BLASTX nr result

ID: Atractylodes22_contig00024608 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00024608
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528295.1| transcription factor, putative [Ricinus comm...   103   1e-20
ref|XP_003616654.1| Zinc finger CCCH domain-containing protein [...   101   7e-20
ref|XP_004148184.1| PREDICTED: zinc finger CCCH domain-containin...    97   1e-18
ref|XP_004163130.1| PREDICTED: zinc finger CCCH domain-containin...    97   1e-18
ref|XP_002269430.1| PREDICTED: zinc finger CCCH domain-containin...    96   4e-18

>ref|XP_002528295.1| transcription factor, putative [Ricinus communis]
           gi|223532250|gb|EEF34053.1| transcription factor,
           putative [Ricinus communis]
          Length = 346

 Score =  103 bits (257), Expect = 1e-20
 Identities = 62/110 (56%), Positives = 73/110 (66%), Gaps = 5/110 (4%)
 Frame = +1

Query: 1   NTPTQLQSPTGHQQFRQTSNPLRAXXXXXXXXXXXVRKPTSYGFDSSAAVAQAVMNSRSG 180
           +TPTQLQSPTG  + RQ  N  R+           VRKP +YGFDSSAAVA A+MNSRS 
Sbjct: 152 STPTQLQSPTG-LEIRQNMNQFRSSYPTNLSSSP-VRKPAAYGFDSSAAVAAAMMNSRSS 209

Query: 181 SFAKQRSQSFVDRGA-----GATMSLRSMVPQQSSNLSEWGSPDGKLEWG 315
           +FAK RS SF+DRGA     G T +  S V   S+NLS+W SPDGKL+WG
Sbjct: 210 AFAK-RSHSFIDRGAATNRLGITAAANS-VSMMSANLSDWSSPDGKLDWG 257


>ref|XP_003616654.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|355517989|gb|AES99612.1| Zinc finger CCCH
           domain-containing protein [Medicago truncatula]
          Length = 668

 Score =  101 bits (251), Expect = 7e-20
 Identities = 63/116 (54%), Positives = 72/116 (62%), Gaps = 11/116 (9%)
 Frame = +1

Query: 1   NTPTQ-LQSPTGHQQFR-----QTSNPLRAXXXXXXXXXXXVRKPTSYGFDSSAAVAQAV 162
           +TPTQ + SP+  Q  +     Q  N LRA           VRKP+ YGFDSSAAVA AV
Sbjct: 467 STPTQQMHSPSAMQMRQNMNMGQNMNHLRASYPSNNMPSSPVRKPSPYGFDSSAAVAAAV 526

Query: 163 MNSRSGSFAKQRSQSFVDRGAGATMSLRSMVPQQ-----SSNLSEWGSPDGKLEWG 315
           MNSRS +FAKQRSQSF+DRGA AT  L    P       SS LS+WGSP GKL+WG
Sbjct: 527 MNSRSAAFAKQRSQSFIDRGA-ATHHLGLSPPSNPSCRVSSGLSDWGSPTGKLDWG 581


>ref|XP_004148184.1| PREDICTED: zinc finger CCCH domain-containing protein 29-like
           [Cucumis sativus]
          Length = 683

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 59/109 (54%), Positives = 72/109 (66%), Gaps = 8/109 (7%)
 Frame = +1

Query: 13  QLQSPTGHQQFRQTSNPLRAXXXXXXXXXXXVRKPTSYGFDSSAAVAQAVMNSRSGSFAK 192
           Q+QSPTG  Q RQ+ + LRA           V+KP+S+GFDSS+AVA AVMNSRS +FAK
Sbjct: 496 QVQSPTG-LQMRQSMSQLRASYPANNLSSSPVKKPSSFGFDSSSAVAAAVMNSRSAAFAK 554

Query: 193 QRSQSFVDRGA--------GATMSLRSMVPQQSSNLSEWGSPDGKLEWG 315
            RSQSF+DR A        GA  S  +M    SS+LS+W SPDGKL+WG
Sbjct: 555 -RSQSFIDRAAVSRLPGFTGAANSAATM----SSHLSDWNSPDGKLDWG 598


>ref|XP_004163130.1| PREDICTED: zinc finger CCCH domain-containing protein 29-like
           [Cucumis sativus]
          Length = 683

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 59/109 (54%), Positives = 71/109 (65%), Gaps = 8/109 (7%)
 Frame = +1

Query: 13  QLQSPTGHQQFRQTSNPLRAXXXXXXXXXXXVRKPTSYGFDSSAAVAQAVMNSRSGSFAK 192
           Q+QSPTG  Q RQ  + LRA           V+KP+S+GFDSS+AVA AVMNSRS +FAK
Sbjct: 496 QVQSPTG-LQMRQNMSQLRASYPANNLSSSPVKKPSSFGFDSSSAVAAAVMNSRSAAFAK 554

Query: 193 QRSQSFVDRGA--------GATMSLRSMVPQQSSNLSEWGSPDGKLEWG 315
            RSQSF+DR A        GA  S  +M    SS+LS+W SPDGKL+WG
Sbjct: 555 -RSQSFIDRAAVSRLPGFTGAANSAATM----SSHLSDWNSPDGKLDWG 598


>ref|XP_002269430.1| PREDICTED: zinc finger CCCH domain-containing protein 29-like
           [Vitis vinifera]
          Length = 689

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 62/108 (57%), Positives = 68/108 (62%), Gaps = 7/108 (6%)
 Frame = +1

Query: 13  QLQSPTGHQQFRQTSNPLRAXXXXXXXXXXX-VRKPTSYGFDSSAAVAQAVMNSRSGSFA 189
           QLQSPTG  Q RQ  N  RA            VRK +SYGFDSSAAVA AVMNSRS +FA
Sbjct: 498 QLQSPTG-LQMRQNMNQQRASYPTKTTVTSSPVRKTSSYGFDSSAAVAAAVMNSRSSAFA 556

Query: 190 KQRSQSFVDRGA------GATMSLRSMVPQQSSNLSEWGSPDGKLEWG 315
           K RSQSF+DRG       G T +  S     SSNLS+W SPDGKL+WG
Sbjct: 557 K-RSQSFIDRGGMSHRSPGFTAASNS-ATLMSSNLSDWSSPDGKLDWG 602


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