BLASTX nr result

ID: Atractylodes22_contig00024676 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00024676
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    87   1e-15
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    83   3e-14
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                    82   5e-14
emb|CAN72562.1| hypothetical protein VITISV_032210 [Vitis vinifera]    81   1e-13
dbj|BAG72152.1| hypothetical protein [Lotus japonicus]                 80   2e-13

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 48/89 (53%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
 Frame = -2

Query: 266  QIHPVFHVSQLKPIRGAVPETVHIPAEIDKDLELQSIPEALLGVRQNTAGGNDL-QVLIK 90
            +IHPVFHVS LK + G  P    IP  ID D+EL   PE LL VRQ   G     + LIK
Sbjct: 1505 KIHPVFHVSLLKKVVGNTPVLPTIPPHIDVDMELVVEPEELLDVRQIRQGKQTFTECLIK 1564

Query: 89   WHNLTTQEATWEDFEGIRQRFPAFHLEDK 3
            W  L   EATWED   I  RFP+FHLEDK
Sbjct: 1565 WKGLPAFEATWEDMSPIHLRFPSFHLEDK 1593


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 42/89 (47%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
 Frame = -2

Query: 266  QIHPVFHVSQLKPIRGAVPETVHIPAEIDKDLELQSIPEALLGVRQNTAGGNDL-QVLIK 90
            ++HPVFH+SQLK   G++  +  IP ++  DL L + PE+LL +R +     ++ +VLIK
Sbjct: 1438 KLHPVFHISQLKKAVGSLQSSPTIPPQLTNDLVLDAQPESLLNIRSHPQKPAEVTEVLIK 1497

Query: 89   WHNLTTQEATWEDFEGIRQRFPAFHLEDK 3
            W NL   EATWED      RFP FHLEDK
Sbjct: 1498 WLNLPAFEATWEDAALFNARFPDFHLEDK 1526


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 38/89 (42%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
 Frame = -2

Query: 266  QIHPVFHVSQLKPIRGAVPETVHIPAEIDKDLELQSIPEALLGVRQNTAG-GNDLQVLIK 90
            +IHPVFH+SQL+   G  P    +P  +  DL L S P  +LG+R N        ++L++
Sbjct: 1274 KIHPVFHISQLRKAVGTAPVFPVLPPLLTTDLVLPSSPSQVLGIRPNPLNQAAPAEILVQ 1333

Query: 89   WHNLTTQEATWEDFEGIRQRFPAFHLEDK 3
            W +++  EATWE+ + I +RFP FHLEDK
Sbjct: 1334 WSDMSADEATWENVQDIHERFPTFHLEDK 1362


>emb|CAN72562.1| hypothetical protein VITISV_032210 [Vitis vinifera]
          Length = 1003

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 38/88 (43%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
 Frame = -2

Query: 263 IHPVFHVSQLKPIRGAVPETVHIPAEIDKDLELQSIPEALLGVRQNTAGGNDL-QVLIKW 87
           IHP+FH+SQL+   G  P +  +P+++  ++EL   P  +LGVRQ   G   + +VL++W
Sbjct: 711 IHPMFHISQLRKAVGTAPTSSSLPSQLTAEMELLVEPRTILGVRQCLTGSTFVTEVLVQW 770

Query: 86  HNLTTQEATWEDFEGIRQRFPAFHLEDK 3
            +L   EATWE F  I+ +FP FHL DK
Sbjct: 771 KDLLDFEATWESFATIQNQFPEFHLVDK 798


>dbj|BAG72152.1| hypothetical protein [Lotus japonicus]
          Length = 1369

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 39/88 (44%), Positives = 57/88 (64%)
 Frame = -2

Query: 266  QIHPVFHVSQLKPIRGAVPETVHIPAEIDKDLELQSIPEALLGVRQNTAGGNDLQVLIKW 87
            Q+HPVFH+S LK    A  ++  +PA + ++ EL+  PEA++  R+N  G  DL+VLI+W
Sbjct: 1247 QVHPVFHISLLKKAENAGVQSQPLPAALTEEWELKVEPEAIMDTRENRDG--DLEVLIRW 1304

Query: 86   HNLTTQEATWEDFEGIRQRFPAFHLEDK 3
             +L T E +WEDF  +  +FP   LEDK
Sbjct: 1305 KDLPTFEDSWEDFSKLLDQFPNHQLEDK 1332


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