BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00024677
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    33   1e-06

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 32.7 bits (73), Expect(3) = 1e-06
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = +2

Query: 446 LKWYQWENKRRP 481
           L+WYQWENKRRP
Sbjct: 221 LRWYQWENKRRP 232



 Score = 32.3 bits (72), Expect(3) = 1e-06
 Identities = 11/19 (57%), Positives = 16/19 (84%)
 Frame = +1

Query: 310 RRLEMPVFDGREPNGWILR 366
           ++L+MP FD  +P+GWILR
Sbjct: 175 KKLDMPAFDDTDPDGWILR 193



 Score = 31.2 bits (69), Expect(3) = 1e-06
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = +3

Query: 360 LEAERYCTLNRLTNDERLEVAVIAFEGDA 446
           L  ER+     LT+ E++E AV+A EGDA
Sbjct: 192 LRGERFFAFYGLTDAEKMEAAVVAMEGDA 220