BLASTX nr result

ID: Atractylodes22_contig00024629 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00024629
         (732 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632859.1| PREDICTED: pentatricopeptide repeat-containi...   256   3e-66
ref|XP_004141838.1| PREDICTED: pentatricopeptide repeat-containi...   211   9e-53
ref|XP_003530137.1| PREDICTED: uncharacterized protein LOC100799...   177   2e-42
ref|XP_003626978.1| hypothetical protein MTR_8g013670 [Medicago ...   177   2e-42
gb|AFK40744.1| unknown [Medicago truncatula]                          171   2e-40

>ref|XP_003632859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62350-like [Vitis vinifera]
           gi|297743240|emb|CBI36107.3| unnamed protein product
           [Vitis vinifera]
          Length = 230

 Score =  256 bits (654), Expect = 3e-66
 Identities = 134/204 (65%), Positives = 164/204 (80%), Gaps = 1/204 (0%)
 Frame = +3

Query: 117 PVRCGPRDNRGPLHKGRTLSIEAIQAVQSLKRSHRSDPTN-NDAVSKTLSRLVKSDLVAA 293
           P+RCGPRDNRGPL KGR LSIEAIQA+QSLKR+HR DPT  +D +SKTLSRLVK+DL+A 
Sbjct: 30  PIRCGPRDNRGPLMKGRVLSIEAIQAIQSLKRAHRGDPTKIDDFLSKTLSRLVKADLLAT 89

Query: 294 FNELLRQDQFDLALKVFSAIRSEDWYKTDLNLYAKLVSSMASKGMTDDIDRLILDVEAED 473
            NELLRQDQ DLAL+VFSA+RSE WYKT+L+LYA LVS++A KGM ++IDRLI D+E E 
Sbjct: 90  LNELLRQDQCDLALRVFSAVRSELWYKTELSLYADLVSALARKGMKEEIDRLICDLEGEG 149

Query: 474 VSSADSKGLITLIKALIAADRAESTVRMYEMMKAGGWSCKSVTDDYVGKVLSRGLRRLGK 653
               D KG++ L+KA+IAA+R +STVR+Y +MK  G  C    D+YVG+VLSRGLRRLG+
Sbjct: 150 SVRCDDKGIVRLVKAVIAAERRDSTVRIYGLMKRSG--CGG-GDEYVGRVLSRGLRRLGE 206

Query: 654 TKVADEIDREIGRVSGGKLENMMA 725
             VADE+D E GR+S G LE + A
Sbjct: 207 LGVADEVDLEFGRLSKGNLEKVEA 230


>ref|XP_004141838.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g46870-like [Cucumis sativus]
           gi|449491766|ref|XP_004158997.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g46870-like [Cucumis sativus]
          Length = 230

 Score =  211 bits (538), Expect = 9e-53
 Identities = 123/233 (52%), Positives = 159/233 (68%), Gaps = 7/233 (3%)
 Frame = +3

Query: 24  MASSLR---LHLPFPFPCRRSTAIHPAGKPRCNFPVRCGPRDNRGPLHKGRTLSIEAIQA 194
           MASSL    L      P   STA  P      +F VRCGPRDNRGPL KGRTLSIEAIQA
Sbjct: 1   MASSLHSTFLKSQISIPIPASTATSPVA---VSFRVRCGPRDNRGPLVKGRTLSIEAIQA 57

Query: 195 VQSLKRSHRSDPTN-NDAVSKTLSRLVKSDLVAAFNELLRQDQFDLALKVFSAIRSEDWY 371
           +QSLKR+ RSDPT     +S TLSRL+K+DLVA   ELLRQ++  LAL+VF+ I+SE  Y
Sbjct: 58  IQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFAVIKSE--Y 115

Query: 372 KTDLNLYAKLVSSMASKGMTDDIDRLILDVEAEDVS---SADSKGLITLIKALIAADRAE 542
           + +L LYA++ ++++  G  ++IDRL+ D++  D       D KGLI LIKA+I+ +R E
Sbjct: 116 RAELGLYAEVAAALSRNGAAEEIDRLVSDLDGGDGVIEWGDDDKGLIKLIKAVISGNRRE 175

Query: 543 STVRMYEMMKAGGWSCKSVTDDYVGKVLSRGLRRLGKTKVADEIDREIGRVSG 701
           STVR+Y MM+  GW      DDY+ KVLS+GLRRLG+ ++ADEI+RE   + G
Sbjct: 176 STVRIYRMMRRKGWGSMIKADDYMIKVLSKGLRRLGEIELADEINREFEDLVG 228


>ref|XP_003530137.1| PREDICTED: uncharacterized protein LOC100799612 [Glycine max]
          Length = 240

 Score =  177 bits (450), Expect = 2e-42
 Identities = 102/196 (52%), Positives = 136/196 (69%), Gaps = 8/196 (4%)
 Frame = +3

Query: 120 VRCG-PRDNRGPLHKGRTLSIEAIQAVQSLKRSHRSDPTN-NDAVSKTLSRLVKSDLVAA 293
           VRCG PR  R PL KGR LSIEAIQA+Q+LKR HR++P N +  VS TL+RL+KSDL+A 
Sbjct: 29  VRCGGPRSQRSPLMKGRILSIEAIQAIQTLKRLHRTNPPNLSSLVSNTLTRLIKSDLLAT 88

Query: 294 FNELLRQDQFDLALKVFSAIRSEDWYKTDLNLYAKLVSSMASKG----MTDDIDRLILDV 461
             ELLRQ    +AL+ FS +RSE  Y  DL+LYA+++S++A+      MTD +DRLILD+
Sbjct: 89  LRELLRQQHCTIALRAFSTLRSE--YGADLSLYAEIISALAAAAAAAEMTDHVDRLILDL 146

Query: 462 EAE--DVSSADSKGLITLIKALIAADRAESTVRMYEMMKAGGWSCKSVTDDYVGKVLSRG 635
           EAE  ++   D KGL +LIKA++AA   ESTVR+Y +MK  G+   +  D+YV KVL  G
Sbjct: 147 EAENEEIKCDDHKGLASLIKAVVAARSRESTVRIYGLMKKSGYGSVTEPDEYVVKVLVNG 206

Query: 636 LRRLGKTKVADEIDRE 683
           L+  G+  +A E+  E
Sbjct: 207 LKSFGEEALARELQDE 222


>ref|XP_003626978.1| hypothetical protein MTR_8g013670 [Medicago truncatula]
           gi|355521000|gb|AET01454.1| hypothetical protein
           MTR_8g013670 [Medicago truncatula]
          Length = 239

 Score =  177 bits (449), Expect = 2e-42
 Identities = 112/235 (47%), Positives = 148/235 (62%), Gaps = 7/235 (2%)
 Frame = +3

Query: 24  MASSLRLHLPFPFPCRRSTAIHPAGKPRCNF-PVRCG-PRDNRGPLHKGRTLSIEAIQAV 197
           MASSL  +  F  P   S +I P+   R ++ PV CG PR  RGPL KGR LSIEAIQA+
Sbjct: 1   MASSLHQNPTFIKP-HSSPSIKPSTPTRRSYIPVHCGGPRSQRGPLIKGRFLSIEAIQAI 59

Query: 198 QSLKRSHRSDP---TNNDAVSKTLSRLVKSDLVAAFNELLRQDQFDLALKVFSAIRSEDW 368
           Q+LKR +R +P   T     +KTL+RL+KSDLVA   ELLRQ+Q  LAL+VFSA+RSE  
Sbjct: 60  QTLKRINRINPQTQTETQLQTKTLTRLIKSDLVATLKELLRQEQPTLALRVFSAVRSE-- 117

Query: 369 YKTDLNLYAKLVSSMASKGMTDDIDRLILDVEAEDVSSADS--KGLITLIKALIAADRAE 542
           Y  DL LYA+++  + + GM +D+DRLI ++E       D   KG+++LIKA+I A R +
Sbjct: 118 YGADLTLYAEMLKVLGNCGMYEDVDRLIEEIEVGGGIGCDEDPKGVLSLIKAVIGAKRRD 177

Query: 543 STVRMYEMMKAGGWSCKSVTDDYVGKVLSRGLRRLGKTKVADEIDREIGRVSGGK 707
             VR+YEM+K  GW      D+YV KVLS G +  G  ++A EI  +  R    K
Sbjct: 178 LLVRVYEMLKRSGWGEVVEFDEYVVKVLSNGFKGFGDDELAQEILNDYDRFCKAK 232


>gb|AFK40744.1| unknown [Medicago truncatula]
          Length = 263

 Score =  171 bits (432), Expect = 2e-40
 Identities = 107/215 (49%), Positives = 140/215 (65%), Gaps = 7/215 (3%)
 Frame = +3

Query: 24  MASSLRLHLPFPFPCRRSTAIHPAGKPRCNF-PVRCG-PRDNRGPLHKGRTLSIEAIQAV 197
           MASSL  +  F  P   S +I P+   R ++ PV CG PR  RGPL KGR LSIEAIQA+
Sbjct: 1   MASSLHQNPTFIKP-HSSPSIKPSTPTRRSYIPVHCGGPRSQRGPLIKGRFLSIEAIQAI 59

Query: 198 QSLKRSHRSDP---TNNDAVSKTLSRLVKSDLVAAFNELLRQDQFDLALKVFSAIRSEDW 368
           Q+LKR +R +P   T     +KTL+RL+KSDLVA   ELLRQ+Q  LAL+VFSA+RSE  
Sbjct: 60  QTLKRINRINPQTQTETQLQTKTLTRLIKSDLVATLKELLRQEQPTLALRVFSAVRSE-- 117

Query: 369 YKTDLNLYAKLVSSMASKGMTDDIDRLILDVEAEDVSSADS--KGLITLIKALIAADRAE 542
           Y  DL LYA+++  + + GM +D+DRLI ++E       D   KG+++LIKA+I A R +
Sbjct: 118 YGADLTLYAEMLKVLGNCGMYEDVDRLIEEIEVGGGIGCDEDPKGVLSLIKAVIGAKRRD 177

Query: 543 STVRMYEMMKAGGWSCKSVTDDYVGKVLSRGLRRL 647
             VR+YEM+K  GW      D+YV KVLS G + L
Sbjct: 178 LLVRVYEMLKRSGWGEVVEFDEYVVKVLSNGFKGL 212


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