BLASTX nr result

ID: Atractylodes22_contig00024657 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00024657
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547181.1| PREDICTED: uncharacterized protein LOC100793...    75   7e-12
ref|XP_003542971.1| PREDICTED: uncharacterized protein LOC100809...    74   2e-11
ref|XP_002522264.1| replication factor C / DNA polymerase III ga...    74   2e-11
ref|XP_002265273.1| PREDICTED: uncharacterized protein LOC100249...    69   3e-10
ref|XP_003593819.1| DNA polymerase III subunit gamma/tau [Medica...    69   5e-10

>ref|XP_003547181.1| PREDICTED: uncharacterized protein LOC100793832 [Glycine max]
          Length = 1191

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 50/100 (50%), Positives = 57/100 (57%), Gaps = 16/100 (16%)
 Frame = +2

Query: 2   KNHMHKNSPIMTDRSLIRDLVVLQRSRSLRDXXXXXXXXXXXXALDLLPRRVEKEAAVGG 181
           KNHMHKNSPI+ DRS++RDLVVLQRSRSLRD             +DLL +RVE +A   G
Sbjct: 34  KNHMHKNSPILADRSIMRDLVVLQRSRSLRDPSASPPSWHSPSVVDLLFKRVENDAVSQG 93

Query: 182 GNGRWSIG---------LSGNS-------SSNVGAGDAVR 253
             GR SIG         LSG S       SS V  G+ VR
Sbjct: 94  --GRRSIGVERRKEGRRLSGTSPPLVSIGSSRVAPGEIVR 131


>ref|XP_003542971.1| PREDICTED: uncharacterized protein LOC100809005 [Glycine max]
          Length = 1101

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 45/91 (49%), Positives = 53/91 (58%), Gaps = 9/91 (9%)
 Frame = +2

Query: 2   KNHMHKNSPIMTDRSLIRDLVVLQRSRSLRDXXXXXXXXXXXXALDLLPRRVEKEAAVGG 181
           KNHMHKNSPI+ DRS++RDLVVLQRSRSLRD             +DLL +RVE +A   G
Sbjct: 34  KNHMHKNSPILADRSIMRDLVVLQRSRSLRDPSASPPSWHSPSVVDLLFKRVENDAVSQG 93

Query: 182 GNGRWSIG---------LSGNSSSNVGAGDA 247
             GR S+G         LSG S   V  G +
Sbjct: 94  --GRMSVGAERRKEGRRLSGTSPPLVSIGSS 122


>ref|XP_002522264.1| replication factor C / DNA polymerase III gamma-tau subunit,
           putative [Ricinus communis] gi|223538517|gb|EEF40122.1|
           replication factor C / DNA polymerase III gamma-tau
           subunit, putative [Ricinus communis]
          Length = 1105

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 39/69 (56%), Positives = 48/69 (69%)
 Frame = +2

Query: 2   KNHMHKNSPIMTDRSLIRDLVVLQRSRSLRDXXXXXXXXXXXXALDLLPRRVEKEAAVGG 181
           KNHMHK SPI+ DRSL+RDL+VLQRSRSLRD             +DLLP++ +K+AAV  
Sbjct: 34  KNHMHKQSPILADRSLMRDLIVLQRSRSLRDPSASPPSWHSPSVVDLLPKKGDKDAAV-- 91

Query: 182 GNGRWSIGL 208
             GR SIG+
Sbjct: 92  TEGRRSIGI 100


>ref|XP_002265273.1| PREDICTED: uncharacterized protein LOC100249702 [Vitis vinifera]
          Length = 1161

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 44/103 (42%), Positives = 57/103 (55%), Gaps = 16/103 (15%)
 Frame = +2

Query: 2   KNHMHKNSPIMTDRSLIRDLVVLQRSRSLRDXXXXXXXXXXXXALDLLPRRVEKEAAVGG 181
           KNHMHK+SPI+ DRS++RDL+VLQRSRSLRD             +DLL ++VE +A    
Sbjct: 34  KNHMHKHSPILADRSIMRDLIVLQRSRSLRDPSTSPPSWHSPSVIDLLSKKVENDAV--S 91

Query: 182 GNGRWSIG---------LSGNS-------SSNVGAGDAVRKRN 262
             GR S+G         LSG+S       +S V  G+ V   N
Sbjct: 92  REGRRSVGIERRREGRRLSGSSPTVASLATSKVAPGEVVGGNN 134


>ref|XP_003593819.1| DNA polymerase III subunit gamma/tau [Medicago truncatula]
           gi|355482867|gb|AES64070.1| DNA polymerase III subunit
           gamma/tau [Medicago truncatula]
          Length = 1177

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 37/68 (54%), Positives = 45/68 (66%)
 Frame = +2

Query: 2   KNHMHKNSPIMTDRSLIRDLVVLQRSRSLRDXXXXXXXXXXXXALDLLPRRVEKEAAVGG 181
           KNHMHKNSPI+ DRS++RDLVVLQRSRSLRD             +DLL +R + + A  G
Sbjct: 34  KNHMHKNSPIIADRSIMRDLVVLQRSRSLRDPSASPPSWHSPSVVDLLFKRADNDGASQG 93

Query: 182 GNGRWSIG 205
             GR S+G
Sbjct: 94  --GRRSVG 99


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