BLASTX nr result

ID: Atractylodes22_contig00024564 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00024564
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69469.1| hypothetical protein VITISV_042556 [Vitis vinifera]   103   2e-20
ref|XP_002276086.2| PREDICTED: uncharacterized protein LOC100246...   100   1e-19
ref|XP_002304143.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-17
ref|XP_002299596.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-17
ref|XP_003529827.1| PREDICTED: uncharacterized protein LOC100801...    92   6e-17

>emb|CAN69469.1| hypothetical protein VITISV_042556 [Vitis vinifera]
          Length = 403

 Score =  103 bits (256), Expect = 2e-20
 Identities = 51/82 (62%), Positives = 65/82 (79%), Gaps = 4/82 (4%)
 Frame = +2

Query: 149 TPSSRGKLSNGLKRSVRFYPVSVIVDEDCQPCGHKSLYEE----ETGKHSINKEFQVDLS 316
           TPSSRGKLSNG KRSVRFYPVSVIVDEDC+PCGHK LYE+     T  + IN++ ++++ 
Sbjct: 261 TPSSRGKLSNGTKRSVRFYPVSVIVDEDCRPCGHKCLYEDGKPIRTVTNFINEDIKLNID 320

Query: 317 EKKRHIEQVARNMLKNYQKKIE 382
             +R +E+ AR++LKNYQKK E
Sbjct: 321 HNRR-VEEAARDLLKNYQKKNE 341


>ref|XP_002276086.2| PREDICTED: uncharacterized protein LOC100246362 [Vitis vinifera]
          Length = 403

 Score =  100 bits (250), Expect = 1e-19
 Identities = 50/82 (60%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
 Frame = +2

Query: 149 TPSSRGKLSNGLKRSVRFYPVSVIVDEDCQPCGHKSLYEE----ETGKHSINKEFQVDLS 316
           TPSSR KLSNG KRSVRFYPVSVIVDEDC+PCGHK LYE+     T  + IN++ ++++ 
Sbjct: 261 TPSSRSKLSNGTKRSVRFYPVSVIVDEDCRPCGHKCLYEDGKPIRTVTNFINEDIKLNID 320

Query: 317 EKKRHIEQVARNMLKNYQKKIE 382
             +R +E+ AR++LKNYQKK E
Sbjct: 321 HNRR-VEEAARDLLKNYQKKNE 341


>ref|XP_002304143.1| predicted protein [Populus trichocarpa] gi|222841575|gb|EEE79122.1|
           predicted protein [Populus trichocarpa]
          Length = 453

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 53/103 (51%), Positives = 66/103 (64%), Gaps = 21/103 (20%)
 Frame = +2

Query: 149 TPSSRG-KLS--NGLKRSVRFYPVSVIVDEDCQPCGHKSLYEEETGKHS----------- 286
           TPSSRG KLS  NG KRSVRFYPVSVIVDEDC+PCGHKSLY  +  + S           
Sbjct: 278 TPSSRGGKLSSNNGAKRSVRFYPVSVIVDEDCRPCGHKSLYGSDCQELSSTLVAATVTTD 337

Query: 287 -------INKEFQVDLSEKKRHIEQVARNMLKNYQKKIEREFN 394
                    +E +  ++ + R IE+VARN+LKNYQ+K E +F+
Sbjct: 338 TRNNVPTSGEELKFHVTNENRRIEEVARNLLKNYQRKKEEQFD 380


>ref|XP_002299596.1| predicted protein [Populus trichocarpa] gi|222846854|gb|EEE84401.1|
           predicted protein [Populus trichocarpa]
          Length = 380

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 50/81 (61%), Positives = 62/81 (76%), Gaps = 3/81 (3%)
 Frame = +2

Query: 149 TPSSRG-KLS--NGLKRSVRFYPVSVIVDEDCQPCGHKSLYEEETGKHSINKEFQVDLSE 319
           TPSSRG KLS  NG KRSVRFYPVSVIVDEDC+PCGHK+LY  +  + S   + ++ +  
Sbjct: 242 TPSSRGGKLSSNNGAKRSVRFYPVSVIVDEDCRPCGHKNLYGSDRQEMS---KLKLHVMN 298

Query: 320 KKRHIEQVARNMLKNYQKKIE 382
           + R IE+VAR++LKNYQKK E
Sbjct: 299 ENRRIEEVARDLLKNYQKKKE 319


>ref|XP_003529827.1| PREDICTED: uncharacterized protein LOC100801760 [Glycine max]
          Length = 413

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 46/83 (55%), Positives = 65/83 (78%), Gaps = 1/83 (1%)
 Frame = +2

Query: 149 TPSSRGKLSNGLKRSVRFYPVSVIVDEDCQPCGHKSLYE-EETGKHSINKEFQVDLSEKK 325
           TPSSR    +G KRSVRF PVSVIVDEDC+PCGHK+L+E EE+   + ++E ++ + ++ 
Sbjct: 272 TPSSR----SGAKRSVRFCPVSVIVDEDCRPCGHKNLHEGEESNGKNRSEELRLHVMQES 327

Query: 326 RHIEQVARNMLKNYQKKIEREFN 394
           R +E++AR++LKNYQKK E EF+
Sbjct: 328 RRVEELARDLLKNYQKKSEVEFD 350


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