BLASTX nr result

ID: Atractylodes22_contig00024561 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00024561
         (724 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316660.1| predicted protein [Populus trichocarpa] gi|2...   159   5e-37
ref|XP_002524681.1| conserved hypothetical protein [Ricinus comm...   156   5e-36
ref|XP_002305655.1| f-box family protein [Populus trichocarpa] g...   152   9e-35
ref|XP_003634996.1| PREDICTED: F-box protein SKIP27-like [Vitis ...   150   2e-34
ref|XP_002274518.1| PREDICTED: F-box protein At1g61340-like [Vit...   149   4e-34

>ref|XP_002316660.1| predicted protein [Populus trichocarpa] gi|222859725|gb|EEE97272.1|
           predicted protein [Populus trichocarpa]
          Length = 189

 Score =  159 bits (402), Expect = 5e-37
 Identities = 93/160 (58%), Positives = 121/160 (75%), Gaps = 10/160 (6%)
 Frame = +3

Query: 243 GKNYSLGL-VKRTSSFGRKRIL----ILNEMEIDSIDS--ISPMKKRSIGNNVGPERSLL 401
           G+   LGL   R+ SFGRKR+L    ILN+ ++ ++DS  IS +K+     ++ PE+S L
Sbjct: 23  GEEEGLGLKFVRSYSFGRKRVLSSNNILNDEDLLNLDSTFISSLKRL---RSLKPEKSNL 79

Query: 402 EALPEDILIRVLCGVEHDDLKRLFHVSKPIREAAMVAKKLHFAYSTPKKVPAFRSAID-- 575
           E+LP+DILIRVLCGV+HDDLK+LFHVSK IREA ++AK+ HFAYSTP+K  AFR+ ID  
Sbjct: 80  ESLPQDILIRVLCGVDHDDLKQLFHVSKVIREATLIAKEWHFAYSTPRKTQAFRTRIDFG 139

Query: 576 -PSSLEVDEIEAPNAPRQSRAGRSRLNRKKLADLSVALFS 692
            PS L  DEIEAPNAP+Q R+ +S LNRK +AD+SVALF+
Sbjct: 140 NPSGL--DEIEAPNAPKQRRSYKSLLNRKSIADVSVALFA 177


>ref|XP_002524681.1| conserved hypothetical protein [Ricinus communis]
           gi|223536042|gb|EEF37700.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 221

 Score =  156 bits (394), Expect = 5e-36
 Identities = 87/165 (52%), Positives = 113/165 (68%), Gaps = 20/165 (12%)
 Frame = +3

Query: 258 LGLVKRTSSFGRKRILILNEMEIDSIDSI------------------SPMKKRSIGNNVG 383
           LG V+ T SFGRKRI+I N +++ ++DS                   +P+K+     ++ 
Sbjct: 26  LGCVRYTRSFGRKRIVISNAVDLLTLDSPIKTPLKRLCSLEPENPIKTPLKRLC---SLE 82

Query: 384 PERSLLEALPEDILIRVLCGVEHDDLKRLFHVSKPIREAAMVAKKLHFAYSTPKKVPAFR 563
           PE+S LE LP+DIL+RVLC V HDDLK+LFHVS  IREA +VA+KLHFAYSTP+K+PAFR
Sbjct: 83  PEKSTLETLPQDILVRVLCCVNHDDLKQLFHVSTAIREATLVARKLHFAYSTPRKIPAFR 142

Query: 564 SAI--DPSSLEVDEIEAPNAPRQSRAGRSRLNRKKLADLSVALFS 692
           + I    +  E DE EAPNAP+ SR  +SRLNRK L D+SVALF+
Sbjct: 143 TPIASTENPTEFDEFEAPNAPKVSRCYKSRLNRKNLMDISVALFA 187


>ref|XP_002305655.1| f-box family protein [Populus trichocarpa]
           gi|222848619|gb|EEE86166.1| f-box family protein
           [Populus trichocarpa]
          Length = 189

 Score =  152 bits (383), Expect = 9e-35
 Identities = 85/147 (57%), Positives = 112/147 (76%), Gaps = 7/147 (4%)
 Frame = +3

Query: 273 RTSSFGRKRILI----LNEMEIDSIDSI--SPMKKRSIGNNVGPERSLLEALPEDILIRV 434
           R+ SFGRKRIL     +N  ++ ++DS   SP+K+     ++ PE+S LE+LP+DILIRV
Sbjct: 34  RSYSFGRKRILSTKNNVNSEDLLNLDSTFKSPLKRLC---SLEPEKSNLESLPQDILIRV 90

Query: 435 LCGVEHDDLKRLFHVSKPIREAAMVAKKLHFAYSTPKKVPAFRSAID-PSSLEVDEIEAP 611
           LC V+HDDLK+LFHVSK IREA ++AK+ HFAYSTP+K   FRS  D  +  E+DEIEAP
Sbjct: 91  LCRVDHDDLKQLFHVSKVIREATLIAKESHFAYSTPRKSQGFRSPFDLENPGELDEIEAP 150

Query: 612 NAPRQSRAGRSRLNRKKLADLSVALFS 692
           NAP+Q R+ +SRLNRK +AD+SVALF+
Sbjct: 151 NAPKQRRSYKSRLNRKSIADVSVALFA 177


>ref|XP_003634996.1| PREDICTED: F-box protein SKIP27-like [Vitis vinifera]
          Length = 172

 Score =  150 bits (380), Expect = 2e-34
 Identities = 86/173 (49%), Positives = 115/173 (66%), Gaps = 16/173 (9%)
 Frame = +3

Query: 234 MALGKNYS-----------LGLVKRTSSFGRKRILILNEMEIDSIDSI--SPMKKRSIGN 374
           MALG+ +            LG    T S  RKRIL+ +  E  S  S+  +P+K+R  G 
Sbjct: 1   MALGRRHGSQMKGGDEELGLGFAPVTRSLSRKRILVSSNTESSSPSSVLRTPLKRRC-GE 59

Query: 375 NVGP--ERSLLEALPEDILIRVLCGVEHDDLKRLFHVSKPIREAAMVAKKLHFAYSTPKK 548
            V    E+S+LEA+P+DILIR+LCGV+HDDLK+LFHVS  IR+A ++AKK HFAYSTP K
Sbjct: 60  MVEEKAEKSMLEAMPQDILIRILCGVDHDDLKQLFHVSNTIRDATLIAKKSHFAYSTPSK 119

Query: 549 VPAFRSAIDP-SSLEVDEIEAPNAPRQSRAGRSRLNRKKLADLSVALFSDDME 704
           V  FRS +DP  S   D+++ P+AP+QSR  RSRL  +KL+ +++ALFS D E
Sbjct: 120 VQTFRSPLDPEESSGFDDLQTPDAPKQSRHFRSRLRGRKLSGIAIALFSSDEE 172


>ref|XP_002274518.1| PREDICTED: F-box protein At1g61340-like [Vitis vinifera]
          Length = 172

 Score =  149 bits (377), Expect = 4e-34
 Identities = 85/173 (49%), Positives = 116/173 (67%), Gaps = 16/173 (9%)
 Frame = +3

Query: 234 MALGKNYS-----------LGLVKRTSSFGRKRILILNEMEIDSIDSI--SPMKKRSIGN 374
           MALG+ +            LG V  T S  RKRIL+ +  E  S  S+  +P+K+R  G 
Sbjct: 1   MALGRRHGSQMKGGDEELGLGFVPVTRSLSRKRILVSSNTESSSPSSVLRTPLKRRC-GE 59

Query: 375 NVGP--ERSLLEALPEDILIRVLCGVEHDDLKRLFHVSKPIREAAMVAKKLHFAYSTPKK 548
            V    E+S+LEA+P+DILIR+LCGV+HDDLK+LFHVS  IR+A ++AKK HFA+STP K
Sbjct: 60  MVEEKAEKSMLEAMPQDILIRILCGVDHDDLKQLFHVSNTIRDATLIAKKSHFAFSTPSK 119

Query: 549 VPAFRSAIDP-SSLEVDEIEAPNAPRQSRAGRSRLNRKKLADLSVALFSDDME 704
           V  FRS +DP  S   D+++ P+AP+QSR  RSRL  ++L+ +++ALFS D E
Sbjct: 120 VQTFRSPLDPEESSGFDDLQTPDAPKQSRHFRSRLRGRRLSGIAIALFSSDEE 172


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