BLASTX nr result

ID: Atractylodes22_contig00024306 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00024306
         (693 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518941.1| hypothetical protein RCOM_1314350 [Ricinus c...    97   2e-18
ref|XP_002317051.1| predicted protein [Populus trichocarpa] gi|2...    89   8e-16
gb|ABK96609.1| unknown [Populus trichocarpa x Populus deltoides]       89   8e-16
ref|XP_002300512.1| predicted protein [Populus trichocarpa] gi|2...    82   1e-13
ref|NP_001061030.1| Os08g0157400 [Oryza sativa Japonica Group] g...    80   3e-13

>ref|XP_002518941.1| hypothetical protein RCOM_1314350 [Ricinus communis]
           gi|223541928|gb|EEF43474.1| hypothetical protein
           RCOM_1314350 [Ricinus communis]
          Length = 274

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 53/135 (39%), Positives = 72/135 (53%), Gaps = 2/135 (1%)
 Frame = +2

Query: 293 SLILAALSHLGLFKSXXXXXXYTSSSGNYVLILDGXXXXXXXXXXXXXXXXXXXXXXXVV 472
           ++ + AL+HL L K           + +YVL+++                        V+
Sbjct: 27  TVFIVALTHLRLLKPPQQAYTREEEANDYVLVIN------------RLCPIPVSVPIDVL 74

Query: 473 TASIKNKVPIIPYSDFAHRFGGIDKAVCT--VCLDSIHYNNPIRELLNCKHVFHRECLDR 646
           TA +K ++ +  +S    R G  +  VC   VCLDSI+  + IREL NC HVFH+ECLD 
Sbjct: 75  TALVKKRLVVRKFSSILSRLGKDEDEVCMCPVCLDSINKTHEIRELCNCAHVFHKECLDT 134

Query: 647 WVDEGQVTCPLCRSM 691
           WVDEGQVTCPLCRSM
Sbjct: 135 WVDEGQVTCPLCRSM 149


>ref|XP_002317051.1| predicted protein [Populus trichocarpa] gi|222860116|gb|EEE97663.1|
           predicted protein [Populus trichocarpa]
          Length = 180

 Score = 89.0 bits (219), Expect = 8e-16
 Identities = 39/78 (50%), Positives = 53/78 (67%), Gaps = 3/78 (3%)
 Frame = +2

Query: 467 VVTASIKNKVPIIPYSDFAHRFGGID---KAVCTVCLDSIHYNNPIRELLNCKHVFHREC 637
           V+T  IK K+P++ +S    R   ++   +++C VCLD I   + +REL NC HVFH +C
Sbjct: 77  VLTRLIKKKLPVMAFSSLLERLVKLEDDQESMCPVCLDCIQERDEVRELCNCSHVFHMKC 136

Query: 638 LDRWVDEGQVTCPLCRSM 691
           LD WVD+GQVTCP CRSM
Sbjct: 137 LDSWVDQGQVTCPTCRSM 154


>gb|ABK96609.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 180

 Score = 89.0 bits (219), Expect = 8e-16
 Identities = 39/78 (50%), Positives = 53/78 (67%), Gaps = 3/78 (3%)
 Frame = +2

Query: 467 VVTASIKNKVPIIPYSDFAHRFGGID---KAVCTVCLDSIHYNNPIRELLNCKHVFHREC 637
           V+T  IK K+P++ +S    R   ++   +++C VCLD I   + +REL NC HVFH +C
Sbjct: 77  VLTRLIKKKLPVMAFSSLLERLVKLEDDQESMCPVCLDCIQERDEVRELCNCSHVFHMKC 136

Query: 638 LDRWVDEGQVTCPLCRSM 691
           LD WVD+GQVTCP CRSM
Sbjct: 137 LDSWVDQGQVTCPTCRSM 154


>ref|XP_002300512.1| predicted protein [Populus trichocarpa] gi|222847770|gb|EEE85317.1|
           predicted protein [Populus trichocarpa]
          Length = 181

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 36/73 (49%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
 Frame = +2

Query: 482 IKNKVPIIPYSDFAHRFGGID---KAVCTVCLDSIHYNNPIRELLNCKHVFHRECLDRWV 652
           IK K+ +I YS    R G ++   +++C VCLD I   + +RE  NC HVFH +CLD WV
Sbjct: 83  IKKKLKVIAYSSLLERSGKLEDDQESICPVCLDCIEGRDEVREPCNCSHVFHLKCLDSWV 142

Query: 653 DEGQVTCPLCRSM 691
           D+  VTCP CRSM
Sbjct: 143 DQAHVTCPTCRSM 155


>ref|NP_001061030.1| Os08g0157400 [Oryza sativa Japonica Group]
           gi|37805860|dbj|BAC99511.1| unknown protein [Oryza
           sativa Japonica Group] gi|113622999|dbj|BAF22944.1|
           Os08g0157400 [Oryza sativa Japonica Group]
           gi|149392499|gb|ABR26052.1| ring zinc finger
           protein-like [Oryza sativa Indica Group]
           gi|215766069|dbj|BAG98297.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 176

 Score = 80.5 bits (197), Expect = 3e-13
 Identities = 34/73 (46%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
 Frame = +2

Query: 476 ASIKNKVPIIPYSDFAH--RFGGIDKAVCTVCLDSIHYNNPIRELLNCKHVFHRECLDRW 649
           A+IK ++P + Y+DF    R      A C VCL ++   + +REL NC H FH+ C+D+W
Sbjct: 79  AAIKARLPAVRYADFVRCRRAAAAAAASCVVCLGALEARHRVRELGNCAHAFHKACIDKW 138

Query: 650 VDEGQVTCPLCRS 688
           VD+GQ TCPLCR+
Sbjct: 139 VDKGQATCPLCRA 151


Top