BLASTX nr result

ID: Atractylodes22_contig00024520 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00024520
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3-like [Vit...    50   8e-06
emb|CBI34953.3| unnamed protein product [Vitis vinifera]               50   8e-06

>ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3-like [Vitis vinifera]
          Length = 1513

 Score = 50.1 bits (118), Expect(2) = 8e-06
 Identities = 23/35 (65%), Positives = 28/35 (80%)
 Frame = -2

Query: 159  FNSQMRNVSKNWYIPSTFPSGAVISVYASLQVDRA 55
            F  + RNVSKNW+IPS+FPS  VIS YAS QVD++
Sbjct: 1028 FMDKHRNVSKNWHIPSSFPSETVISAYASPQVDQS 1062



 Score = 24.3 bits (51), Expect(2) = 8e-06
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = -3

Query: 62   TEPFS*GMPHLFVFLK 15
            TEPFS G P LFV  K
Sbjct: 1063 TEPFSWGKPDLFVLRK 1078


>emb|CBI34953.3| unnamed protein product [Vitis vinifera]
          Length = 1449

 Score = 50.1 bits (118), Expect(2) = 8e-06
 Identities = 23/35 (65%), Positives = 28/35 (80%)
 Frame = -2

Query: 159  FNSQMRNVSKNWYIPSTFPSGAVISVYASLQVDRA 55
            F  + RNVSKNW+IPS+FPS  VIS YAS QVD++
Sbjct: 964  FMDKHRNVSKNWHIPSSFPSETVISAYASPQVDQS 998



 Score = 24.3 bits (51), Expect(2) = 8e-06
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = -3

Query: 62   TEPFS*GMPHLFVFLK 15
            TEPFS G P LFV  K
Sbjct: 999  TEPFSWGKPDLFVLRK 1014


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