BLASTX nr result
ID: Atractylodes22_contig00024671
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00024671
(1253 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group... 400 e-109
gb|ABB47941.2| retrotransposon protein, putative, unclassified [... 374 e-101
gb|AAG13591.2|AC051633_7 putative gag/pol polyprotein [Oryza sat... 374 e-101
gb|AAM08751.1|AC025098_18 Putative copia-type polyprotein [Oryza... 370 e-100
gb|AAT93988.1| putative polyprotein [Oryza sativa Japonica Group] 359 9e-97
>gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53981353|gb|AAV24907.1| hypothetical protein [Oryza
sativa Japonica Group]
Length = 1679
Score = 400 bits (1028), Expect = e-109
Identities = 197/365 (53%), Positives = 252/365 (69%), Gaps = 4/365 (1%)
Frame = -2
Query: 1249 NILYSPHIIKNLLSVRRFTCDNSVSVEFDPFGFSVKDLQTGRLLSRHNSSGNLYPVTPPT 1070
+IL SP IIKNL+SVRRF DN SVEFDPFGFSVKDL+T +++R NSSG LY +
Sbjct: 620 DILCSPAIIKNLISVRRFVIDNWCSVEFDPFGFSVKDLRTRTVIARFNSSGPLYSLHHAL 679
Query: 1069 LPPQACFL----ASTSLPWHDRLGHPGAQVLDVLSRRFNFPCNHNKNSNLCHSCHLSNSK 902
PP A +ST L WH RLGH G L+ L+ P + +CH+C L
Sbjct: 680 PPPPAATALLANSSTDLLWHRRLGHLGHDALNRLAAVV--PMTRGDLTGVCHACQLGRHV 737
Query: 901 RLPFYESNSFTFTPFDIIHYDLWTSPILSKTGYKYYMVLIDNFSNFVWVYPLKYKSETFP 722
RLPF S S T F++ H DLWTSP++S +G+KYY+V++D+ S++VW +PL++KS+TF
Sbjct: 738 RLPFASSTSRASTNFELFHCDLWTSPVVSASGFKYYLVILDDCSHYVWTFPLRFKSDTFT 797
Query: 721 TFAKFHQMIATQFHRNIKTFQCDLGGEFDNHAFKSFAQQHGLLFRFSCPQTSSQNGRSER 542
T + F + TQF NI++ QCD G EFDN A ++F +G+ R SCP TS QNG++ER
Sbjct: 798 TLSHFFAYVKTQFATNIRSIQCDNGREFDNSAARTFFLTNGVHLRMSCPHTSPQNGKAER 857
Query: 541 MIRRLNDIIRSLLIHAHLPPTFWVEALHTATYLHNILPSKRLNYFTPTFALYLRHPTYDH 362
++R LN+I+RS+L A LP +FWVEALHTAT+L N P+K L+ TP FALY HP+Y H
Sbjct: 858 ILRSLNNIVRSMLFQAKLPGSFWVEALHTATHLINRHPTKTLDRHTPHFALYGTHPSYSH 917
Query: 361 LRVFGCACYPNTSATQPHKLHPRAIRCIFLGYPPDFRGYRCFDPTTGKVSISRHVTFDET 182
LRVFGC CYPN SAT PHKL PR+ C+FLGYP +GYRCFDP + +V ISRHV FDE
Sbjct: 918 LRVFGCKCYPNLSATTPHKLAPRSTMCVFLGYPLYHKGYRCFDPLSNRVIISRHVVFDEH 977
Query: 181 VFPFS 167
FPF+
Sbjct: 978 SFPFT 982
Score = 92.4 bits (228), Expect = 2e-16
Identities = 42/54 (77%), Positives = 48/54 (88%)
Frame = -1
Query: 164 DPTLYRSLAGALQYLTFTRPDISYAVQQVCLFMHEPHEPHFAFLKRIIRYLQGT 3
DPT +RSLAGALQYLTFTRPDISYAVQQVCL MH+P EPH A LKRI+ Y++G+
Sbjct: 1459 DPTDFRSLAGALQYLTFTRPDISYAVQQVCLHMHDPREPHLAALKRILHYIRGS 1512
>gb|ABB47941.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1414
Score = 374 bits (961), Expect = e-101
Identities = 181/368 (49%), Positives = 247/368 (67%), Gaps = 4/368 (1%)
Frame = -2
Query: 1249 NILYSPHIIKNLLSVRRFTCDNSVSVEFDPFGFSVKDLQTGRLLSRHNSSGNLYPVTPPT 1070
N+L SP +IKNL+SV++ T DN+VS+EFDP GFS+KDLQT + R +S G+LYP+ P+
Sbjct: 426 NVLVSPPLIKNLISVKKLTRDNNVSIEFDPTGFSIKDLQTQVVKLRCDSPGDLYPLRLPS 485
Query: 1069 LPPQACFLASTSLP----WHDRLGHPGAQVLDVLSRRFNFPCNHNKNSNLCHSCHLSNSK 902
P A L++TS P WH RLGHPG+ L + F+F CN + + C +CH+ +
Sbjct: 486 --PHA--LSATSSPSVEHWHLRLGHPGSASLSKVLGSFDFQCNKSAPHH-CSACHVGTNV 540
Query: 901 RLPFYESNSFTFTPFDIIHYDLWTSPILSKTGYKYYMVLIDNFSNFVWVYPLKYKSETFP 722
RLPF+ S+S T PF ++H D+WTSPI S +GYKYY+V +D+F++++W +P++ KSE F
Sbjct: 541 RLPFHSSSSQTLFPFQLVHTDVWTSPIYSNSGYKYYVVFLDDFTHYIWTFPVRNKSEVFH 600
Query: 721 TFAKFHQMIATQFHRNIKTFQCDLGGEFDNHAFKSFAQQHGLLFRFSCPQTSSQNGRSER 542
T F TQF + Q D G E+D++A +S HG + R SCP +S QNG++ER
Sbjct: 601 TVRSFFAYAHTQFGLPVLALQTDNGKEYDSYALRSLLSLHGAVLRLSCPYSSQQNGKAER 660
Query: 541 MIRRLNDIIRSLLIHAHLPPTFWVEALHTATYLHNILPSKRLNYFTPTFALYLRHPTYDH 362
++R +ND +R++L+H+ P +FW EAL TAT+L N P + TP L PTYDH
Sbjct: 661 ILRTINDYVRTMLVHSAAPLSFWAEALQTATHLINRRPCRATGSLTPYQLLLGAPPTYDH 720
Query: 361 LRVFGCACYPNTSATQPHKLHPRAIRCIFLGYPPDFRGYRCFDPTTGKVSISRHVTFDET 182
LRVFGC CYPNT AT PHKL PR++ C+F+GYP D RGYRC+D + +V SRHVTF E
Sbjct: 721 LRVFGCLCYPNTIATAPHKLSPRSLACVFIGYPADHRGYRCYDMVSRRVFTSRHVTFVED 780
Query: 181 VFPFSMIP 158
VFPF P
Sbjct: 781 VFPFRDAP 788
>gb|AAG13591.2|AC051633_7 putative gag/pol polyprotein [Oryza sativa Japonica Group]
Length = 1417
Score = 374 bits (961), Expect = e-101
Identities = 181/368 (49%), Positives = 247/368 (67%), Gaps = 4/368 (1%)
Frame = -2
Query: 1249 NILYSPHIIKNLLSVRRFTCDNSVSVEFDPFGFSVKDLQTGRLLSRHNSSGNLYPVTPPT 1070
N+L SP +IKNL+SV++ T DN+VS+EFDP GFS+KDLQT + R +S G+LYP+ P+
Sbjct: 426 NVLVSPPLIKNLISVKKLTRDNNVSIEFDPTGFSIKDLQTQVVKLRCDSPGDLYPLRLPS 485
Query: 1069 LPPQACFLASTSLP----WHDRLGHPGAQVLDVLSRRFNFPCNHNKNSNLCHSCHLSNSK 902
P A L++TS P WH RLGHPG+ L + F+F CN + + C +CH+ +
Sbjct: 486 --PHA--LSATSSPSVEHWHLRLGHPGSASLSKVLGSFDFQCNKSAPHH-CSACHVGTNV 540
Query: 901 RLPFYESNSFTFTPFDIIHYDLWTSPILSKTGYKYYMVLIDNFSNFVWVYPLKYKSETFP 722
RLPF+ S+S T PF ++H D+WTSPI S +GYKYY+V +D+F++++W +P++ KSE F
Sbjct: 541 RLPFHSSSSQTLFPFQLVHTDVWTSPIYSNSGYKYYVVFLDDFTHYIWTFPVRNKSEVFH 600
Query: 721 TFAKFHQMIATQFHRNIKTFQCDLGGEFDNHAFKSFAQQHGLLFRFSCPQTSSQNGRSER 542
T F TQF + Q D G E+D++A +S HG + R SCP +S QNG++ER
Sbjct: 601 TVRSFFAYAHTQFGLPVLALQTDNGKEYDSYALRSLLSLHGAVLRLSCPYSSQQNGKAER 660
Query: 541 MIRRLNDIIRSLLIHAHLPPTFWVEALHTATYLHNILPSKRLNYFTPTFALYLRHPTYDH 362
++R +ND +R++L+H+ P +FW EAL TAT+L N P + TP L PTYDH
Sbjct: 661 ILRTINDYVRTMLVHSAAPLSFWAEALQTATHLINRRPCRATGSLTPYQLLLGAPPTYDH 720
Query: 361 LRVFGCACYPNTSATQPHKLHPRAIRCIFLGYPPDFRGYRCFDPTTGKVSISRHVTFDET 182
LRVFGC CYPNT AT PHKL PR++ C+F+GYP D RGYRC+D + +V SRHVTF E
Sbjct: 721 LRVFGCLCYPNTIATAPHKLSPRSLACVFIGYPADHRGYRCYDMVSRRVFTSRHVTFVED 780
Query: 181 VFPFSMIP 158
VFPF P
Sbjct: 781 VFPFRDAP 788
Score = 87.8 bits (216), Expect = 5e-15
Identities = 48/85 (56%), Positives = 57/85 (67%)
Frame = -1
Query: 257 FPGIPVLRSYHREGFHLSSCHF*RDCFSLFHDPTLYRSLAGALQYLTFTRPDISYAVQQV 78
F GI V R+ +GF LS + D D + YRS+AGALQYLT TRPDI+YAVQQV
Sbjct: 1124 FLGIEVQRT--ADGFVLSQSKYATD------DSSWYRSIAGALQYLTLTRPDIAYAVQQV 1175
Query: 77 CLFMHEPHEPHFAFLKRIIRYLQGT 3
CL MH P E H LKRI+RY++GT
Sbjct: 1176 CLHMHAPREAHVTLLKRILRYIKGT 1200
>gb|AAM08751.1|AC025098_18 Putative copia-type polyprotein [Oryza sativa Japonica Group]
Length = 1803
Score = 370 bits (949), Expect = e-100
Identities = 179/368 (48%), Positives = 245/368 (66%), Gaps = 4/368 (1%)
Frame = -2
Query: 1249 NILYSPHIIKNLLSVRRFTCDNSVSVEFDPFGFSVKDLQTGRLLSRHNSSGNLYPVTPPT 1070
N+L SP +IKNL+SV++ T DN+VS+EFDP GFS+KDLQT + R +S G+LYP+ P+
Sbjct: 426 NVLVSPPLIKNLISVKKLTRDNNVSIEFDPTGFSIKDLQTQVVKLRCDSPGDLYPLRLPS 485
Query: 1069 LPPQACFLASTSLP----WHDRLGHPGAQVLDVLSRRFNFPCNHNKNSNLCHSCHLSNSK 902
P A L++TS P WH RLGHPG+ L + F+F CN + + C +CH+ +
Sbjct: 486 --PHA--LSATSSPSVEHWHLRLGHPGSASLSKVLGSFDFQCNKSAPHH-CSACHVGTNV 540
Query: 901 RLPFYESNSFTFTPFDIIHYDLWTSPILSKTGYKYYMVLIDNFSNFVWVYPLKYKSETFP 722
RLPF+ S+S T PF ++H D+WTSPI S +GYKYY+V +D+F++++W +P++ KSE F
Sbjct: 541 RLPFHSSSSQTLFPFQLVHTDVWTSPIYSNSGYKYYVVFLDDFTHYIWTFPVRNKSEVFH 600
Query: 721 TFAKFHQMIATQFHRNIKTFQCDLGGEFDNHAFKSFAQQHGLLFRFSCPQTSSQNGRSER 542
T F TQF + Q D G E+D++A +S HG + R SCP +S QNG++ER
Sbjct: 601 TVRSFFAYAHTQFGLPVLALQTDNGKEYDSYALRSLLSLHGAVLRLSCPYSSQQNGKAER 660
Query: 541 MIRRLNDIIRSLLIHAHLPPTFWVEALHTATYLHNILPSKRLNYFTPTFALYLRHPTYDH 362
++R +ND +R++L+H+ P +FW EAL TA +L N P + P L PTYDH
Sbjct: 661 ILRTINDCVRTMLVHSAAPLSFWAEALQTAMHLINRRPCRATGSLKPYQLLLGAPPTYDH 720
Query: 361 LRVFGCACYPNTSATQPHKLHPRAIRCIFLGYPPDFRGYRCFDPTTGKVSISRHVTFDET 182
LRVFGC CYPNT AT PHKL PR++ C+F+GYP D RGYRC+D + +V SRHVTF E
Sbjct: 721 LRVFGCLCYPNTIATAPHKLSPRSLACVFIGYPADHRGYRCYDMVSRRVFTSRHVTFVED 780
Query: 181 VFPFSMIP 158
VFPF P
Sbjct: 781 VFPFRDAP 788
Score = 87.8 bits (216), Expect = 5e-15
Identities = 40/57 (70%), Positives = 46/57 (80%)
Frame = -1
Query: 173 LFHDPTLYRSLAGALQYLTFTRPDISYAVQQVCLFMHEPHEPHFAFLKRIIRYLQGT 3
LF D + YRS+AGALQYLT TRPDI+YAVQQVCL MH P E H LKRI+RY++GT
Sbjct: 1176 LFQDSSWYRSIAGALQYLTLTRPDIAYAVQQVCLHMHAPREAHVTLLKRILRYIKGT 1232
>gb|AAT93988.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1480
Score = 359 bits (921), Expect = 9e-97
Identities = 176/366 (48%), Positives = 240/366 (65%), Gaps = 2/366 (0%)
Frame = -2
Query: 1249 NILYSPHIIKNLLSVRRFTCDNSVSVEFDPFGFSVKDLQTGRLLSRHNSSGNLY--PVTP 1076
NIL +P +++NLL VR+FT DN S EFD FGFSVKDL T R++ R NS G+LY P T
Sbjct: 415 NILVAPSLVRNLLFVRQFTRDNKCSFEFDEFGFSVKDLPTRRVILRCNSRGDLYTLPTTV 474
Query: 1075 PTLPPQACFLASTSLPWHDRLGHPGAQVLDVLSRRFNFPCNHNKNSNLCHSCHLSNSKRL 896
P + + FLA +S WH RLGHP + L + C + N+ LCH+CHL RL
Sbjct: 475 PAITAHS-FLAKSSTLWHHRLGHPSPAAVQTLHKLAILSCTRS-NNKLCHACHLGKHTRL 532
Query: 895 PFYESNSFTFTPFDIIHYDLWTSPILSKTGYKYYMVLIDNFSNFVWVYPLKYKSETFPTF 716
F +S+S T +PF+++H D+WTSP+LS +G+KYY+V++D+F++F W +PL++KS+
Sbjct: 533 SFSKSSSSTSSPFELVHCDVWTSPVLSLSGFKYYLVVLDDFTHFCWTFPLRHKSDVHQHL 592
Query: 715 AKFHQMIATQFHRNIKTFQCDLGGEFDNHAFKSFAQQHGLLFRFSCPQTSSQNGRSERMI 536
+F + TQF I+ FQ D G +F NHA SF G++ R SCP TS QNG++ER++
Sbjct: 593 LEFVAYVKTQFSLPIRCFQADNGTKFVNHATTSFFASRGIVLRLSCPYTSPQNGKAERVL 652
Query: 535 RRLNDIIRSLLIHAHLPPTFWVEALHTATYLHNILPSKRLNYFTPTFALYLRHPTYDHLR 356
R +N IR+LLI A +PP++W EAL TATYL N PS + P L+ + P Y +L+
Sbjct: 653 RTINKSIRTLLIQASMPPSYWAEALATATYLLNRRPSTSVRNSIPYQLLHNKLPDYSNLQ 712
Query: 355 VFGCACYPNTSATQPHKLHPRAIRCIFLGYPPDFRGYRCFDPTTGKVSISRHVTFDETVF 176
VFGC CYPN SA HKL PR+ +FLGY +G+RC D +T ++ ISRHV FDE F
Sbjct: 713 VFGCLCYPNLSAMTSHKLSPRSAPYVFLGYSASHKGFRCLDISTRRLYISRHVVFDEKTF 772
Query: 175 PFSMIP 158
PF+ IP
Sbjct: 773 PFAAIP 778
Score = 93.2 bits (230), Expect = 1e-16
Identities = 40/54 (74%), Positives = 48/54 (88%)
Frame = -1
Query: 164 DPTLYRSLAGALQYLTFTRPDISYAVQQVCLFMHEPHEPHFAFLKRIIRYLQGT 3
DPT YRSL GALQYLT TRP+++YAVQQVCLFMH+P EPH A +KRI+RY++GT
Sbjct: 1250 DPTEYRSLVGALQYLTLTRPELAYAVQQVCLFMHDPREPHLALIKRILRYIKGT 1303