BLASTX nr result

ID: Atractylodes22_contig00024475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00024475
         (676 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268896.2| PREDICTED: E3 ubiquitin-protein ligase UPL1-...   368   e-100
ref|XP_002522774.1| E3 ubiquitin protein ligase upl2, putative [...   352   5e-95
ref|XP_003531107.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-...   347   1e-93
ref|XP_002298873.1| predicted protein [Populus trichocarpa] gi|2...   342   5e-92
ref|XP_002316781.1| predicted protein [Populus trichocarpa] gi|2...   340   2e-91

>ref|XP_002268896.2| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Vitis vinifera]
          Length = 4116

 Score =  368 bits (944), Expect = e-100
 Identities = 183/225 (81%), Positives = 201/225 (89%), Gaps = 1/225 (0%)
 Frame = +3

Query: 3    NLNKLASTLRSFFIALVKGFTSPNRRRGETGSLSAASKSIGTALAKVFLEALSFPGYTTS 182
            NLNKLASTLRSFF ALVKGFTSPNRRR ++G+LS+ASKS+GTALAKVFLEALSF GY++S
Sbjct: 1391 NLNKLASTLRSFFTALVKGFTSPNRRRADSGTLSSASKSLGTALAKVFLEALSFSGYSSS 1450

Query: 183  AGLDTSLSLKCRYLGKVVDHIAALTFDNRRRTCYTVMINNFYVQGTFKELLNTFEATSQL 362
             GLD SLS+KCRYLGKVVD IA LTFD RRRTCYT M+NNFYV GTFKELL TFEATSQL
Sbjct: 1451 NGLDLSLSVKCRYLGKVVDDIAVLTFDGRRRTCYTAMVNNFYVHGTFKELLTTFEATSQL 1510

Query: 363  LWTLPYSASTSGIDHEK-SEGSKLSHSSWLLNTLESYCHVLEFFVNSNFLLTPASASQVH 539
            LWTLPYS  T GID+EK  EGSKLSHSSWLL+TL+SYC  LE+F+NS  LL+P SASQ  
Sbjct: 1511 LWTLPYSVPTQGIDNEKVGEGSKLSHSSWLLDTLQSYCRALEYFINSALLLSPNSASQAQ 1570

Query: 540  LVVQPVAVGLSIGLFPVPRDPKVFVRMLQSQVLDVILPVWNHPMF 674
            L+VQPVAVGLSIGLFPVPRDP+ FVRMLQSQVLDV+LPVWNHPMF
Sbjct: 1571 LLVQPVAVGLSIGLFPVPRDPEAFVRMLQSQVLDVMLPVWNHPMF 1615


>ref|XP_002522774.1| E3 ubiquitin protein ligase upl2, putative [Ricinus communis]
            gi|223538012|gb|EEF39625.1| E3 ubiquitin protein ligase
            upl2, putative [Ricinus communis]
          Length = 3691

 Score =  352 bits (902), Expect = 5e-95
 Identities = 174/225 (77%), Positives = 200/225 (88%), Gaps = 1/225 (0%)
 Frame = +3

Query: 3    NLNKLASTLRSFFIALVKGFTSPNRRRGETGSLSAASKSIGTALAKVFLEALSFPGYTTS 182
            NLNKLAST RSFF ALVKGFTSPNRRR + GSLS+ASK++GTALAK+FLEAL+F GY+TS
Sbjct: 1029 NLNKLASTSRSFFTALVKGFTSPNRRRADVGSLSSASKTLGTALAKIFLEALNFSGYSTS 1088

Query: 183  AGLDTSLSLKCRYLGKVVDHIAALTFDNRRRTCYTVMINNFYVQGTFKELLNTFEATSQL 362
             GLD SLS+KCRYLGK++D +AALTFD+RRRTCYT M+NNFYV G FKELL TFEATSQL
Sbjct: 1089 -GLDMSLSVKCRYLGKIMDDMAALTFDSRRRTCYTAMVNNFYVHGAFKELLTTFEATSQL 1147

Query: 363  LWTLPYSASTSGIDHEKS-EGSKLSHSSWLLNTLESYCHVLEFFVNSNFLLTPASASQVH 539
            LWTLP+   T   D+EK+ EG+KLSHS+WLL+TL+SYC VLE+FVNS  L++P SASQ  
Sbjct: 1148 LWTLPHPFPTPSADNEKAVEGNKLSHSTWLLDTLQSYCRVLEYFVNSTSLISPTSASQAQ 1207

Query: 540  LVVQPVAVGLSIGLFPVPRDPKVFVRMLQSQVLDVILPVWNHPMF 674
            L+VQPVAVGLSIGLFPVPRDP+VFVRMLQSQVLDVILP+WNHPMF
Sbjct: 1208 LLVQPVAVGLSIGLFPVPRDPEVFVRMLQSQVLDVILPIWNHPMF 1252


>ref|XP_003531107.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Glycine max]
          Length = 3713

 Score =  347 bits (890), Expect = 1e-93
 Identities = 173/224 (77%), Positives = 197/224 (87%), Gaps = 1/224 (0%)
 Frame = +3

Query: 6    LNKLASTLRSFFIALVKGFTSPNRRRGETGSLSAASKSIGTALAKVFLEALSFPGYTTSA 185
            LNKLASTLRSFF ALVKGFTSPNRRR ++GSLS+ASK++G  LA  F EALSF G++T A
Sbjct: 1018 LNKLASTLRSFFTALVKGFTSPNRRRADSGSLSSASKTLGAVLATNFFEALSFSGHSTYA 1077

Query: 186  GLDTSLSLKCRYLGKVVDHIAALTFDNRRRTCYTVMINNFYVQGTFKELLNTFEATSQLL 365
            GL+ SLS+KCRYLGKVVD +AALTFD+RRR+CYT M+NNFYV GTFKELL TFEATSQLL
Sbjct: 1078 GLEMSLSVKCRYLGKVVDDMAALTFDSRRRSCYTAMVNNFYVHGTFKELLTTFEATSQLL 1137

Query: 366  WTLPYSASTSGID-HEKSEGSKLSHSSWLLNTLESYCHVLEFFVNSNFLLTPASASQVHL 542
            WTLPYS   S ID  +K EG KLSH++WLL+TL+SYC +LE+FVNS+FLL+  SASQ  L
Sbjct: 1138 WTLPYSLPLSDIDVGKKGEGGKLSHNTWLLDTLQSYCRLLEYFVNSSFLLSATSASQTEL 1197

Query: 543  VVQPVAVGLSIGLFPVPRDPKVFVRMLQSQVLDVILPVWNHPMF 674
            +VQPVAVGLSIGLFPVPRDP+VFVRMLQSQVLDVILPVWNHPMF
Sbjct: 1198 LVQPVAVGLSIGLFPVPRDPEVFVRMLQSQVLDVILPVWNHPMF 1241


>ref|XP_002298873.1| predicted protein [Populus trichocarpa] gi|222846131|gb|EEE83678.1|
            predicted protein [Populus trichocarpa]
          Length = 3728

 Score =  342 bits (876), Expect = 5e-92
 Identities = 171/224 (76%), Positives = 194/224 (86%), Gaps = 1/224 (0%)
 Frame = +3

Query: 6    LNKLASTLRSFFIALVKGFTSPNRRRGETGSLSAASKSIGTALAKVFLEALSFPGYTTSA 185
            LNKLAS LR+FF ALVKGFT PNRRR + GSLSAASK++GT LAK+FLEALSF GY+T+ 
Sbjct: 1026 LNKLASILRTFFSALVKGFTLPNRRRADVGSLSAASKTLGTTLAKIFLEALSFSGYSTT- 1084

Query: 186  GLDTSLSLKCRYLGKVVDHIAALTFDNRRRTCYTVMINNFYVQGTFKELLNTFEATSQLL 365
            GLDTSLS+KCRYLGKVVD +AALTFD+RRRTCY  M+NNFYV GTF+ELL TFEATSQLL
Sbjct: 1085 GLDTSLSVKCRYLGKVVDDMAALTFDSRRRTCYAAMVNNFYVHGTFRELLTTFEATSQLL 1144

Query: 366  WTLPYSASTSGIDHEKS-EGSKLSHSSWLLNTLESYCHVLEFFVNSNFLLTPASASQVHL 542
            WTLPY   T  +D EK+ EG+ LSHS+WLL+TL SYC  LE+FVNS+ LL+  SASQ  L
Sbjct: 1145 WTLPYPFPTPSVDQEKAGEGNNLSHSTWLLDTLHSYCRALEYFVNSSLLLSSTSASQAQL 1204

Query: 543  VVQPVAVGLSIGLFPVPRDPKVFVRMLQSQVLDVILPVWNHPMF 674
            +VQPVAVGLSIGLFPVP+DP+VFVRMLQSQVLDVILPVWNH MF
Sbjct: 1205 LVQPVAVGLSIGLFPVPKDPEVFVRMLQSQVLDVILPVWNHQMF 1248


>ref|XP_002316781.1| predicted protein [Populus trichocarpa] gi|222859846|gb|EEE97393.1|
            predicted protein [Populus trichocarpa]
          Length = 3663

 Score =  340 bits (871), Expect = 2e-91
 Identities = 171/224 (76%), Positives = 191/224 (85%), Gaps = 1/224 (0%)
 Frame = +3

Query: 6    LNKLASTLRSFFIALVKGFTSPNRRRGETGSLSAASKSIGTALAKVFLEALSFPGYTTSA 185
            LNKLAS LRSFF ALVKGFTSPNRRR + G LSA SK++GT LAK++LEALSF GY T A
Sbjct: 1023 LNKLASLLRSFFSALVKGFTSPNRRRADVGLLSAVSKTLGTTLAKIYLEALSFSGYFT-A 1081

Query: 186  GLDTSLSLKCRYLGKVVDHIAALTFDNRRRTCYTVMINNFYVQGTFKELLNTFEATSQLL 365
            GLDTSLS+KCRYLGKVVD +AALTFD+RRRTCY  M+NNFYV GTFKELL TFEATSQLL
Sbjct: 1082 GLDTSLSVKCRYLGKVVDDMAALTFDSRRRTCYASMVNNFYVHGTFKELLTTFEATSQLL 1141

Query: 366  WTLPYSASTSGIDHEKS-EGSKLSHSSWLLNTLESYCHVLEFFVNSNFLLTPASASQVHL 542
            WTLPY      +DHEK+ EG+ LSHS+WLL+TL SYC VLE+FVNS  LL+  S SQV L
Sbjct: 1142 WTLPYPFPCPSVDHEKAGEGNNLSHSTWLLDTLHSYCRVLEYFVNSTLLLSSTSGSQVQL 1201

Query: 543  VVQPVAVGLSIGLFPVPRDPKVFVRMLQSQVLDVILPVWNHPMF 674
            +VQPVA GLSIGLFPVP+DP+VFVRMLQSQVLDV+L VWNHPMF
Sbjct: 1202 LVQPVAAGLSIGLFPVPKDPEVFVRMLQSQVLDVMLSVWNHPMF 1245


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