BLASTX nr result

ID: Atractylodes22_contig00024700 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00024700
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]   155   3e-36
gb|ABW74566.1| integrase [Boechera divaricarpa]                       155   4e-36
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]   152   3e-35
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...   149   2e-34
gb|ABA99612.1| retrotransposon protein, putative, unclassified [...   144   1e-32

>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score =  155 bits (392), Expect = 3e-36
 Identities = 73/104 (70%), Positives = 90/104 (86%), Gaps = 1/104 (0%)
 Frame = -2

Query: 309  LKKALYGLKQAPRAWYSKIDSYFLENGFERSKNEPTLYVKKRG-TDFLVLSLYVDDMIYM 133
            LKKALYGLKQAPRAWYSKIDSYF+ENGFERSK+EP LY+K++G  D L++ LYVDDMIYM
Sbjct: 890  LKKALYGLKQAPRAWYSKIDSYFVENGFERSKSEPNLYLKRQGKNDLLIICLYVDDMIYM 949

Query: 132  GSCKSIVAEFKSPVMEKFKMSDLGLLHYFLRLEVNQCVDGIFIS 1
            GS  S++ EFK+ + +KF+MS+LGLLH+FL LEV Q  DG+F+S
Sbjct: 950  GSSSSLINEFKACMKKKFEMSBLGLLHFFLXLEVKQVEDGVFVS 993


>gb|ABW74566.1| integrase [Boechera divaricarpa]
          Length = 1165

 Score =  155 bits (391), Expect = 4e-36
 Identities = 75/104 (72%), Positives = 90/104 (86%), Gaps = 1/104 (0%)
 Frame = -2

Query: 309  LKKALYGLKQAPRAWYSKIDSYFLENGFERSKNEPTLYVKKRGT-DFLVLSLYVDDMIYM 133
            L KALYGLKQAPRAWY+KIDSYF E GFERSK+EPTLY+KK+G  D LV+ LYVDDMIYM
Sbjct: 792  LYKALYGLKQAPRAWYNKIDSYFAETGFERSKSEPTLYIKKQGAGDILVVCLYVDDMIYM 851

Query: 132  GSCKSIVAEFKSPVMEKFKMSDLGLLHYFLRLEVNQCVDGIFIS 1
            GS  S+V+EFK+ +MEKF+M+DLGLL++FL LEV Q  DG+F+S
Sbjct: 852  GSSASLVSEFKASMMEKFEMTDLGLLYFFLGLEVKQVEDGVFVS 895


>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
          Length = 1430

 Score =  152 bits (384), Expect = 3e-35
 Identities = 72/104 (69%), Positives = 89/104 (85%), Gaps = 1/104 (0%)
 Frame = -2

Query: 309  LKKALYGLKQAPRAWYSKIDSYFLENGFERSKNEPTLYVKKRG-TDFLVLSLYVDDMIYM 133
            LK ALYGLKQAPRAWYSKIDSYF+ENGFE+SK+EP LY+K++G  D L++ LYVDDMIYM
Sbjct: 1061 LKXALYGLKQAPRAWYSKIDSYFVENGFEKSKSEPNLYLKRQGKNDLLIICLYVDDMIYM 1120

Query: 132  GSCKSIVAEFKSPVMEKFKMSDLGLLHYFLRLEVNQCVDGIFIS 1
            GS  S++ EFK+ + +KF+MSDLGLLH+FL LEV Q  DG+F+S
Sbjct: 1121 GSSSSLINEFKACMKKKFEMSDLGLLHFFLGLEVKQVEDGVFVS 1164


>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score =  149 bits (376), Expect = 2e-34
 Identities = 76/104 (73%), Positives = 88/104 (84%), Gaps = 1/104 (0%)
 Frame = -2

Query: 309  LKKALYGLKQAPRAWYSKIDSYFLENGFERSKNEPTLYVKKRGTD-FLVLSLYVDDMIYM 133
            L+KALYGLKQAPRAWYSKIDS+F  +GF RS NEPTLY+KK+GTD FL++ LYVDDMIY+
Sbjct: 961  LRKALYGLKQAPRAWYSKIDSFFQGSGFRRSDNEPTLYLKKQGTDEFLLVCLYVDDMIYI 1020

Query: 132  GSCKSIVAEFKSPVMEKFKMSDLGLLHYFLRLEVNQCVDGIFIS 1
            GS KS+V +FKS +M  F+MSDLGLL YFL LEV Q  DGIFIS
Sbjct: 1021 GSSKSLVNDFKSNMMRNFEMSDLGLLKYFLGLEVIQDKDGIFIS 1064


>gb|ABA99612.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1198

 Score =  144 bits (362), Expect = 1e-32
 Identities = 66/103 (64%), Positives = 85/103 (82%)
 Frame = -2

Query: 309  LKKALYGLKQAPRAWYSKIDSYFLENGFERSKNEPTLYVKKRGTDFLVLSLYVDDMIYMG 130
            LKKALYGLKQAPRAWYS+ID YF++ GF +S +EPTLYV K GTD L++SLYVDD+IY G
Sbjct: 851  LKKALYGLKQAPRAWYSQIDKYFIQKGFAKSISEPTLYVNKTGTDILIVSLYVDDLIYTG 910

Query: 129  SCKSIVAEFKSPVMEKFKMSDLGLLHYFLRLEVNQCVDGIFIS 1
            + + ++ +FK  +M  ++MSDLGLLHYFL +EV+Q  +GIFIS
Sbjct: 911  NSEKMMQDFKKDMMHTYEMSDLGLLHYFLGMEVHQSDEGIFIS 953


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