BLASTX nr result

ID: Atractylodes22_contig00024585 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00024585
         (1012 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK44009.1| unknown [Lotus japonicus]                              230   5e-58
ref|XP_003518992.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   229   1e-57
ref|XP_002323210.1| predicted protein [Populus trichocarpa] gi|2...   229   1e-57
ref|XP_002308856.1| predicted protein [Populus trichocarpa] gi|2...   224   3e-56
ref|XP_003556948.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   222   1e-55

>gb|AFK44009.1| unknown [Lotus japonicus]
          Length = 293

 Score =  230 bits (586), Expect = 5e-58
 Identities = 120/274 (43%), Positives = 164/274 (59%), Gaps = 21/274 (7%)
 Frame = +1

Query: 67  SNNRSTHWCYTCRQLVTLVRRNQVCCECGGGFVQELENILSTN-------NDVEDQNPRS 225
           SN+R+THWC++CR+ V L  R+ +C  C  GFVQEL++++  N       ++ E+   R 
Sbjct: 2   SNSRNTHWCHSCRRPVRLGWRDSICRSCNEGFVQELDDMVPVNPLDLVGLDNNEEHGQRF 61

Query: 226 GIMETFSSFFRRQEMQQNSSNH--REQQDVVSGDGDNSMWGPWPIYTGDMPVSIPNNGGL 399
           G+METFS F R Q M   S  H  R Q D +   G    + P  I+ G +P  +  +GG+
Sbjct: 62  GLMETFSGFMRHQ-MGNRSHRHDIRAQPDSIPEQGAG--FAPLLIFGGQIPFRLSGHGGI 118

Query: 400 FELFNEV--LGFRRENGADIFVGPGVEEFFEQFNSRDQEVPPPASKSSIDALPTVRISKK 573
             LFN    +G  R N  D F+GPG+EE FEQ +  +Q+ PPPAS+SSIDALPT+RI K+
Sbjct: 119 EALFNGAPGIGMTRGNTGDYFIGPGLEEMFEQLSINNQQGPPPASRSSIDALPTIRIVKR 178

Query: 574 DARSDSHCAVCKEKLILGSSVKKLPCKHLYHSGCIAPWLAQVSSCPVCRREVTPK----- 738
             RSDSHC +CKEK  LGS  +++PCKH+YH  CI PWL + +SCPVCR+E+ P+     
Sbjct: 179 HLRSDSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQELPPQVLSGS 238

Query: 739 -----XXXXXXXXXXXXXNRVRHSPWSFLWPFGS 825
                             N+ R +P+SFLWPF S
Sbjct: 239 NGRRSRSSNANERVSSRENQGRRNPFSFLWPFRS 272


>ref|XP_003518992.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
          Length = 309

 Score =  229 bits (583), Expect = 1e-57
 Identities = 120/292 (41%), Positives = 170/292 (58%), Gaps = 32/292 (10%)
 Frame = +1

Query: 67  SNNRSTHWCYTCRQLVTLVRRNQVCCECGGGFVQELENILSTN-------NDVEDQNPRS 225
           SN+R+THWCY+CR+ V L RR+ VC  C  GFV EL +++  N       ++ E+++ R 
Sbjct: 2   SNSRNTHWCYSCRRPVWLGRRDAVCPSCNEGFVHELNDMVHVNPFDLFEMDNNEERDQRL 61

Query: 226 GIMETFSSFFRRQEMQQNSSNHREQQDVVSGDGDNSMWGPWPIYTGDMPVSIPNNGGLFE 405
           G+METFS+F R Q M     +H  +    S    ++ + P  I+ G +P  +  +GG   
Sbjct: 62  GLMETFSAFMRHQ-MADRGRSHDIRAQTDSNPEHSAGFAPLLIFGGQIPFRLSGHGGFEA 120

Query: 406 LFNEV--LGFRRENGADIFVGPGVEEFFEQFNSRDQEVPPPASKSSIDALPTVRISKKDA 579
           LFN    +G  R N  D F+GPG+EE FEQ ++ +++ PPPAS+SSIDA+PT++I+++  
Sbjct: 121 LFNGAPGIGLTRGNTGDYFIGPGLEELFEQLSANNRQGPPPASRSSIDAMPTIKITQRHL 180

Query: 580 RSDSHCAVCKEKLILGSSVKKLPCKHLYHSGCIAPWLAQVSSCPVCRREVTPKXXXXXXX 759
           RSDSHC VCK+K  +GS  +++PC HLYHS CI PWL Q +SCPVCR+E+ P+       
Sbjct: 181 RSDSHCPVCKDKFEVGSEARQMPCNHLYHSDCIVPWLVQHNSCPVCRQELLPQGLSSSNR 240

Query: 760 XXXXXXNRV-----------RHSPWSFLWPF------------GS*SPTHTI 846
                               R +P+SFLWPF            GS SPT TI
Sbjct: 241 STNGRSRSASLSSSGRESHGRRNPFSFLWPFRSSHSSSNDEATGSSSPTPTI 292


>ref|XP_002323210.1| predicted protein [Populus trichocarpa] gi|222867840|gb|EEF04971.1|
           predicted protein [Populus trichocarpa]
          Length = 308

 Score =  229 bits (583), Expect = 1e-57
 Identities = 119/275 (43%), Positives = 161/275 (58%), Gaps = 22/275 (8%)
 Frame = +1

Query: 67  SNNRSTHWCYTCRQLVTLVRRNQVCCECGGGFVQELENILSTN-------NDVEDQNPRS 225
           S++R+THWCY+CR+ V L  R+  C  C GGFVQEL+++   +       +  +D++ R 
Sbjct: 2   SSSRNTHWCYSCRRPVRLRGRDSACPYCSGGFVQELDDMHRISPLDFFGMDSDDDRDQRF 61

Query: 226 GIMETFSSFFRRQEMQQNSSNHREQQDVVSGDGDNSMWGPWPIYTGDMPVSIPNNGGLFE 405
           G+ME FS F R Q M   S NH  +    S  G N  +GP  I+ G +P  +  NGG   
Sbjct: 62  GLMEAFSDFMR-QRMADRSHNHDIRSRSDSVPGHNPGFGPLLIFGGQVPFRLSGNGGFEA 120

Query: 406 LFNEVLG--FRRENGADIFVGPGVEEFFEQFNSRDQEVPPPASKSSIDALPTVRISKKDA 579
           LF+   G  F R N  D F+GPG+EE FEQ ++ DQ  PPPA++SSIDA+PT++I++K  
Sbjct: 121 LFSGAPGVAFARGNAGDYFIGPGLEELFEQLSANDQRGPPPATRSSIDAMPTIKITQKHL 180

Query: 580 RSDSHCAVCKEKLILGSSVKKLPCKHLYHSGCIAPWLAQVSSCPVCRREVTPKXXXXXXX 759
           RSDSHC VCK+K  LGS  +++PC HLYHS CI PWL Q +SCPVCR+E+ P+       
Sbjct: 181 RSDSHCPVCKDKFELGSEARQMPCDHLYHSDCIVPWLVQHNSCPVCRQELPPQGSSSRHS 240

Query: 760 XXXXXXNR-------------VRHSPWSFLWPFGS 825
                                 R +P S+LWPF S
Sbjct: 241 YQSSSSRSRSSNYSGRENSRGGRRNPLSYLWPFRS 275


>ref|XP_002308856.1| predicted protein [Populus trichocarpa] gi|222854832|gb|EEE92379.1|
           predicted protein [Populus trichocarpa]
          Length = 311

 Score =  224 bits (570), Expect = 3e-56
 Identities = 119/275 (43%), Positives = 160/275 (58%), Gaps = 22/275 (8%)
 Frame = +1

Query: 67  SNNRSTHWCYTCRQLVTLVRRNQVCCECGGGFVQELENILSTN-------NDVEDQNPRS 225
           S++R+THWCY+CR+ V L  R+  C  C GGFVQEL+++   N       +  +D +   
Sbjct: 5   SSSRNTHWCYSCRRPVRLRGRDAACPYCSGGFVQELDDMHRINPLDFFGMDGDDDHDNMF 64

Query: 226 GIMETFSSFFRRQEMQQNSSNHREQQDVVSGDGDNSMWGPWPIYTGDMPVSIPNNGGLFE 405
           G+ME FS+F R Q M   S NH  +    S    N  +GP  I+ G +P  +  NGGL  
Sbjct: 65  GLMEAFSAFMR-QRMADRSHNHDIRSRSDSIPEHNPGFGPLLIFGGQIPFRLSGNGGLEA 123

Query: 406 LFNEVLG--FRRENGADIFVGPGVEEFFEQFNSRDQEVPPPASKSSIDALPTVRISKKDA 579
           LF+   G  F R N  D FVGPG+EE FEQ ++ D+  PPPA++SSIDA+PT++I++K  
Sbjct: 124 LFSGSPGVAFARGNAGDYFVGPGLEELFEQLSANDRRGPPPATRSSIDAMPTIKITQKHL 183

Query: 580 RSDSHCAVCKEKLILGSSVKKLPCKHLYHSGCIAPWLAQVSSCPVCRREVTPK------- 738
           RSDSHC VCK+K  LGS  +++PC HLYHS CI PWL Q +SCPVCR+E+ P+       
Sbjct: 184 RSDSHCPVCKDKFELGSEARQMPCDHLYHSDCIVPWLVQHNSCPVCRQELPPQGSNSGHS 243

Query: 739 ------XXXXXXXXXXXXXNRVRHSPWSFLWPFGS 825
                                 R +P S+LWPF S
Sbjct: 244 YQSSSSRSRSSNYSGRENSREGRRNPLSYLWPFRS 278


>ref|XP_003556948.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1
           [Glycine max] gi|356577674|ref|XP_003556949.1|
           PREDICTED: E3 ubiquitin-protein ligase RING1-like
           isoform 2 [Glycine max]
          Length = 309

 Score =  222 bits (565), Expect = 1e-55
 Identities = 119/292 (40%), Positives = 168/292 (57%), Gaps = 32/292 (10%)
 Frame = +1

Query: 67  SNNRSTHWCYTCRQLVTLVRRNQVCCECGGGFVQELENILSTN-------NDVEDQNPRS 225
           SN+R+THWCY+CR+ V L RR+ VC  C  GFV EL +I+  N       ++ E+++ R 
Sbjct: 2   SNSRNTHWCYSCRRPVRLGRRDVVCPSCNLGFVHELNDIVHVNPFDLFGMDNNEERDQRL 61

Query: 226 GIMETFSSFFRRQEMQQNSSNHREQQDVVSGDGDNSMWGPWPIYTGDMPVSIPNNGGLFE 405
           G+METFS+F R Q M     +H  +    S    ++ + P  I+ G +P  +  +GG   
Sbjct: 62  GLMETFSAFMRHQ-MADRGRSHDIRVRTDSNPEHSASFAPLLIFGGHIPFRLSRHGGFEA 120

Query: 406 LFNEV--LGFRRENGADIFVGPGVEEFFEQFNSRDQEVPPPASKSSIDALPTVRISKKDA 579
           LFN    +G  + N  D F+GPG+EE FEQ ++ +++ P PAS+SSIDA+PT++I ++  
Sbjct: 121 LFNGAPGIGLTQGNTGDYFIGPGLEELFEQLSANNRQGPLPASRSSIDAMPTIKIVQRHL 180

Query: 580 RSDSHCAVCKEKLILGSSVKKLPCKHLYHSGCIAPWLAQVSSCPVCRREVTPKXXXXXXX 759
           RSDSHC VCK+K  LGS  +++PC HLYHS CI PWL Q +SCPVCR+E+ P+       
Sbjct: 181 RSDSHCPVCKDKFELGSKARQMPCNHLYHSDCIVPWLVQHNSCPVCRQELPPQGLSSSNG 240

Query: 760 XXXXXXNRV-----------RHSPWSFLWPF------------GS*SPTHTI 846
                               R +P+SFLWPF            GS +PT TI
Sbjct: 241 GANGRSRSARVSSSGRESHGRRNPFSFLWPFRSSHSSSNDEATGSSTPTPTI 292


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