BLASTX nr result

ID: Atractylodes22_contig00024274 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00024274
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326280.1| predicted protein [Populus trichocarpa] gi|2...   205   3e-51
ref|XP_004141069.1| PREDICTED: mediator of RNA polymerase II tra...   203   1e-50
ref|XP_002516976.1| conserved hypothetical protein [Ricinus comm...   201   5e-50
ref|XP_002279553.1| PREDICTED: putative mediator of RNA polymera...   199   1e-49
ref|XP_002879109.1| hypothetical protein ARALYDRAFT_481687 [Arab...   198   3e-49

>ref|XP_002326280.1| predicted protein [Populus trichocarpa] gi|222833473|gb|EEE71950.1|
           predicted protein [Populus trichocarpa]
          Length = 221

 Score =  205 bits (522), Expect = 3e-51
 Identities = 95/119 (79%), Positives = 113/119 (94%)
 Frame = -1

Query: 358 WQPNAGHTVSSQILAEVSQCVESINGVKEGKWKATLSFYRPVLKEQANAAEFPRDFLGIS 179
           WQPNAG TV++QIL EV+QCVESINGVKEG+WKAT+++Y+P+L++Q+ A E PRDFLGIS
Sbjct: 9   WQPNAGTTVNTQILNEVTQCVESINGVKEGRWKATVTYYKPILRDQSQAPELPRDFLGIS 68

Query: 178 LPEQPSKYYFVLRGQRLVLEADSTIQTIMEKLQSYKTRVALNFEGFQYQLGDFQLRVGK 2
           LPEQP+KYYF++RGQR+VLEADS+IQTIMEKLQSYK+RVAL FEGFQYQLGDFQLRVGK
Sbjct: 69  LPEQPNKYYFIIRGQRIVLEADSSIQTIMEKLQSYKSRVALYFEGFQYQLGDFQLRVGK 127


>ref|XP_004141069.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           20a-like [Cucumis sativus]
           gi|449488087|ref|XP_004157936.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 20a-like
           [Cucumis sativus]
          Length = 223

 Score =  203 bits (516), Expect = 1e-50
 Identities = 99/120 (82%), Positives = 111/120 (92%), Gaps = 1/120 (0%)
 Frame = -1

Query: 358 WQPNAGHTVSSQILAEVSQCVESINGVKEGKWKATLSFYRPVLKEQAN-AAEFPRDFLGI 182
           WQPNAG TV+SQIL EVSQCVESI+GVK GKWKATL+FY+P+L++Q + AAEFPRDFLGI
Sbjct: 9   WQPNAGSTVNSQILNEVSQCVESIHGVKGGKWKATLTFYKPILRDQNSPAAEFPRDFLGI 68

Query: 181 SLPEQPSKYYFVLRGQRLVLEADSTIQTIMEKLQSYKTRVALNFEGFQYQLGDFQLRVGK 2
           SLPEQP+KYY ++RGQR+VLEAD TIQ IMEKLQSYK RVALNFEGFQYQLGDFQLRVGK
Sbjct: 69  SLPEQPNKYYLIIRGQRIVLEADFTIQAIMEKLQSYKLRVALNFEGFQYQLGDFQLRVGK 128


>ref|XP_002516976.1| conserved hypothetical protein [Ricinus communis]
           gi|223544064|gb|EEF45590.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 221

 Score =  201 bits (511), Expect = 5e-50
 Identities = 96/119 (80%), Positives = 111/119 (93%)
 Frame = -1

Query: 358 WQPNAGHTVSSQILAEVSQCVESINGVKEGKWKATLSFYRPVLKEQANAAEFPRDFLGIS 179
           WQPNAG TV++QIL EVSQCVESINGVKEG+WKA L+ Y+P+L++Q+   EFPRDFLGIS
Sbjct: 9   WQPNAGTTVNTQILNEVSQCVESINGVKEGRWKAALTSYKPMLRDQSLTPEFPRDFLGIS 68

Query: 178 LPEQPSKYYFVLRGQRLVLEADSTIQTIMEKLQSYKTRVALNFEGFQYQLGDFQLRVGK 2
           LPEQP+KYYF++RGQRLV+EADS+IQTIMEKLQSYK+RVAL FEGFQYQLGDFQLRVGK
Sbjct: 69  LPEQPNKYYFMIRGQRLVVEADSSIQTIMEKLQSYKSRVALLFEGFQYQLGDFQLRVGK 127


>ref|XP_002279553.1| PREDICTED: putative mediator of RNA polymerase II transcription
           subunit 20-like [Vitis vinifera]
          Length = 222

 Score =  199 bits (507), Expect = 1e-49
 Identities = 92/119 (77%), Positives = 111/119 (93%)
 Frame = -1

Query: 358 WQPNAGHTVSSQILAEVSQCVESINGVKEGKWKATLSFYRPVLKEQANAAEFPRDFLGIS 179
           WQPNAG TV+SQ++ EVSQCVESINGVKEG+WKATL+FY+P+ ++QA  AE+PRDFLGIS
Sbjct: 9   WQPNAGTTVNSQMINEVSQCVESINGVKEGRWKATLTFYKPMFRDQAVPAEYPRDFLGIS 68

Query: 178 LPEQPSKYYFVLRGQRLVLEADSTIQTIMEKLQSYKTRVALNFEGFQYQLGDFQLRVGK 2
           LPEQP++YYF++R Q++VLEADS+IQ IMEKLQSYK+RV+L FEGFQYQLGDFQLRVGK
Sbjct: 69  LPEQPNRYYFIIRSQKIVLEADSSIQMIMEKLQSYKSRVSLTFEGFQYQLGDFQLRVGK 127


>ref|XP_002879109.1| hypothetical protein ARALYDRAFT_481687 [Arabidopsis lyrata subsp.
           lyrata] gi|297324948|gb|EFH55368.1| hypothetical protein
           ARALYDRAFT_481687 [Arabidopsis lyrata subsp. lyrata]
          Length = 219

 Score =  198 bits (504), Expect = 3e-49
 Identities = 92/119 (77%), Positives = 111/119 (93%)
 Frame = -1

Query: 358 WQPNAGHTVSSQILAEVSQCVESINGVKEGKWKATLSFYRPVLKEQANAAEFPRDFLGIS 179
           WQPN G TVSSQIL EV+QCVESINGVKEG+WKATL++Y+P+L++QAN +EFPRDFLGIS
Sbjct: 9   WQPNQGSTVSSQILNEVTQCVESINGVKEGRWKATLNYYKPMLRDQANQSEFPRDFLGIS 68

Query: 178 LPEQPSKYYFVLRGQRLVLEADSTIQTIMEKLQSYKTRVALNFEGFQYQLGDFQLRVGK 2
           L +QP+KYYF++R QR+VLEADS+IQ IMEKLQSYK++VAL F+GFQYQLGDF+LRVGK
Sbjct: 69  LADQPNKYYFIIRSQRIVLEADSSIQLIMEKLQSYKSKVALYFDGFQYQLGDFRLRVGK 127


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