BLASTX nr result

ID: Atractylodes22_contig00024344 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00024344
         (1171 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326106.1| predicted protein [Populus trichocarpa] gi|1...   256   6e-66
gb|AEV41137.1| D6-type cyclin [Populus x canadensis]                  251   2e-64
ref|XP_003526300.1| PREDICTED: putative cyclin-D6-1-like [Glycin...   249   1e-63
ref|NP_001242717.1| uncharacterized protein LOC100799951 [Glycin...   241   3e-61
ref|XP_003540877.1| PREDICTED: putative cyclin-D6-1-like [Glycin...   241   3e-61

>ref|XP_002326106.1| predicted protein [Populus trichocarpa] gi|159025735|emb|CAN88868.1|
            D6-type cyclin [Populus trichocarpa]
            gi|222862981|gb|EEF00488.1| predicted protein [Populus
            trichocarpa]
          Length = 324

 Score =  256 bits (655), Expect = 6e-66
 Identities = 153/320 (47%), Positives = 201/320 (62%), Gaps = 24/320 (7%)
 Frame = -2

Query: 1119 MEFDLENPLSK------DLQHSLFAMESDHLPFSN-----SDLDSDHHIRRQIIS-LIST 976
            M+F+LENPL+       D   SLF +ESDH+P  N      ++D D   RR+ IS ++  
Sbjct: 1    MDFNLENPLTNSHELHFDTTPSLFLIESDHMPSKNYLKTLKEIDFDVSFRREAISSVLRV 60

Query: 975  FCHKLHHPFVSYLAINYLHRFLASNSIPDEKPWILKLVAVSCVSLAFKMISPDSRLSDHV 796
             C+    P +SYLA+NYL RFL+S  IP  KPW+ KL+AV+CVSLA KM   +  ++D +
Sbjct: 61   SCN--FDPSLSYLAVNYLDRFLSSQGIPQPKPWVFKLLAVACVSLAAKMKEAEFYVTD-I 117

Query: 795  QKDGDLMFDFGIVERMEFVILGALQWRMRSITPFAFIGFFVSFFKLKATSLXXXXXXXXX 616
            Q DG  +FD   +++ME +ILGAL WRMRSITPF+FI FF+S FK K   L         
Sbjct: 118  QGDGGFVFDPQTIQKMEVLILGALNWRMRSITPFSFISFFISLFKPKDPPLR-------- 169

Query: 615  XXXXHQVLKERATEIIFKAQIESKLLGFKPSIVAASALLCASHELYPLQYQCFKNSISSC 436
                 Q LK RA EIIFKAQ +  LL F+PS+ AASALL A HEL+P+Q+ CF+ +IS C
Sbjct: 170  -----QALKARACEIIFKAQNDINLLEFRPSLTAASALLYACHELFPMQFLCFRKAISIC 224

Query: 435  SYVNEDDDLSKCYSVIQEVVMDGYES----VLSCKTPINVLDLDYSSSEDTNTKTTVPSE 268
            SYVN+ ++L +CY+ +QE  MDGY+S    V S  TP+NVLD  +SSSE  NT  TV   
Sbjct: 225  SYVNK-ENLLQCYNAMQETAMDGYKSQFDMVSSSDTPVNVLDRHFSSSESENTNGTVVMI 283

Query: 267  EE--------KRGLKRLKIS 232
                      ++G+KR KIS
Sbjct: 284  SSNGSNKTWPEKGIKRRKIS 303


>gb|AEV41137.1| D6-type cyclin [Populus x canadensis]
          Length = 324

 Score =  251 bits (641), Expect = 2e-64
 Identities = 155/333 (46%), Positives = 204/333 (61%), Gaps = 25/333 (7%)
 Frame = -2

Query: 1119 MEFDLENPLSK------DLQHSLFAMESDHLPFSN-----SDLDSDHHIRRQIISLI-ST 976
            M+F+LENPL+       D   SLF +ESDH+P  N      ++D D   RR+ IS +   
Sbjct: 1    MDFNLENPLTNSHELHFDTTPSLFLIESDHMPSKNYLKTLKEIDFDVSFRREAISSVFRV 60

Query: 975  FCHKLHHPFVSYLAINYLHRFLASNSIPDEKPWILKLVAVSCVSLAFKMISPDSRLSDHV 796
             C+    P +SYLA+NYL RFL+S  IP  KPW+LKL+AV+CVSLA KM   +  ++D +
Sbjct: 61   SCN--FDPSLSYLAVNYLDRFLSSQGIPQPKPWVLKLLAVACVSLAAKMKEAEFYVTD-I 117

Query: 795  QKDGDLMFDFGIVERMEFVILGALQWRMRSITPFAFIGFFVSFFKLKATSLXXXXXXXXX 616
            Q DG  +FD   +++ME +ILGAL WRMRSITPF+FI FF+S FK K   L         
Sbjct: 118  QGDGGFVFDPQTIQKMEVLILGALNWRMRSITPFSFISFFISLFKPKDPPLR-------- 169

Query: 615  XXXXHQVLKERATEIIFKAQIESKLLGFKPSIVAASALLCASHELYPLQYQCFKNSISSC 436
                 Q LK RA EIIFKAQ +  LL F+PS+ AASALL A HEL+P+Q+ CF+ +IS C
Sbjct: 170  -----QALKARACEIIFKAQNDINLLEFRPSLTAASALLYACHELFPMQFLCFRKAISIC 224

Query: 435  SYVNEDDDLSKCYSVIQEVVMDGYES----VLSCKTPINVLDLDYSSSEDTNTKTTVPSE 268
            S+VN+ ++L +CY+ +QE  MDGY+S    V S  TP+NVLD  + SSE  NT  TV   
Sbjct: 225  SHVNK-ENLLQCYNAMQETAMDGYKSQFDMVSSSDTPVNVLDRHFLSSESENTNGTVVMI 283

Query: 267  EE--------KRGLKRLKISTF-SKSPFQLS*F 196
                      ++ +KR KIS   +    QLS F
Sbjct: 284  SSDGSNKTWPEKDIKRRKISALCNNQTVQLSAF 316


>ref|XP_003526300.1| PREDICTED: putative cyclin-D6-1-like [Glycine max]
          Length = 329

 Score =  249 bits (635), Expect = 1e-63
 Identities = 159/343 (46%), Positives = 202/343 (58%), Gaps = 26/343 (7%)
 Frame = -2

Query: 1119 MEFDLENP---LSKDLQHSLFAMESDHLPFSNSDL-----DSDHHIRRQIISLISTFCHK 964
            MEFDLENP   L  D    LF +ESDH P  N        D D  +RR++ISLIS     
Sbjct: 1    MEFDLENPFENLHSDAVSYLFLIESDHTPSQNHSQTLKARDLDISVRRELISLISQLSCA 60

Query: 963  LHHPFVSYLAINYLHRFLASNSIPDEKPWILKLVAVSCVSLAFKMISPDSRLSDHV---- 796
            L  P +SYLAINYL RFLA+  I   KPW+L+L+AVSC+SLA KM+  +   +D      
Sbjct: 61   LD-PVLSYLAINYLDRFLANQGILQPKPWVLRLIAVSCISLAVKMMRTEYPFTDVQALLN 119

Query: 795  QKDGDLMFDFGIVERMEFVILGALQWRMRSITPFAFIGFFVSFFKLKATSLXXXXXXXXX 616
            Q DG ++F+   ++RME +ILGALQWRMRSITPF+F+ FF++   LK   +         
Sbjct: 120  QSDGGIIFETQTIQRMEALILGALQWRMRSITPFSFVAFFIALMGLKDLPMG-------- 171

Query: 615  XXXXHQVLKERATEIIFKAQIESKLLGFKPSIVAASALLCASHELYPLQYQCFKNSISSC 436
                 QVLK RA+EIIFK+Q E +L GFKPSI+AASALLCASHEL+P QY  F  +IS  
Sbjct: 172  -----QVLKNRASEIIFKSQREIRLWGFKPSIIAASALLCASHELFPFQYPSFLKAISDS 226

Query: 435  SYVNEDDDLSKCYSVIQEV-VMDGYESVL----SCKTPINVLDLDYSSSEDTNTK----- 286
            SYVN+ + + +CY VIQ++ + + Y S L    S  TPINVLD  + SSE   T      
Sbjct: 227  SYVNK-ESVEQCYKVIQDIAIEEEYSSALNGVSSSDTPINVLDHHFLSSESQKTNGITVA 285

Query: 285  TTVPSEEEKRGLKRLKISTF----SKSPFQLS*FQFSRERERE 169
             T+      R LKR KI+      +      S  QFS  +E E
Sbjct: 286  NTIAVSSPLRDLKRRKITGCGCGGNNPTIHNSRIQFSHAKESE 328


>ref|NP_001242717.1| uncharacterized protein LOC100799951 [Glycine max]
            gi|255634925|gb|ACU17821.1| unknown [Glycine max]
          Length = 316

 Score =  241 bits (615), Expect = 3e-61
 Identities = 148/321 (46%), Positives = 195/321 (60%), Gaps = 20/321 (6%)
 Frame = -2

Query: 1119 MEFDLENPLSK------DLQHSLFAMESDHLPFSN-----SDLDSDHHIRRQIISLISTF 973
            M+FDLENPL        D   SLF +ESDH+P  N        D D  +RR ++SLIS  
Sbjct: 1    MDFDLENPLGNFHDLPCDAVPSLFLIESDHIPPPNYCQSLKASDFDISVRRDVVSLISQL 60

Query: 972  CHKLHHPFVSYLAINYLHRFLASNSIPDEKPWILKLVAVSCVSLAFKMISPDSRLSDHVQ 793
                  P + YLAINYL RFLA+  I   KPW  KL+AVSC SLA KM+  +   +D VQ
Sbjct: 61   SCTFD-PVLPYLAINYLDRFLANQGILQPKPWANKLLAVSCFSLAAKMLKTEYSATD-VQ 118

Query: 792  K-----DGDLMFDFGIVERMEFVILGALQWRMRSITPFAFIGFFVSFFKLKATSLXXXXX 628
                  DG  +F+   ++RME ++LGALQWRMRSITPF+FI FFV+ F+LK  +L     
Sbjct: 119  VLMNHGDGGAIFETQTIQRMEGIVLGALQWRMRSITPFSFIPFFVNLFRLKDPALR---- 174

Query: 627  XXXXXXXXHQVLKERATEIIFKAQIESKLLGFKPSIVAASALLCASHELYPLQYQCFKNS 448
                     QVLK+RA+EII K+Q E K+L FKPS VAASALL ASHEL+P QY CF  +
Sbjct: 175  ---------QVLKDRASEIILKSQREIKVLEFKPSTVAASALLYASHELFPFQYPCFLRA 225

Query: 447  ISSCSYVNEDDDLSKCYSVIQEVVMDGYESVLSCK----TPINVLDLDYSSSEDTNTKTT 280
            IS CSY+N+ + + +CY+VIQ++  + Y+SVL+      TP+NVLD  + S E   T  T
Sbjct: 226  ISDCSYINK-ETVVQCYNVIQDIAREEYKSVLNINSTSDTPVNVLDEHFLSLESEKTNGT 284

Query: 279  VPSEEEKRGLKRLKISTFSKS 217
                 +++  KR K + +  +
Sbjct: 285  NVVVTQEQDFKRRKTTDYGNN 305


>ref|XP_003540877.1| PREDICTED: putative cyclin-D6-1-like [Glycine max]
          Length = 324

 Score =  241 bits (614), Expect = 3e-61
 Identities = 153/317 (48%), Positives = 197/317 (62%), Gaps = 21/317 (6%)
 Frame = -2

Query: 1119 MEFDLENPL----SKDLQHSLFAMESDHLPFSNSDL-----DSDHHIRRQIISLISTFCH 967
            MEFDLENPL    S D+ + LF +ESDH P  N        D D  +RR++ISLIS    
Sbjct: 1    MEFDLENPLENLHSDDVSY-LFLIESDHTPSQNHSQTLKARDLDISVRRELISLISQLSC 59

Query: 966  KLHHPFVSYLAINYLHRFLASNSIPDEKPWILKLVAVSCVSLAFKMISPDSRLSDHV--- 796
             L  P +SYLAINYL RFL +  I   KPW L+LVAVSC+SL  KM+  +   +D     
Sbjct: 60   ALD-PVLSYLAINYLDRFLTNQGILQPKPWALRLVAVSCISLTVKMMGTEYPATDIQALL 118

Query: 795  -QKDGDLMFDFGIVERMEFVILGALQWRMRSITPFAFIGFFVSFFKLKATSLXXXXXXXX 619
             Q DG ++F+   ++RME +ILGALQWRMRSITPF+F+ FF++   LK + +        
Sbjct: 119  NQSDGGIIFETQTIQRMEALILGALQWRMRSITPFSFVAFFIALMGLKESPMG------- 171

Query: 618  XXXXXHQVLKERATEIIFKAQIESKLLGFKPSIVAASALLCASHELYPLQYQCFKNSISS 439
                  QVLK RA+EIIFK+Q E +L GFKPSI+AASALLCASHEL+P QY  F  +IS 
Sbjct: 172  ------QVLKNRASEIIFKSQREIRLWGFKPSIIAASALLCASHELFPFQYPFFLKAISD 225

Query: 438  CSYVNEDDDLSKCYSVIQEV-VMDGYESVLS----CKTPINVLDLDY--SSSEDTNTKTT 280
             SYVN+ + + +CY VIQ++ + + Y S L+      TPINVLD  +  S SE TN  T 
Sbjct: 226  SSYVNK-EIVEQCYKVIQDIAIEEEYSSALNGVSRSDTPINVLDHHFLSSESEKTNGITV 284

Query: 279  VPSEEEKRG-LKRLKIS 232
              + +   G LKR KI+
Sbjct: 285  ANATDSPLGDLKRRKIT 301


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