BLASTX nr result

ID: Atractylodes22_contig00024634 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00024634
         (510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268896.2| PREDICTED: E3 ubiquitin-protein ligase UPL1-...   202   3e-50
ref|XP_002522774.1| E3 ubiquitin protein ligase upl2, putative [...   197   1e-48
ref|XP_002298873.1| predicted protein [Populus trichocarpa] gi|2...   185   3e-45
ref|XP_003531107.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-...   176   2e-42
ref|XP_004166446.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...   176   2e-42

>ref|XP_002268896.2| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Vitis vinifera]
          Length = 4116

 Score =  202 bits (513), Expect = 3e-50
 Identities = 112/171 (65%), Positives = 130/171 (76%), Gaps = 3/171 (1%)
 Frame = +3

Query: 6    ENKSQDGPIKS-KGQKKISANLTQVIHHMLEIILTYPSLNPEEGYTRSTNAMEVDEPATS 182
            ENK  DGP K  KG KKI ANLTQVI  +LEI+L YP+    E  T  + AMEVDEP T 
Sbjct: 2110 ENKIHDGPGKCPKGHKKIPANLTQVIDLLLEIVLKYPAPKSPEDGTGYSTAMEVDEPTTK 2169

Query: 183  -KGKSKVNETRE-ESDILPESLAGTAKVTFVLKLLSDILLMYAHAVGIVLKRDLETCQLQ 356
             KGKSKV+ET++ ESD L E  AG AKVTFVLKLLSDILLMY H+VG++L+RDLE  QL+
Sbjct: 2170 VKGKSKVDETKKIESDNLSERSAGLAKVTFVLKLLSDILLMYVHSVGVILRRDLEMSQLR 2229

Query: 357  GFNQLDCTGHGGIVHHIMHRILHPPVDKNSGSDESRAKLSEKASWFLVVLC 509
            G +QLD  G+GGI+HHI+HR+L   VDK +G DE R KLSEKASWFLVVLC
Sbjct: 2230 GSSQLDIPGNGGILHHILHRLLPLSVDKTAGPDEWRDKLSEKASWFLVVLC 2280


>ref|XP_002522774.1| E3 ubiquitin protein ligase upl2, putative [Ricinus communis]
            gi|223538012|gb|EEF39625.1| E3 ubiquitin protein ligase
            upl2, putative [Ricinus communis]
          Length = 3691

 Score =  197 bits (500), Expect = 1e-48
 Identities = 108/171 (63%), Positives = 128/171 (74%), Gaps = 3/171 (1%)
 Frame = +3

Query: 6    ENKSQDGPIK-SKGQKKISANLTQVIHHMLEIILTYPSLNPEEGYTRSTNAMEVDEPATS 182
            ENK  DG  K +KG KKI ANLTQVI  +L+I+L +P    EEG    + +MEVDEPAT 
Sbjct: 1669 ENKVHDGSGKCAKGHKKIPANLTQVIDQLLDIVLKFPVPKSEEGCISDSTSMEVDEPATK 1728

Query: 183  -KGKSKVNETRE-ESDILPESLAGTAKVTFVLKLLSDILLMYAHAVGIVLKRDLETCQLQ 356
             KGKSK++ETR+ ES+   E  AG AKVTFVLKLLSDILLMY HAVG++LKRD E CQL+
Sbjct: 1729 VKGKSKIDETRKMESE--SERSAGLAKVTFVLKLLSDILLMYVHAVGVILKRDSELCQLR 1786

Query: 357  GFNQLDCTGHGGIVHHIMHRILHPPVDKNSGSDESRAKLSEKASWFLVVLC 509
            G NQ D  GH GI+HH++HR+L    DK++G DE R KLSEKASWFLVVLC
Sbjct: 1787 GSNQTDSPGHCGILHHVLHRLLPISTDKSAGPDEWRDKLSEKASWFLVVLC 1837


>ref|XP_002298873.1| predicted protein [Populus trichocarpa] gi|222846131|gb|EEE83678.1|
            predicted protein [Populus trichocarpa]
          Length = 3728

 Score =  185 bits (470), Expect = 3e-45
 Identities = 100/170 (58%), Positives = 125/170 (73%), Gaps = 2/170 (1%)
 Frame = +3

Query: 6    ENKSQDGPIK-SKGQKKISANLTQVIHHMLEIILTYPSLNPEEGYTRSTNAMEVDEPATS 182
            E+K  DG  K +KG KKI ANLTQVI  +L+I+L +P    +EG     N+M+VDEPAT 
Sbjct: 1735 ESKMHDGSGKCAKGHKKIPANLTQVIDQLLDIVLKHPLPKSQEGCVGDLNSMDVDEPATK 1794

Query: 183  -KGKSKVNETREESDILPESLAGTAKVTFVLKLLSDILLMYAHAVGIVLKRDLETCQLQG 359
             KGKSKV+E ++ ++   E  AG AKV FVLKLLSDILLMY HAVG++L+RDLE C L+G
Sbjct: 1795 LKGKSKVDEAKK-TESESEISAGLAKVNFVLKLLSDILLMYVHAVGVILRRDLELCHLRG 1853

Query: 360  FNQLDCTGHGGIVHHIMHRILHPPVDKNSGSDESRAKLSEKASWFLVVLC 509
             NQ   +G GGI+HHI+H++L    DK++G DE R KLSEKASWFLVVLC
Sbjct: 1854 SNQTGSSGLGGIIHHILHQLLPIATDKSAGPDEWRDKLSEKASWFLVVLC 1903


>ref|XP_003531107.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Glycine max]
          Length = 3713

 Score =  176 bits (446), Expect = 2e-42
 Identities = 99/174 (56%), Positives = 122/174 (70%), Gaps = 5/174 (2%)
 Frame = +3

Query: 3    PENKSQDGPIKS-KGQKKISANLTQVIHHMLEIILTYPSLNPEEGYTRSTNAMEVDEPAT 179
            PE+K  DGP K  K  KK+  NLTQVI  +LEI+L YP +  +E     + +M++DEP  
Sbjct: 1730 PESKPHDGPGKCLKSHKKVPVNLTQVIDQLLEIVLKYPLVKGQEDSECDSTSMDIDEPTM 1789

Query: 180  S-KGKSKVNETREESDIL-PES--LAGTAKVTFVLKLLSDILLMYAHAVGIVLKRDLETC 347
              KGKSKV    EE+ IL PES    G  KVTFVLKLLSDILLMY HAVG++L+RD E C
Sbjct: 1790 KVKGKSKV----EEAGILEPESERSTGLVKVTFVLKLLSDILLMYGHAVGVILRRDSEMC 1845

Query: 348  QLQGFNQLDCTGHGGIVHHIMHRILHPPVDKNSGSDESRAKLSEKASWFLVVLC 509
            Q +G NQ   +GH GI+HH++HR+L   VDK++G D+ R KLSEKASWFLVVLC
Sbjct: 1846 QFRGSNQP--SGHSGIIHHVLHRLLPLSVDKSAGPDDWRGKLSEKASWFLVVLC 1897


>ref|XP_004166446.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UPL1-like
            [Cucumis sativus]
          Length = 3692

 Score =  176 bits (445), Expect = 2e-42
 Identities = 99/170 (58%), Positives = 119/170 (70%), Gaps = 2/170 (1%)
 Frame = +3

Query: 6    ENKSQDGPIK-SKGQKKISANLTQVIHHMLEIILTYPSLNPEEGYTRSTNAMEVDEPATS 182
            ENK  DG  K SK  KKI ANLTQVI  ++EI+L YP    +     +  +MEVDEP T 
Sbjct: 1675 ENKIFDGSAKCSKNHKKIPANLTQVIDQLIEIVLKYPLTQNQVDSVSNVCSMEVDEPNTK 1734

Query: 183  -KGKSKVNETREESDILPESLAGTAKVTFVLKLLSDILLMYAHAVGIVLKRDLETCQLQG 359
             KGKSKV + +   D   +S  G AKVTFVLKLLSDILLMY HAVG++L+RD E CQL+G
Sbjct: 1735 VKGKSKVVDKKNSEDESEKS-TGLAKVTFVLKLLSDILLMYVHAVGVILRRDSEMCQLRG 1793

Query: 360  FNQLDCTGHGGIVHHIMHRILHPPVDKNSGSDESRAKLSEKASWFLVVLC 509
             N LD  G GGIV+HI+ R+L   +DK++G DE R KLSEKAS+FLVVLC
Sbjct: 1794 CNHLDGAGQGGIVYHILQRLLPLSIDKSAGPDEWRDKLSEKASYFLVVLC 1843


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