BLASTX nr result

ID: Atractylodes22_contig00024607 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00024607
         (916 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI14898.3| unnamed protein product [Vitis vinifera]              320   1e-89
ref|XP_002511274.1| replication factor C / DNA polymerase III ga...   317   2e-88
ref|XP_003528127.1| PREDICTED: uncharacterized protein LOC100812...   315   4e-86
ref|XP_003525530.1| PREDICTED: uncharacterized protein LOC100786...   313   1e-85
ref|XP_002321657.1| predicted protein [Populus trichocarpa] gi|2...   307   6e-84

>emb|CBI14898.3| unnamed protein product [Vitis vinifera]
          Length = 875

 Score =  320 bits (820), Expect(2) = 1e-89
 Identities = 154/224 (68%), Positives = 188/224 (83%)
 Frame = +3

Query: 6   YGSETTPFSESPRSLSQKFRPKSFSELVGQNVVTKSLLSTILSKMITSFYLFHGPRGTGK 185
           + +E TP+SESPRSLSQKFRPK+F+ELVGQNVV +SLL  I    ITSFYLFHGPRGTGK
Sbjct: 141 FNNEITPYSESPRSLSQKFRPKAFNELVGQNVVARSLLGAISRGRITSFYLFHGPRGTGK 200

Query: 186 TSAARIFAAALNCLSLEDNKPCGQCQECTLFFAGRSRDVKEVDSVSMNQAENLRYLIKNA 365
           TSA+RIFAAALNCLSLE+++PCG C+EC LFF+GRSRD KE+D+V +NQ   +R LIK+A
Sbjct: 201 TSASRIFAAALNCLSLEEHRPCGLCRECVLFFSGRSRDSKEIDTVRINQTGRMRSLIKHA 260

Query: 366 MLPPVSSSFKVFIIDECQQMQGSTWAALVNSLEEVSRHIVFIMITPDLSKLPRSAVPRSQ 545
           +  PVSS FKVFIIDEC  ++G TWA ++NSL+++ +H+VFIMITP L KLPRSAV RSQ
Sbjct: 261 IGRPVSSRFKVFIIDECHLLRGETWATVLNSLDDLPQHVVFIMITPSLDKLPRSAVSRSQ 320

Query: 546 RFHFPKISEADIVHRLGKICTEEGLDYDQVALDFIATRSIGPLR 677
           R+HFPKI +ADI  +LG+IC EE L++DQVALDFIA +S G LR
Sbjct: 321 RYHFPKIKDADIASKLGRICVEECLEFDQVALDFIAAKSNGSLR 364



 Score = 37.0 bits (84), Expect(2) = 1e-89
 Identities = 21/38 (55%), Positives = 25/38 (65%)
 Frame = +2

Query: 677 QLSLLGKRITMSLTYELAEIVMREAGNRGMSDEVIDFV 790
           QLSLLGKRITMS+TYEL  IV          DE++D +
Sbjct: 372 QLSLLGKRITMSMTYELIGIV--------SDDELLDLL 401


>ref|XP_002511274.1| replication factor C / DNA polymerase III gamma-tau subunit,
           putative [Ricinus communis] gi|223550389|gb|EEF51876.1|
           replication factor C / DNA polymerase III gamma-tau
           subunit, putative [Ricinus communis]
          Length = 1025

 Score =  317 bits (811), Expect(2) = 2e-88
 Identities = 152/216 (70%), Positives = 178/216 (82%)
 Frame = +3

Query: 30  SESPRSLSQKFRPKSFSELVGQNVVTKSLLSTILSKMITSFYLFHGPRGTGKTSAARIFA 209
           +ESPRS SQKFRPKSF ELVGQNVV +SLLS I    +TS YLFHGPRGTGKTSA+RIFA
Sbjct: 289 NESPRSFSQKFRPKSFEELVGQNVVVRSLLSAIAQGRVTSLYLFHGPRGTGKTSASRIFA 348

Query: 210 AALNCLSLEDNKPCGQCQECTLFFAGRSRDVKEVDSVSMNQAENLRYLIKNAMLPPVSSS 389
           AALNCLSLE+ KPCG C+EC  FF+GRSRDVKEVDSV +N+ E +R LIKNA +PPVSS 
Sbjct: 349 AALNCLSLEEYKPCGLCRECVQFFSGRSRDVKEVDSVRINRVERIRALIKNAAIPPVSSR 408

Query: 390 FKVFIIDECQQMQGSTWAALVNSLEEVSRHIVFIMITPDLSKLPRSAVPRSQRFHFPKIS 569
           FKVFI+DEC  +QG TWA ++NSLE + +H+VF+M+TP L KLPRSAV  SQ++HFPKI 
Sbjct: 409 FKVFIVDECHLLQGETWATILNSLENLPQHVVFVMVTPHLDKLPRSAVTHSQKYHFPKIK 468

Query: 570 EADIVHRLGKICTEEGLDYDQVALDFIATRSIGPLR 677
           +ADI  RL  IC EEG+D+DQVALDFIA +S G LR
Sbjct: 469 DADIAVRLKNICIEEGIDFDQVALDFIAAKSNGSLR 504



 Score = 36.6 bits (83), Expect(2) = 2e-88
 Identities = 20/38 (52%), Positives = 25/38 (65%)
 Frame = +2

Query: 677 QLSLLGKRITMSLTYELAEIVMREAGNRGMSDEVIDFV 790
           Q+SLLGKRITMSL YELA +V          DE++D +
Sbjct: 512 QMSLLGKRITMSLAYELAGVV--------SDDELLDLL 541


>ref|XP_003528127.1| PREDICTED: uncharacterized protein LOC100812040 [Glycine max]
          Length = 979

 Score =  315 bits (806), Expect(2) = 4e-86
 Identities = 150/225 (66%), Positives = 186/225 (82%)
 Frame = +3

Query: 3   HYGSETTPFSESPRSLSQKFRPKSFSELVGQNVVTKSLLSTILSKMITSFYLFHGPRGTG 182
           H G   +P  E+PRSLS KFRPKSFS+LVGQNVV +SLL+ I    ITSFYLF+GPRGTG
Sbjct: 285 HNGGGISPTLETPRSLSMKFRPKSFSDLVGQNVVVRSLLAAISRGRITSFYLFYGPRGTG 344

Query: 183 KTSAARIFAAALNCLSLEDNKPCGQCQECTLFFAGRSRDVKEVDSVSMNQAENLRYLIKN 362
           KTS +R+FAAALNCLS+ + +PCG C+EC L F+GR++DVKEVDSV++N+AE ++ LIKN
Sbjct: 345 KTSTSRMFAAALNCLSVVEKRPCGLCRECVLLFSGRNKDVKEVDSVTINRAEQVKSLIKN 404

Query: 363 AMLPPVSSSFKVFIIDECQQMQGSTWAALVNSLEEVSRHIVFIMITPDLSKLPRSAVPRS 542
           A +PPVSS FKVFIIDECQ + G TWA++ NSLE +S+H+VF+MITPDL KLPRSAV R+
Sbjct: 405 ASIPPVSSRFKVFIIDECQLLNGETWASISNSLENLSQHVVFVMITPDLDKLPRSAVSRA 464

Query: 543 QRFHFPKISEADIVHRLGKICTEEGLDYDQVALDFIATRSIGPLR 677
           QR+HFPK+ +ADIV RL KIC EEGLD++Q ALDFI  +S G +R
Sbjct: 465 QRYHFPKVKDADIVCRLEKICAEEGLDFEQDALDFIGAKSCGSVR 509



 Score = 30.8 bits (68), Expect(2) = 4e-86
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = +2

Query: 677 QLSLLGKRITMSLTYELAEIVMREAGNRGMSDEVIDFV 790
           Q+SLLGK+I +SL YEL  IV          DE++D +
Sbjct: 517 QMSLLGKKINISLAYELTGIV--------SDDELLDLL 546


>ref|XP_003525530.1| PREDICTED: uncharacterized protein LOC100786687 [Glycine max]
          Length = 976

 Score =  313 bits (801), Expect(2) = 1e-85
 Identities = 151/225 (67%), Positives = 183/225 (81%)
 Frame = +3

Query: 3   HYGSETTPFSESPRSLSQKFRPKSFSELVGQNVVTKSLLSTILSKMITSFYLFHGPRGTG 182
           H G E +P SE+PRSLS KFRPKSFS+LVGQNV+ KSLL  I +  I+SFY+FHGPRGTG
Sbjct: 278 HIGVEISPTSETPRSLSMKFRPKSFSDLVGQNVIGKSLLGAISTGRISSFYIFHGPRGTG 337

Query: 183 KTSAARIFAAALNCLSLEDNKPCGQCQECTLFFAGRSRDVKEVDSVSMNQAENLRYLIKN 362
           KTSA+RIFAAA+NCLS  + KPCG C+EC LFF GRS++VKEVDS+ +N+A+ ++ L+K+
Sbjct: 338 KTSASRIFAAAMNCLSPLEQKPCGLCRECVLFFLGRSKNVKEVDSLRINRADKVKSLVKS 397

Query: 363 AMLPPVSSSFKVFIIDECQQMQGSTWAALVNSLEEVSRHIVFIMITPDLSKLPRSAVPRS 542
           A +PP SSSFKVFI+DECQ + G TWA L+N LE VS  +VF+MITPDL KLPRSAV R+
Sbjct: 398 ACIPPASSSFKVFIVDECQVLHGETWACLLNCLENVSPRVVFVMITPDLDKLPRSAVSRA 457

Query: 543 QRFHFPKISEADIVHRLGKICTEEGLDYDQVALDFIATRSIGPLR 677
           QR+HF KI +ADI  RL KIC EEGL+ +QVALDFIA RS G LR
Sbjct: 458 QRYHFAKIKDADIARRLKKICVEEGLESEQVALDFIAARSCGSLR 502



 Score = 30.8 bits (68), Expect(2) = 1e-85
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = +2

Query: 677 QLSLLGKRITMSLTYELAEIVMREAGNRGMSDEVIDFV 790
           QLSLLGK+IT+SL +EL  ++          DE++D +
Sbjct: 510 QLSLLGKKITISLVHELTGVI--------SDDELLDLL 539


>ref|XP_002321657.1| predicted protein [Populus trichocarpa] gi|222868653|gb|EEF05784.1|
           predicted protein [Populus trichocarpa]
          Length = 907

 Score =  307 bits (786), Expect(2) = 6e-84
 Identities = 148/216 (68%), Positives = 177/216 (81%)
 Frame = +3

Query: 30  SESPRSLSQKFRPKSFSELVGQNVVTKSLLSTILSKMITSFYLFHGPRGTGKTSAARIFA 209
           +E+PRSLSQKFRPKSF ELVGQ VV +SLL  I    ITS YLFHGPRGTGKTSA++IFA
Sbjct: 245 NETPRSLSQKFRPKSFDELVGQGVVARSLLGAISRGRITSLYLFHGPRGTGKTSASKIFA 304

Query: 210 AALNCLSLEDNKPCGQCQECTLFFAGRSRDVKEVDSVSMNQAENLRYLIKNAMLPPVSSS 389
           AALNCLS E+NKPCG C+EC +FF+GRS+DVKEVDSV +NQ   +R LIK+A +PP+SS 
Sbjct: 305 AALNCLSHEENKPCGLCRECYVFFSGRSQDVKEVDSVRINQTRRIRSLIKDASMPPISSR 364

Query: 390 FKVFIIDECQQMQGSTWAALVNSLEEVSRHIVFIMITPDLSKLPRSAVPRSQRFHFPKIS 569
           FKVFI+DEC  + G TWA ++NSLE +S ++VF+MITP+L  LP+SAV RSQ++HFPKI 
Sbjct: 365 FKVFIVDECHLLHGETWAIVLNSLENLSENVVFVMITPELDMLPKSAVTRSQKYHFPKIK 424

Query: 570 EADIVHRLGKICTEEGLDYDQVALDFIATRSIGPLR 677
           EADI  RL  IC EE LD+DQVALDFIAT+S G LR
Sbjct: 425 EADIAGRLRNICVEEALDFDQVALDFIATKSSGSLR 460



 Score = 31.2 bits (69), Expect(2) = 6e-84
 Identities = 14/21 (66%), Positives = 18/21 (85%)
 Frame = +2

Query: 677 QLSLLGKRITMSLTYELAEIV 739
           QLSLLGKRITM++ +EL  +V
Sbjct: 468 QLSLLGKRITMTMVHELIGVV 488


Top