BLASTX nr result

ID: Atractylodes22_contig00024332 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00024332
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308298.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08

>ref|XP_002308298.1| predicted protein [Populus trichocarpa] gi|222854274|gb|EEE91821.1|
           predicted protein [Populus trichocarpa]
          Length = 282

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 39/94 (41%), Positives = 53/94 (56%)
 Frame = -2

Query: 290 HNSRHDSQGQLVRSPSLLERVRSVNLSSFYTTPESRDHYGVQSETTEFNSVGQLSRAPSL 111
           HN        L R+PSLL+RV+S++  SFY  P +++       TT+ +   QL RAPSL
Sbjct: 38  HNKPVHEYQHLARAPSLLQRVKSIDYFSFYNFPPAQE----PQNTTQEHDPPQLERAPSL 93

Query: 110 LERVKSFDLSFSSFYATPVDQSHDESEQTRHDSP 9
           L+RVKS D  + SFY  P  Q  + + Q  HD P
Sbjct: 94  LQRVKSID--YLSFYKFPPAQEPENTTQ-EHDPP 124



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 39/96 (40%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
 Frame = -2

Query: 293 PHNS--RHDSQGQLVRSPSLLERVRSVNLSSFYTTPESRDHYGVQSETTEFNSVGQLSRA 120
           P N+   HD   QL R+PSLL+RV+S++  SFY  P +++       TT+ +   QL RA
Sbjct: 75  PQNTTQEHDPP-QLERAPSLLQRVKSIDYLSFYKFPPAQE----PENTTQEHDPPQLERA 129

Query: 119 PSLLERVKSFDLSFSSFYATPVDQSHDESEQTRHDS 12
           PSLLERVKS + S   + + P + +     QTR D+
Sbjct: 130 PSLLERVKSINFSSLYYSSGPEETTQRLPAQTRSDA 165


Top