charged multivesicular body prote...    82   6e-14

>ref|NP_565053.1| SNF7-like protein [Arabidopsis thaliana]
           gi|297839171|ref|XP_002887467.1| SNF7 family protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|5903092|gb|AAD55650.1|AC008017_23 Highly similar to
           developmental protein DG1118 [Arabidopsis thaliana]
           gi|16648963|gb|AAL24333.1| Highly similar to
           developmental protein DG1118 [Arabidopsis thaliana]
           gi|20148689|gb|AAM10235.1| similar to developmental
           protein DG1118 [Arabidopsis thaliana]
           gi|297333308|gb|EFH63726.1| SNF7 family protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|332197285|gb|AEE35406.1| SNF7-like protein
           [Arabidopsis thaliana]
          Length = 203

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 40/48 (83%), Positives = 43/48 (89%)
 Frame = +2

Query: 2   MQQVADDHGLEVAVGLPQPGAHAVPTTTAEKVDEDDLSRRLEELKARG 145
           MQQVADD+GLEV+VGLPQP  HA+PT T EKVDEDDLSRRL ELKARG
Sbjct: 156 MQQVADDYGLEVSVGLPQPAGHAIPTKTEEKVDEDDLSRRLAELKARG 203


>gb|AAM61431.1| developmental protein, putative [Arabidopsis thaliana]
          Length = 203

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 40/48 (83%), Positives = 43/48 (89%)
 Frame = +2

Query: 2   MQQVADDHGLEVAVGLPQPGAHAVPTTTAEKVDEDDLSRRLEELKARG 145
           MQQVADD+GLEV+VGLPQP  HA+PT T EKVDEDDLSRRL ELKARG
Sbjct: 156 MQQVADDYGLEVSVGLPQPAGHAIPTKTEEKVDEDDLSRRLAELKARG 203


>ref|XP_002890245.1| SNF7 family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297336087|gb|EFH66504.1| SNF7 family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 203

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 39/48 (81%), Positives = 43/48 (89%)
 Frame = +2

Query: 2   MQQVADDHGLEVAVGLPQPGAHAVPTTTAEKVDEDDLSRRLEELKARG 145
           MQQVADD+GLEV+VGLPQP  HA+PT T EKV+EDDLSRRL ELKARG
Sbjct: 156 MQQVADDYGLEVSVGLPQPAGHAIPTNTEEKVEEDDLSRRLAELKARG 203


>ref|XP_003543608.1| PREDICTED: charged multivesicular body protein 1-like isoform 1
           [Glycine max] gi|356550468|ref|XP_003543609.1|
           PREDICTED: charged multivesicular body protein 1-like
           isoform 2 [Glycine max] gi|356550470|ref|XP_003543610.1|
           PREDICTED: charged multivesicular body protein 1-like
           isoform 3 [Glycine max] gi|356556672|ref|XP_003546647.1|
           PREDICTED: charged multivesicular body protein 1-like
           [Glycine max]
          Length = 203

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 40/48 (83%), Positives = 43/48 (89%)
 Frame = +2

Query: 2   MQQVADDHGLEVAVGLPQPGAHAVPTTTAEKVDEDDLSRRLEELKARG 145
           MQQVADD+GLEV+VGLPQP AHAVP   A+KVDEDDLSRRL ELKARG
Sbjct: 156 MQQVADDYGLEVSVGLPQPAAHAVPAKEADKVDEDDLSRRLAELKARG 203


>ref|XP_004146833.1| PREDICTED: charged multivesicular body protein 1-like [Cucumis
           sativus] gi|449476685|ref|XP_004154806.1| PREDICTED:
           charged multivesicular body protein 1-like [Cucumis
           sativus]
          Length = 203

 Score = 82.0 bits (201), Expect = 6e-14
 Identities = 39/48 (81%), Positives = 42/48 (87%)
 Frame = +2

Query: 2   MQQVADDHGLEVAVGLPQPGAHAVPTTTAEKVDEDDLSRRLEELKARG 145
           MQQVADD+GLEV+VGLPQP AHAVP    EK+DEDDLSRRL ELKARG
Sbjct: 156 MQQVADDYGLEVSVGLPQPAAHAVPARETEKIDEDDLSRRLAELKARG 203


Top