BLASTX nr result

ID: Atractylodes22_contig00024265 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00024265
         (238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEL98677.1| clathrin assembly protein, partial [Silene latifo...    93   2e-17
gb|AEL98678.1| clathrin assembly protein, partial [Silene latifo...    91   1e-16
gb|AEW69791.1| Hop-interacting protein THI028 [Solanum lycopersi...    87   2e-15
ref|XP_002527787.1| clathrin assembly protein, putative [Ricinus...    84   9e-15
ref|XP_002441469.1| hypothetical protein SORBIDRAFT_09g027370 [S...    78   7e-13

>gb|AEL98677.1| clathrin assembly protein, partial [Silene latifolia]
          Length = 556

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 46/77 (59%), Positives = 58/77 (75%)
 Frame = +3

Query: 3   EPPQSFLATMEEYIREAPRLVAGPTQPLEFPERLMLTYKPEEDTSPHEDTDSPVDEPKPV 182
           EPPQSFLATMEEYIREAP +V  P+Q LEFPERL LTYKPEED S  ED +  +DEP+P+
Sbjct: 293 EPPQSFLATMEEYIREAPSVVLVPSQQLEFPERLQLTYKPEEDYS-EEDGNVFIDEPQPM 351

Query: 183 LTDDFTASNDVPEPTHP 233
            +DD +++ +    + P
Sbjct: 352 TSDDLSSTAETAPASQP 368


>gb|AEL98678.1| clathrin assembly protein, partial [Silene latifolia]
          Length = 556

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 45/77 (58%), Positives = 57/77 (74%)
 Frame = +3

Query: 3   EPPQSFLATMEEYIREAPRLVAGPTQPLEFPERLMLTYKPEEDTSPHEDTDSPVDEPKPV 182
           EPPQSFLATMEEYIREA  +V  P+Q LEFPERL LTYKPEED S  ED +  +DEP+P+
Sbjct: 293 EPPQSFLATMEEYIREARSVVLVPSQQLEFPERLQLTYKPEEDYS-EEDGNVSIDEPQPM 351

Query: 183 LTDDFTASNDVPEPTHP 233
            +DD +++ +    + P
Sbjct: 352 TSDDLSSTAETAPASQP 368


>gb|AEW69791.1| Hop-interacting protein THI028 [Solanum lycopersicum]
          Length = 563

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 44/80 (55%), Positives = 55/80 (68%), Gaps = 2/80 (2%)
 Frame = +3

Query: 3   EPPQSFLATMEEYIREAPRLVAGPTQPLEFPERLMLTYKPEEDTSPHEDT-DSPVDEPKP 179
           EPPQSFL TMEEYI+EAPR+V+ P + L++PERLMLTYK E++ S  ED  DS  + P P
Sbjct: 294 EPPQSFLVTMEEYIKEAPRIVSVPIETLDYPERLMLTYKQEDEPSASEDAQDSANETPPP 353

Query: 180 VLTDDFTAS-NDVPEPTHPP 236
           +  DD   S  + P P  PP
Sbjct: 354 LPLDDAVVSTTEAPSPPMPP 373


>ref|XP_002527787.1| clathrin assembly protein, putative [Ricinus communis]
           gi|223532822|gb|EEF34597.1| clathrin assembly protein,
           putative [Ricinus communis]
          Length = 567

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 43/78 (55%), Positives = 52/78 (66%)
 Frame = +3

Query: 3   EPPQSFLATMEEYIREAPRLVAGPTQPLEFPERLMLTYKPEEDTSPHEDTDSPVDEPKPV 182
           EPPQSFL TMEEYIREAPR+V  P++PL     L LTY+PEE  S  EDT  P+DEP+ V
Sbjct: 294 EPPQSFLTTMEEYIREAPRVVTVPSEPL-----LQLTYRPEEGPSEPEDTKLPIDEPESV 348

Query: 183 LTDDFTASNDVPEPTHPP 236
            ++D   +N    P  PP
Sbjct: 349 PSEDVAIANAEVAPPTPP 366


>ref|XP_002441469.1| hypothetical protein SORBIDRAFT_09g027370 [Sorghum bicolor]
           gi|241946754|gb|EES19899.1| hypothetical protein
           SORBIDRAFT_09g027370 [Sorghum bicolor]
          Length = 564

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 39/65 (60%), Positives = 50/65 (76%), Gaps = 5/65 (7%)
 Frame = +3

Query: 3   EPPQSFLATMEEYIREAPRLVAGPTQPLEFPERLMLTYKPEE-----DTSPHEDTDSPVD 167
           EPPQ+FLATMEEY++EAPR+V    +PLE PERL+LTYKPEE     + +P E+  +PV+
Sbjct: 294 EPPQTFLATMEEYVKEAPRMVP-VREPLELPERLLLTYKPEESEEIPEPAPVEEEKAPVE 352

Query: 168 EPKPV 182
           EP PV
Sbjct: 353 EPVPV 357


Top