BLASTX nr result

ID: Atractylodes22_contig00024628 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00024628
         (900 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36403.1| unknown [Lotus japonicus]                               94   3e-17
ref|XP_002894294.1| hypothetical protein ARALYDRAFT_892069 [Arab...    94   3e-17
ref|XP_003632859.1| PREDICTED: pentatricopeptide repeat-containi...    93   7e-17
ref|NP_175519.1| uncharacterized protein [Arabidopsis thaliana] ...    91   3e-16
ref|XP_002311900.1| predicted protein [Populus trichocarpa] gi|2...    91   5e-16

>gb|AFK36403.1| unknown [Lotus japonicus]
          Length = 281

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 41/71 (57%), Positives = 53/71 (74%)
 Frame = +3

Query: 684 NTKKTIRNNEMRARDRVIEFGKHKGKMLGMVSSEYLRWMSKNLKTGDMEKWGKLAEDVLE 863
           N K   R   + ARDRV++FGK+KGKMLG + S YL+W+SKNL+ GD E+W KLA+ VL 
Sbjct: 43  NCKSGRRETAVAARDRVVDFGKYKGKMLGSLPSSYLKWVSKNLRAGDSEEWAKLADQVLG 102

Query: 864 DEVYADRMEWE 896
           D +Y DR+EWE
Sbjct: 103 DPIYRDRIEWE 113


>ref|XP_002894294.1| hypothetical protein ARALYDRAFT_892069 [Arabidopsis lyrata subsp.
           lyrata] gi|297340136|gb|EFH70553.1| hypothetical protein
           ARALYDRAFT_892069 [Arabidopsis lyrata subsp. lyrata]
          Length = 288

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 40/61 (65%), Positives = 50/61 (81%)
 Frame = +3

Query: 714 MRARDRVIEFGKHKGKMLGMVSSEYLRWMSKNLKTGDMEKWGKLAEDVLEDEVYADRMEW 893
           + ARD +I+FGKHKGKMLG + S YL+W+SKNL+ GD E W KLA++VLED+VY DR EW
Sbjct: 61  LAARDTIIDFGKHKGKMLGTLPSSYLKWVSKNLRAGDSEYWAKLADEVLEDDVYKDRTEW 120

Query: 894 E 896
           E
Sbjct: 121 E 121


>ref|XP_003632859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62350-like [Vitis vinifera]
           gi|297743240|emb|CBI36107.3| unnamed protein product
           [Vitis vinifera]
          Length = 230

 Score = 93.2 bits (230), Expect = 7e-17
 Identities = 50/114 (43%), Positives = 71/114 (62%), Gaps = 3/114 (2%)
 Frame = -1

Query: 333 IVGAFNELLRQDQFNQARKVFSTIRS*DWYNTDLNLYTSVIDG---KGMTNDIAHLILGV 163
           ++   NELLRQDQ + A +VFS +RS  WY T+L+LY  ++     KGM  +I  LI  +
Sbjct: 86  LLATLNELLRQDQCDLALRVFSAVRSELWYKTELSLYADLVSALARKGMKEEIDRLICDL 145

Query: 162 EAEDVSSTDSKGLITLIKALIAAETAKSTVKMYEMMRTDGCCCKSVEDDYVGKV 1
           E E     D KG++ L+KA+IAAE   STV++Y +M+  GC      D+YVG+V
Sbjct: 146 EGEGSVRCDDKGIVRLVKAVIAAERRDSTVRIYGLMKRSGC---GGGDEYVGRV 196


>ref|NP_175519.1| uncharacterized protein [Arabidopsis thaliana]
           gi|12320781|gb|AAG50536.1|AC079828_7 hypothetical
           protein [Arabidopsis thaliana]
           gi|34146854|gb|AAQ62435.1| At1g51080 [Arabidopsis
           thaliana] gi|51969056|dbj|BAD43220.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332194499|gb|AEE32620.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 285

 Score = 91.3 bits (225), Expect = 3e-16
 Identities = 39/61 (63%), Positives = 49/61 (80%)
 Frame = +3

Query: 714 MRARDRVIEFGKHKGKMLGMVSSEYLRWMSKNLKTGDMEKWGKLAEDVLEDEVYADRMEW 893
           + ARD +I+FGKHKGKMLG + S YL+W+SKNL+ G  E W KLA++VLED+VY DR EW
Sbjct: 61  LAARDTIIDFGKHKGKMLGTLPSSYLKWVSKNLRAGVFEYWAKLADEVLEDDVYKDRTEW 120

Query: 894 E 896
           E
Sbjct: 121 E 121


>ref|XP_002311900.1| predicted protein [Populus trichocarpa] gi|222851720|gb|EEE89267.1|
           predicted protein [Populus trichocarpa]
          Length = 275

 Score = 90.5 bits (223), Expect = 5e-16
 Identities = 40/74 (54%), Positives = 53/74 (71%)
 Frame = +3

Query: 675 SSYNTKKTIRNNEMRARDRVIEFGKHKGKMLGMVSSEYLRWMSKNLKTGDMEKWGKLAED 854
           +S+   K ++       DRVI+FGK+KGKMLG + S YL+W+SKNL+ GD E W KLA+ 
Sbjct: 25  TSWPPNKPLKITTTPITDRVIDFGKYKGKMLGSLPSTYLKWVSKNLRAGDFEHWAKLADQ 84

Query: 855 VLEDEVYADRMEWE 896
           VL+D VY DR+EWE
Sbjct: 85  VLQDPVYKDRLEWE 98


Top