BLASTX nr result

ID: Atractylodes22_contig00024551 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00024551
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN04852.1| RNA-directed DNA polymerase (Reverse transcriptas...   128   6e-28
ref|XP_003526344.1| PREDICTED: uncharacterized protein LOC100799...   127   9e-28
gb|AER13156.1| putative retrotransposon [Phaseolus vulgaris]          125   3e-27
gb|ABN05720.1| RNA-directed DNA polymerase (Reverse transcriptas...   125   3e-27
ref|XP_003530391.1| PREDICTED: uncharacterized protein LOC100804...   124   6e-27

>gb|ABN04852.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 469

 Score =  128 bits (321), Expect = 6e-28
 Identities = 67/142 (47%), Positives = 92/142 (64%), Gaps = 1/142 (0%)
 Frame = +1

Query: 16  WDYLDLILAKMGFATSWRG*ILGCLEDSMGSVLVNGSPTKEFCIRRGLRQEDHLSHFLFI 195
           W YLD ++ KMGF T WR  I  C+  +  SVLVNGSP  EF +RRGLRQ D LS FLF+
Sbjct: 71  WSYLDDVMLKMGFPTLWRKWIKECIGTATTSVLVNGSPIDEFSLRRGLRQGDRLSPFLFL 130

Query: 196 LAMKGLHVIIQDAISKNIFRGASIG-NDRYPLSHLFYADDAIFLGEWSLSNAQNIIRILR 372
           LA +G HV+++     ++F G ++G ND+  +SHL +ADD + LG+ S +N + +  +L 
Sbjct: 131 LAAEGFHVLMKSMTDIDLFHGYTVGRNDQVSVSHLQFADDTLILGDKSWANIRAMREVLL 190

Query: 373 CFHLISGLKINLYKSKLFGVGV 438
            F  +SGLK+N  KS L  V V
Sbjct: 191 LFQDLSGLKVNFTKSLLVRVNV 212


>ref|XP_003526344.1| PREDICTED: uncharacterized protein LOC100799415 [Glycine max]
          Length = 3081

 Score =  127 bits (319), Expect = 9e-28
 Identities = 70/144 (48%), Positives = 91/144 (63%)
 Frame = +1

Query: 4    DCLRWDYLDLILAKMGFATSWRG*ILGCLEDSMGSVLVNGSPTKEFCIRRGLRQEDHLSH 183
            D + WDYL  +L +MGF + W   I GCL+ +  SVLVNGSPT EF  +RGLRQ D L+ 
Sbjct: 1961 DSVSWDYLLHMLRRMGFCSKWIQWIHGCLKSASISVLVNGSPTSEFSPQRGLRQGDPLAP 2020

Query: 184  FLFILAMKGLHVIIQDAISKNIFRGASIGNDRYPLSHLFYADDAIFLGEWSLSNAQNIIR 363
             LF +  +GL  ++++A++KN F    +G D  P+S L YADD IF+GE ++ N   I  
Sbjct: 2021 LLFNITAEGLTGLMREAVNKNHFSEVLVGKDSVPVSILQYADDTIFVGEATMQNVVTIKS 2080

Query: 364  ILRCFHLISGLKINLYKSKLFGVG 435
            ILR F L SGLKIN  KS    VG
Sbjct: 2081 ILRGFELASGLKINFAKSCFGAVG 2104


>gb|AER13156.1| putative retrotransposon [Phaseolus vulgaris]
          Length = 1759

 Score =  125 bits (315), Expect = 3e-27
 Identities = 66/145 (45%), Positives = 92/145 (63%)
 Frame = +1

Query: 4    DCLRWDYLDLILAKMGFATSWRG*ILGCLEDSMGSVLVNGSPTKEFCIRRGLRQEDHLSH 183
            D +RWD+L  +L +MGF   W   I GCLE ++ S+LVNGS T+EF   RGLRQ D L+H
Sbjct: 1076 DSVRWDFLYDMLHRMGFHNVWISWIRGCLESAIVSLLVNGSTTEEFKPSRGLRQGDPLAH 1135

Query: 184  FLFILAMKGLHVIIQDAISKNIFRGASIGNDRYPLSHLFYADDAIFLGEWSLSNAQNIIR 363
            FLFI+  +GL  +++ A+  N+  G  IG     +  L +ADD +FL E ++ N   +  
Sbjct: 1136 FLFIVVAEGLAGLVRQALKANMLTGLKIGRQEVEMCILQFADDTLFLCEDTIDNVVTLKA 1195

Query: 364  ILRCFHLISGLKINLYKSKLFGVGV 438
            ILR F L SGL+IN +KS+L G+ V
Sbjct: 1196 ILRGFELASGLRINFHKSRLAGINV 1220


>gb|ABN05720.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 391

 Score =  125 bits (315), Expect = 3e-27
 Identities = 68/149 (45%), Positives = 95/149 (63%), Gaps = 1/149 (0%)
 Frame = +1

Query: 37  LAKMGFATSWRG*ILGCLEDSMGSVLVNGSPTKEFCIRRGLRQEDHLSHFLFILAMKGLH 216
           +AKMGF T WR  I  C+  +  SVLVNGSPT EF + RGL Q D LS FLF+LA +GLH
Sbjct: 1   MAKMGFPTLWRKWIKECITTATASVLVNGSPTDEFPLGRGLLQGDPLSPFLFLLAAEGLH 60

Query: 217 VIIQDAISKNIFRGASIGN-DRYPLSHLFYADDAIFLGEWSLSNAQNIIRILRCFHLISG 393
           V+++  +  ++FRG  +G+ +   +SHL +ADD + LGE S +N + +  +L  F  +SG
Sbjct: 61  VMMKAMVDASLFRGYRVGSGNEVVVSHLQFADDTLLLGEKSWANVRALRTVLILFEAVSG 120

Query: 394 LKINLYKSKLFGVGVGPADIDRMAYCVGC 480
           LKIN +KS L GV V  + +   A  + C
Sbjct: 121 LKINFHKSLLVGVNVADSWLTEAASLLNC 149


>ref|XP_003530391.1| PREDICTED: uncharacterized protein LOC100804594 [Glycine max]
          Length = 4413

 Score =  124 bits (312), Expect = 6e-27
 Identities = 65/159 (40%), Positives = 96/159 (60%)
 Frame = +1

Query: 4    DCLRWDYLDLILAKMGFATSWRG*ILGCLEDSMGSVLVNGSPTKEFCIRRGLRQEDHLSH 183
            D + W +LD +L ++GF   WR  I  CL+ +  SVL+NGSPTKEF   RGLRQ D L+ 
Sbjct: 1201 DSVSWSFLDYMLKRLGFCLKWRNWISVCLKSATISVLINGSPTKEFVPSRGLRQGDPLAP 1260

Query: 184  FLFILAMKGLHVIIQDAISKNIFRGASIGNDRYPLSHLFYADDAIFLGEWSLSNAQNIIR 363
             LF +  +GL  ++++A++++++R   +G    P++ L YADD +F+GE    N   +  
Sbjct: 1261 LLFNIVAEGLTGMMREALNRDLYRSFLVGKQNLPINILQYADDTVFVGEALWENVVVLKS 1320

Query: 364  ILRCFHLISGLKINLYKSKLFGVGVGPADIDRMAYCVGC 480
            +LR F + SGLKIN  KS+   VGV P  I   A  + C
Sbjct: 1321 LLRGFEMASGLKINFAKSQFGVVGVQPNWIQEAALFLNC 1359



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/53 (52%), Positives = 34/53 (64%)
 Frame = +1

Query: 4    DCLRWDYLDLILAKMGFATSWRG*ILGCLEDSMGSVLVNGSPTKEFCIRRGLR 162
            D + W +LD +L ++GF   WR  I  CL  +  SVLVNGSPTKEF   RGLR
Sbjct: 2850 DLVSWSFLDYMLMRLGFCLKWRKWISVCLHSATISVLVNGSPTKEFVPSRGLR 2902


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