BLASTX nr result

ID: Atractylodes22_contig00024468 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00024468
         (1099 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283851.1| PREDICTED: UPF0082 protein At2g25830 [Vitis ...   336   5e-90
ref|XP_002516504.1| conserved hypothetical protein [Ricinus comm...   330   5e-88
ref|XP_002308602.1| predicted protein [Populus trichocarpa] gi|2...   329   8e-88
ref|XP_002880709.1| hypothetical protein ARALYDRAFT_320374 [Arab...   317   3e-84
ref|NP_565610.1| YebC-related protein [Arabidopsis thaliana] gi|...   312   1e-82

>ref|XP_002283851.1| PREDICTED: UPF0082 protein At2g25830 [Vitis vinifera]
            gi|296081846|emb|CBI20851.3| unnamed protein product
            [Vitis vinifera]
          Length = 319

 Score =  336 bits (862), Expect = 5e-90
 Identities = 186/319 (58%), Positives = 218/319 (68%)
 Frame = +2

Query: 101  SSMKTFGALLYRFSTGVPLKSPISFSIQGTVRLNKNXXXXXXXXPCAKWVTPIEFQTVNS 280
            SS++ FGALL+RFS GVP K   S +++ T  L KN          + W++  E +    
Sbjct: 5    SSIRAFGALLHRFSNGVPFKHSNSVALR-TGFLPKNPSSFSSK---SSWLSLYEVKLSVR 60

Query: 281  VRKIWTRGPLCMGRRSCKIAGRKEAQDAKKMKFYAKVGKQVVSTVKKGGPNPVSNTTXXX 460
            VR I T  P+CMGRRS KIAGRK AQDAKK K Y+K+GK+VVS VK+ GPNP SNT    
Sbjct: 61   VRTIQTFSPVCMGRRSSKIAGRKGAQDAKKAKLYSKIGKEVVSAVKRDGPNPKSNTILAA 120

Query: 461  XXXXXXXXDVPKEILERNIKRASDKGQEAXXXXXXXXXXXXXXXXXXXXSTDKINRSIAA 640
                    DVPKEI+ERNIKRAS+KGQEA                     TDKINRS+AA
Sbjct: 121  VLEKAKELDVPKEIVERNIKRASEKGQEAYIEKFYEVYGFGGVSMIIEVLTDKINRSVAA 180

Query: 641  VREVVKDCGGKMADPGSIMFKFRRARVVNVKVSDADRXXXXXXXXXXXXXXVIEPFMDED 820
            VREV+KDCGGKMADPGS+MFKFRRARVVNVK S+AD+              VIEP + ED
Sbjct: 181  VREVMKDCGGKMADPGSVMFKFRRARVVNVKASEADKDQLLTIALDTGAEDVIEPPVYED 240

Query: 821  DTEEDKSERYYKIVSSSENYVEILSKLREEGISFVPDNGSELLPLTPIEVDDEAMELNRE 1000
            D EED+SE YYKIV+S+ENY  IL KLREEGI+F  DNG E+LP+T IEVDDEAM+LN+E
Sbjct: 241  DAEEDRSESYYKIVTSAENYSAILEKLREEGINFETDNGFEMLPITTIEVDDEAMDLNKE 300

Query: 1001 LMSNLLDLDDVDAVYTDQK 1057
            LMS LL+LDDVDAVY DQK
Sbjct: 301  LMSKLLELDDVDAVYMDQK 319


>ref|XP_002516504.1| conserved hypothetical protein [Ricinus communis]
            gi|223544324|gb|EEF45845.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 311

 Score =  330 bits (845), Expect = 5e-88
 Identities = 169/260 (65%), Positives = 196/260 (75%)
 Frame = +2

Query: 278  SVRKIWTRGPLCMGRRSCKIAGRKEAQDAKKMKFYAKVGKQVVSTVKKGGPNPVSNTTXX 457
            ++R+IWT  P+CMGRRSCKIAGRK AQDAKK K Y+++GK+VVS VKKGGP+P+SNT   
Sbjct: 52   NLRQIWTYPPVCMGRRSCKIAGRKGAQDAKKAKLYSRIGKEVVSAVKKGGPSPISNTVLA 111

Query: 458  XXXXXXXXXDVPKEILERNIKRASDKGQEAXXXXXXXXXXXXXXXXXXXXSTDKINRSIA 637
                     DVPK+ILERNIKRASDKGQEA                     TDKINRS+A
Sbjct: 112  ALLEKAKELDVPKDILERNIKRASDKGQEAYIEKIYEVYGFGGVSIVVEVLTDKINRSVA 171

Query: 638  AVREVVKDCGGKMADPGSIMFKFRRARVVNVKVSDADRXXXXXXXXXXXXXXVIEPFMDE 817
            AVREVVKD GGKMADPGS+MFKF+R RVVN+KV++AD+              VIEP + E
Sbjct: 172  AVREVVKDYGGKMADPGSVMFKFKRVRVVNIKVTEADKDQLLAIALDAGAEDVIEPPIYE 231

Query: 818  DDTEEDKSERYYKIVSSSENYVEILSKLREEGISFVPDNGSELLPLTPIEVDDEAMELNR 997
            DD +EDKSE YYK+VSSSENY+EILSKLREEGI F  DNGSELLP+T IEVDDEAM+LN+
Sbjct: 232  DDADEDKSESYYKVVSSSENYMEILSKLREEGIDFETDNGSELLPITTIEVDDEAMDLNK 291

Query: 998  ELMSNLLDLDDVDAVYTDQK 1057
            EL+S LL+LDDVDAVYTDQK
Sbjct: 292  ELISKLLELDDVDAVYTDQK 311


>ref|XP_002308602.1| predicted protein [Populus trichocarpa] gi|222854578|gb|EEE92125.1|
            predicted protein [Populus trichocarpa]
          Length = 292

 Score =  329 bits (843), Expect = 8e-88
 Identities = 171/262 (65%), Positives = 192/262 (73%)
 Frame = +2

Query: 272  VNSVRKIWTRGPLCMGRRSCKIAGRKEAQDAKKMKFYAKVGKQVVSTVKKGGPNPVSNTT 451
            V +VRKIWT  P+CMGRRSCKIAGRK AQDAKK K Y ++GK+VVS VKKGGPNP SNT 
Sbjct: 31   VKNVRKIWTFPPVCMGRRSCKIAGRKGAQDAKKAKLYCRIGKEVVSAVKKGGPNPESNTA 90

Query: 452  XXXXXXXXXXXDVPKEILERNIKRASDKGQEAXXXXXXXXXXXXXXXXXXXXSTDKINRS 631
                       DVPKEILERNIKRAS+KGQEA                    STDKI RS
Sbjct: 91   LAALIDKFKELDVPKEILERNIKRASEKGQEAFIEKIYEVYGLGGVSIVVEVSTDKIKRS 150

Query: 632  IAAVREVVKDCGGKMADPGSIMFKFRRARVVNVKVSDADRXXXXXXXXXXXXXXVIEPFM 811
            +A +REVVKD GGKMADPGS++FKFRRARVVN+KV+DADR              VIEP  
Sbjct: 151  VAVIREVVKDYGGKMADPGSVLFKFRRARVVNIKVTDADRDQLLGIALDAGAEDVIEPPT 210

Query: 812  DEDDTEEDKSERYYKIVSSSENYVEILSKLREEGISFVPDNGSELLPLTPIEVDDEAMEL 991
             EDD++ED+SE YYK+VS +ENY  ILSKLR EGISF  DNGSELLP+TPIEVDDEA+EL
Sbjct: 211  YEDDSDEDRSESYYKVVSPAENYAAILSKLRNEGISFETDNGSELLPITPIEVDDEAVEL 270

Query: 992  NRELMSNLLDLDDVDAVYTDQK 1057
            N+ LMS LL+LDDVDAVYTDQK
Sbjct: 271  NKVLMSKLLELDDVDAVYTDQK 292


>ref|XP_002880709.1| hypothetical protein ARALYDRAFT_320374 [Arabidopsis lyrata subsp.
            lyrata] gi|297326548|gb|EFH56968.1| hypothetical protein
            ARALYDRAFT_320374 [Arabidopsis lyrata subsp. lyrata]
          Length = 327

 Score =  317 bits (813), Expect = 3e-84
 Identities = 174/319 (54%), Positives = 210/319 (65%), Gaps = 7/319 (2%)
 Frame = +2

Query: 122  ALLYRFSTGVPLKSPISFSIQGTVRLNKNXXXXXXXXP--CAKWVTPIEFQTVNSVRKIW 295
            A+L+RFS GV  +S ++ +    + +  +        P   + +    +    N  RK+ 
Sbjct: 9    AILHRFSNGVSSRSILNSTKHRLLTMTNSLSSLSSISPHTTSHFTASQQSDDENCFRKLQ 68

Query: 296  TRG-----PLCMGRRSCKIAGRKEAQDAKKMKFYAKVGKQVVSTVKKGGPNPVSNTTXXX 460
             R      PLCMGRRS KIAGRK AQD+KK K Y ++GK+VVS VKKGGPNPVSNTT   
Sbjct: 69   VRKISISTPLCMGRRSSKIAGRKGAQDSKKAKLYCRIGKEVVSAVKKGGPNPVSNTTLAT 128

Query: 461  XXXXXXXXDVPKEILERNIKRASDKGQEAXXXXXXXXXXXXXXXXXXXXSTDKINRSIAA 640
                    DVPK+I+ERNIKRAS+KGQEA                     TDKINRS+AA
Sbjct: 129  ILDKAKELDVPKDIVERNIKRASEKGQEAFIEKIYEVYGYGGVSMVVEVLTDKINRSVAA 188

Query: 641  VREVVKDCGGKMADPGSIMFKFRRARVVNVKVSDADRXXXXXXXXXXXXXXVIEPFMDED 820
            +R VVKD GGKMAD GS+MFKFRR RVVN+KV++AD+              VIEP   ED
Sbjct: 189  IRSVVKDYGGKMADSGSVMFKFRRVRVVNIKVTEADKDQLLNIALDAGAEDVIEPPTYED 248

Query: 821  DTEEDKSERYYKIVSSSENYVEILSKLREEGISFVPDNGSELLPLTPIEVDDEAMELNRE 1000
            DT+ED+ ERYYKIV+SSENY  ILSKLR+EG++F PDNGSELLPLT +EVDDEAMELN+E
Sbjct: 249  DTDEDREERYYKIVTSSENYSTILSKLRDEGVNFEPDNGSELLPLTTVEVDDEAMELNKE 308

Query: 1001 LMSNLLDLDDVDAVYTDQK 1057
            LM  LL+LDDVDAVY DQK
Sbjct: 309  LMQKLLELDDVDAVYIDQK 327


>ref|NP_565610.1| YebC-related protein [Arabidopsis thaliana]
            gi|22096384|sp|O82314.2|U082_ARATH RecName: Full=Probable
            transcriptional regulatory protein At2g25830
            gi|20197365|gb|AAC42247.2| expressed protein [Arabidopsis
            thaliana] gi|330252663|gb|AEC07757.1| YebC-related
            protein [Arabidopsis thaliana]
          Length = 331

 Score =  312 bits (799), Expect = 1e-82
 Identities = 162/259 (62%), Positives = 188/259 (72%)
 Frame = +2

Query: 281  VRKIWTRGPLCMGRRSCKIAGRKEAQDAKKMKFYAKVGKQVVSTVKKGGPNPVSNTTXXX 460
            +RKI    PLCMGRRS KIAGRK AQD+KK K Y ++GK+VVS VKKGGPNPVSNTT   
Sbjct: 73   LRKISISTPLCMGRRSSKIAGRKGAQDSKKAKLYCRIGKEVVSAVKKGGPNPVSNTTLAT 132

Query: 461  XXXXXXXXDVPKEILERNIKRASDKGQEAXXXXXXXXXXXXXXXXXXXXSTDKINRSIAA 640
                    DVPK+I+ERNIKRAS+KGQEA                     TDKINRS+AA
Sbjct: 133  ILDKAKELDVPKDIVERNIKRASEKGQEAFIEKIYEVYGYGGVSMVVEVLTDKINRSVAA 192

Query: 641  VREVVKDCGGKMADPGSIMFKFRRARVVNVKVSDADRXXXXXXXXXXXXXXVIEPFMDED 820
            +R VVKD GGKMAD GS+MFKF+R RVVN+KV++AD+              VIEP   ED
Sbjct: 193  IRSVVKDYGGKMADSGSVMFKFKRVRVVNIKVTEADKDQLLIIALDAGAEDVIEPPTYED 252

Query: 821  DTEEDKSERYYKIVSSSENYVEILSKLREEGISFVPDNGSELLPLTPIEVDDEAMELNRE 1000
            DT+ED+ ERYYKIV+S+ENY  ILSKLR+EG++F PDNGSELLPLT +EVDDEAMELN+E
Sbjct: 253  DTDEDREERYYKIVTSNENYSTILSKLRDEGVNFEPDNGSELLPLTTVEVDDEAMELNKE 312

Query: 1001 LMSNLLDLDDVDAVYTDQK 1057
            LM  LL+LDDVDAVY DQK
Sbjct: 313  LMQKLLELDDVDAVYIDQK 331


Top