BLASTX nr result

ID: Atractylodes22_contig00024393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00024393
         (847 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002672124.1| conventional actin [Naegleria gruberi] gi|28...    64   6e-08
ref|XP_003510075.1| PREDICTED: actin, gamma-enteric smooth muscl...    63   7e-08
ref|XP_004158496.1| PREDICTED: actin-related protein 2-like [Cuc...    63   9e-08
ref|XP_004138627.1| PREDICTED: actin-related protein 2-like [Cuc...    63   9e-08
gb|EKC38060.1| Actin [Crassostrea gigas]                               63   9e-08

>ref|XP_002672124.1| conventional actin [Naegleria gruberi] gi|284085698|gb|EFC39380.1|
           conventional actin [Naegleria gruberi]
          Length = 374

 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
 Frame = +3

Query: 630 EHMPTIVCDNGSSLMKVGFADENNPTAVFHIVVGRPNDRRLTF-THLSNAYVGRQALSCR 806
           EH P ++ DNGS + K GFA E+ P AVF  ++GRP  R +       +AYVG +A+S +
Sbjct: 3   EHRPLVI-DNGSGMCKAGFAGEDAPRAVFPSLIGRPKQRSIMVGVRYKDAYVGDEAMSKK 61

Query: 807 STLALTYPIHRG 842
            T+ L YPI  G
Sbjct: 62  GTITLKYPIEHG 73


>ref|XP_003510075.1| PREDICTED: actin, gamma-enteric smooth muscle-like isoform 2
           [Cricetulus griseus]
          Length = 375

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 33/71 (46%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
 Frame = +3

Query: 633 HMPTIVCDNGSSLMKVGFADENNPTAVFHIVVGRPNDRR-LTFTHLSNAYVGRQALSCRS 809
           H P +VCDNGS L K GFA ++ P AVF  +VGRP  +  +      ++YVG +A S R 
Sbjct: 4   HSPPLVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 63

Query: 810 TLALTYPIHRG 842
            L L YPI  G
Sbjct: 64  ILTLKYPIEHG 74


>ref|XP_004158496.1| PREDICTED: actin-related protein 2-like [Cucumis sativus]
          Length = 390

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 32/75 (42%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
 Frame = +3

Query: 627 MEHMPTIVCDNGSSLMKVGFADENNPTAVFHIVVGRP---NDRRLTFTHLSNAYVGRQAL 797
           M++   +VCDNG+  +K GFA EN PT+VF  VVGRP    +  L    L +  VG    
Sbjct: 1   MDNRNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLIEQELKDIVVGESCA 60

Query: 798 SCRSTLALTYPIHRG 842
             R  L +TYP+H G
Sbjct: 61  DLRHQLDITYPVHNG 75


>ref|XP_004138627.1| PREDICTED: actin-related protein 2-like [Cucumis sativus]
          Length = 389

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 32/75 (42%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
 Frame = +3

Query: 627 MEHMPTIVCDNGSSLMKVGFADENNPTAVFHIVVGRP---NDRRLTFTHLSNAYVGRQAL 797
           M++   +VCDNG+  +K GFA EN PT+VF  VVGRP    +  L    L +  VG    
Sbjct: 1   MDNRNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLIEQELKDIVVGESCA 60

Query: 798 SCRSTLALTYPIHRG 842
             R  L +TYP+H G
Sbjct: 61  DLRHQLDITYPVHNG 75


>gb|EKC38060.1| Actin [Crassostrea gigas]
          Length = 377

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
 Frame = +3

Query: 630 EHMPTIVCDNGSSLMKVGFADENNPTAVFHIVVGRPNDRRLTF-THLSNAYVGRQALSCR 806
           + +  +V DNGS + K GFA ++ P  VFH +VGRP    +T+     ++YVG +A S R
Sbjct: 5   DEVAALVIDNGSGMCKAGFAGDDAPRVVFHSIVGRPKHEDVTYVAEHKDSYVGDEAQSKR 64

Query: 807 STLALTYPIHRG 842
             L L YPI RG
Sbjct: 65  GRLTLQYPIERG 76


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