BLASTX nr result

ID: Atractylodes22_contig00024316 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00024316
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332333.1| predicted protein [Populus trichocarpa] gi|2...   130   9e-29
ref|XP_002511032.1| ATP-dependent DNA helicase pcrA, putative [R...   129   2e-28
ref|XP_002277737.2| PREDICTED: ATP-dependent DNA helicase pcrA-l...   124   1e-26
ref|XP_004158147.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependen...   119   2e-25
ref|XP_004143728.1| PREDICTED: ATP-dependent DNA helicase PcrA-l...   119   2e-25

>ref|XP_002332333.1| predicted protein [Populus trichocarpa] gi|222832580|gb|EEE71057.1|
            predicted protein [Populus trichocarpa]
          Length = 1056

 Score =  130 bits (328), Expect = 9e-29
 Identities = 66/95 (69%), Positives = 75/95 (78%)
 Frame = -3

Query: 285  NLFDEDSKESDETILPCNGNNFLKRFSSEERATVSHLFHQWAKKAAFKEPKRLLDKVAFV 106
            N  +E SKES ETI   NGN FL+RF+ EER+ +SHLFHQWAKK AF+ PKRLL+KV FV
Sbjct: 893  NQINEASKESLETIDSYNGNIFLRRFAVEERSVISHLFHQWAKKQAFQNPKRLLNKVGFV 952

Query: 105  IDERLRAKKTAQKDVLRSLKSCLKSDEAFQYAENV 1
            IDERLR +K   KDVLR+LKSCL  DEAFQYAE V
Sbjct: 953  IDERLRVEKNKHKDVLRALKSCLSCDEAFQYAEYV 987


>ref|XP_002511032.1| ATP-dependent DNA helicase pcrA, putative [Ricinus communis]
            gi|223550147|gb|EEF51634.1| ATP-dependent DNA helicase
            pcrA, putative [Ricinus communis]
          Length = 1089

 Score =  129 bits (325), Expect = 2e-28
 Identities = 62/90 (68%), Positives = 72/90 (80%)
 Frame = -3

Query: 276  DEDSKESDETILPCNGNNFLKRFSSEERATVSHLFHQWAKKAAFKEPKRLLDKVAFVIDE 97
            + D KES + +  CNGN+FLKRF+  +R+ VSHLFHQWAKK AF+ PKRLLDKV FVIDE
Sbjct: 929  NNDLKESKDPVDVCNGNSFLKRFAVVDRSVVSHLFHQWAKKQAFQNPKRLLDKVGFVIDE 988

Query: 96   RLRAKKTAQKDVLRSLKSCLKSDEAFQYAE 7
            RLR KK   KDVLR+LK+CL  DEAFQYAE
Sbjct: 989  RLRIKKNKHKDVLRALKACLSCDEAFQYAE 1018


>ref|XP_002277737.2| PREDICTED: ATP-dependent DNA helicase pcrA-like [Vitis vinifera]
          Length = 1113

 Score =  124 bits (310), Expect = 1e-26
 Identities = 60/92 (65%), Positives = 70/92 (76%)
 Frame = -3

Query: 276  DEDSKESDETILPCNGNNFLKRFSSEERATVSHLFHQWAKKAAFKEPKRLLDKVAFVIDE 97
            DE SKE+ E +  C+GN+FL+RF+ E+R+ VSHLFH WAKK AF+EPKRLLDKV F IDE
Sbjct: 953  DECSKETTEPMGSCDGNSFLRRFNVEDRSVVSHLFHHWAKKQAFQEPKRLLDKVGFAIDE 1012

Query: 96   RLRAKKTAQKDVLRSLKSCLKSDEAFQYAENV 1
            RLR  K   KD LR LKS LK DEAF YAE +
Sbjct: 1013 RLRVTKNKHKDALRELKSSLKCDEAFHYAEYI 1044


>ref|XP_004158147.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase PcrA-like
            [Cucumis sativus]
          Length = 1129

 Score =  119 bits (299), Expect = 2e-25
 Identities = 59/90 (65%), Positives = 70/90 (77%)
 Frame = -3

Query: 270  DSKESDETILPCNGNNFLKRFSSEERATVSHLFHQWAKKAAFKEPKRLLDKVAFVIDERL 91
            D ++ +E I   NGNNFLKRF  + RA +SHLFHQWAKK AF++PKRL+DKV FVI+ERL
Sbjct: 971  DIRDFEEPIEITNGNNFLKRFDVDNRAVISHLFHQWAKKKAFQDPKRLIDKVGFVIEERL 1030

Query: 90   RAKKTAQKDVLRSLKSCLKSDEAFQYAENV 1
            R KK   K+VLRSLKS L S+EA QYAE V
Sbjct: 1031 RVKKCKTKEVLRSLKSSLTSNEALQYAEYV 1060


>ref|XP_004143728.1| PREDICTED: ATP-dependent DNA helicase PcrA-like [Cucumis sativus]
          Length = 1105

 Score =  119 bits (299), Expect = 2e-25
 Identities = 59/90 (65%), Positives = 70/90 (77%)
 Frame = -3

Query: 270  DSKESDETILPCNGNNFLKRFSSEERATVSHLFHQWAKKAAFKEPKRLLDKVAFVIDERL 91
            D ++ +E I   NGNNFLKRF  + RA +SHLFHQWAKK AF++PKRL+DKV FVI+ERL
Sbjct: 947  DIRDFEEPIEITNGNNFLKRFDVDNRAVISHLFHQWAKKKAFQDPKRLIDKVGFVIEERL 1006

Query: 90   RAKKTAQKDVLRSLKSCLKSDEAFQYAENV 1
            R KK   K+VLRSLKS L S+EA QYAE V
Sbjct: 1007 RVKKCKTKEVLRSLKSSLTSNEALQYAEYV 1036


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