BLASTX nr result

ID: Atractylodes22_contig00024347 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00024347
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305338.1| predicted protein [Populus trichocarpa] gi|2...   224   6e-57
ref|XP_003547207.1| PREDICTED: uncharacterized mitochondrial pro...   221   4e-56
ref|XP_002519696.1| RNA binding protein, putative [Ricinus commu...   216   1e-54
ref|XP_002269568.1| PREDICTED: uncharacterized mitochondrial pro...   215   4e-54
ref|XP_004165625.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   210   9e-53

>ref|XP_002305338.1| predicted protein [Populus trichocarpa] gi|222848302|gb|EEE85849.1|
           predicted protein [Populus trichocarpa]
          Length = 623

 Score =  224 bits (571), Expect = 6e-57
 Identities = 110/177 (62%), Positives = 134/177 (75%), Gaps = 3/177 (1%)
 Frame = +1

Query: 1   LRTISTSDETPFQDSVVQEVLLMILEPVFEPRFSPKSHAFRPQRNAHTVIRTIRSNFAGY 180
           L  +  SD+  FQD VVQE+LLM+LEP+FE RFS KSHAFRP RNAHTVIRTIRSNFAGY
Sbjct: 111 LSAMMESDDPCFQDRVVQEMLLMVLEPIFEARFSRKSHAFRPGRNAHTVIRTIRSNFAGY 170

Query: 181 VWFLKGDLTLLFNNVDINLIMGFVEKGVKDQKVLGLIKSGLKG---LPKSGHSCXXXXXX 351
           +WFL+GDL+ + +++D +++MG VEK V+D+KVL LIK  LK    + + G+        
Sbjct: 171 LWFLRGDLSEILDDIDADVVMGCVEKVVRDKKVLNLIKKALKSPVRIREMGNYGEESRKK 230

Query: 352 XXXXXXXXXVLDENEAKPDPYWLRTFFDFAPEEAAKVPNYGYCGILSPLLANICLNE 522
                    +L+ENE KPDPYWLRTFFDFAPEEAAK+P YGYCGILSPLLAN+CLNE
Sbjct: 231 KKRKSTKKKILNENEPKPDPYWLRTFFDFAPEEAAKIPTYGYCGILSPLLANVCLNE 287


>ref|XP_003547207.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like
           [Glycine max]
          Length = 686

 Score =  221 bits (564), Expect = 4e-56
 Identities = 111/180 (61%), Positives = 131/180 (72%), Gaps = 7/180 (3%)
 Frame = +1

Query: 4   RTISTSDETPFQDSVVQEVLLMILEPVFEPRFSPKSHAFRPQRNAHTVIRTIRSNFAGYV 183
           R    S +  FQD VVQE+LLMILEPVFEPRFSPKSHAFRP RNAHTVIRTIRSNFAGY+
Sbjct: 147 RAAIQSGKPCFQDRVVQEILLMILEPVFEPRFSPKSHAFRPGRNAHTVIRTIRSNFAGYL 206

Query: 184 WFLKGDLTLLFNNVDINLIMGFVEKGVKDQKVLGLIKSGLKG-------LPKSGHSCXXX 342
           WFLKGDLT + + VD N++M  +EKG +D+K+LGLIKS L+G       + +   +    
Sbjct: 207 WFLKGDLTEILDRVDPNVVMRSLEKGTRDKKILGLIKSALEGENEKLRDVSRKEENVEEL 266

Query: 343 XXXXXXXXXXXXVLDENEAKPDPYWLRTFFDFAPEEAAKVPNYGYCGILSPLLANICLNE 522
                       +  ENE  PDPYWLRTFF FAPEEAAK+P+YG+CGILSPLLAN+CLNE
Sbjct: 267 RRLKKRRATKKRIWKENEPIPDPYWLRTFFSFAPEEAAKLPDYGHCGILSPLLANVCLNE 326


>ref|XP_002519696.1| RNA binding protein, putative [Ricinus communis]
           gi|223541113|gb|EEF42669.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 681

 Score =  216 bits (551), Expect = 1e-54
 Identities = 110/179 (61%), Positives = 128/179 (71%), Gaps = 5/179 (2%)
 Frame = +1

Query: 1   LRTISTSDETPFQDSVVQEVLLMILEPVFEPRFSPKSHAFRPQRNAHTVIRTIRSNFAGY 180
           L+ +  S++  FQD VVQEVLLM+LEP FE RFS KSHAFRP RNAHTVIRTIRSNFAGY
Sbjct: 141 LKAMVNSNDPCFQDRVVQEVLLMVLEPFFEARFSGKSHAFRPGRNAHTVIRTIRSNFAGY 200

Query: 181 VWFLKGDLTLLFNNVDINLIMGFVEKGVKDQKVLGLIKSGLKGLPKSGH-----SCXXXX 345
           +WFL+GDL+ +F  VD N ++  VEK VKD+KVL L+K  LK   ++             
Sbjct: 201 LWFLRGDLSEIFYAVDANFVLECVEKVVKDKKVLNLVKDALKSPMRNQELEKRSDRKELR 260

Query: 346 XXXXXXXXXXXVLDENEAKPDPYWLRTFFDFAPEEAAKVPNYGYCGILSPLLANICLNE 522
                      +L+ENE KPDPYWLRTFFDFAPEEA  +PNYGYCGILSPLLANICLNE
Sbjct: 261 KKKKKKATKKRILNENEPKPDPYWLRTFFDFAPEEAVNIPNYGYCGILSPLLANICLNE 319


>ref|XP_002269568.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like [Vitis
           vinifera]
          Length = 689

 Score =  215 bits (547), Expect = 4e-54
 Identities = 108/179 (60%), Positives = 135/179 (75%), Gaps = 5/179 (2%)
 Frame = +1

Query: 1   LRTISTSDETPFQDSVVQEVLLMILEPVFEPRFSPKSHAFRPQRNAHTVIRTIRSNFAGY 180
           +++I  S+   FQD VVQEVLL+ILEP+FE RFS KSHAFRP RNAHTVIRTIRSNFAGY
Sbjct: 149 IQSILESNAPCFQDRVVQEVLLLILEPIFEARFSSKSHAFRPGRNAHTVIRTIRSNFAGY 208

Query: 181 VWFLKGDLTLLFNNVDINLIMGFVEKGVKDQKVLGLIKSGLKGLPKS---GHSC--XXXX 345
           +WFL+GD++ +F  VD +++MG++EK VKD+KVLGLIK  L    ++   G  C      
Sbjct: 209 LWFLRGDVSEIFETVDTDVVMGYLEKYVKDKKVLGLIKLALGARVRNQAHGGDCDVTFGK 268

Query: 346 XXXXXXXXXXXVLDENEAKPDPYWLRTFFDFAPEEAAKVPNYGYCGILSPLLANICLNE 522
                      +L+ENE KPDP+WLR+FF FAPEEAAKVP+YG+CGILSPLLAN+CL+E
Sbjct: 269 KKKKKGPKKKKILNENEPKPDPFWLRSFFSFAPEEAAKVPSYGHCGILSPLLANVCLSE 327


>ref|XP_004165625.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized mitochondrial
           protein ymf11-like [Cucumis sativus]
          Length = 697

 Score =  210 bits (535), Expect = 9e-53
 Identities = 107/179 (59%), Positives = 131/179 (73%), Gaps = 5/179 (2%)
 Frame = +1

Query: 1   LRTISTSDETPFQDSVVQEVLLMILEPVFEPRFSPKSHAFRPQRNAHTVIRTIRSNFAGY 180
           LR +  SDE  FQD VVQEVLL +LEP FE RFS KSHAFRP RNAH+ IR IRSNFAGY
Sbjct: 165 LRAMLESDEPCFQDRVVQEVLLNVLEPXFEARFSLKSHAFRPGRNAHSFIRAIRSNFAGY 224

Query: 181 VWFLKGDLTLLFNNVDINLIMGFVEKGVKDQKVLGLIKSGLKGLPKS-----GHSCXXXX 345
           +WFLK DL+ + +++D N++MG +EK VKD+K+L L+KS L+   K+      +      
Sbjct: 225 LWFLKADLSEVLSHIDENVVMGSLEKAVKDKKILRLVKSALQSPRKTRPRVEDNEEMMKK 284

Query: 346 XXXXXXXXXXXVLDENEAKPDPYWLRTFFDFAPEEAAKVPNYGYCGILSPLLANICLNE 522
                      +L+ENE KPDPYWLRTFF+FAPEEAAKVP+YG+CGILSPLLANICL+E
Sbjct: 285 KKNKGAMKKKKILNENEPKPDPYWLRTFFNFAPEEAAKVPSYGHCGILSPLLANICLHE 343


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