BLASTX nr result

ID: Atractylodes22_contig00024217 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00024217
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301045.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
emb|CAN67718.1| hypothetical protein VITISV_002357 [Vitis vinifera]    58   9e-07

>ref|XP_002301045.1| predicted protein [Populus trichocarpa] gi|222842771|gb|EEE80318.1|
           predicted protein [Populus trichocarpa]
          Length = 423

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 7/82 (8%)
 Frame = -3

Query: 235 VLTTDTTNFRQMVQEFTGIXXXXXXXXXXXXXPYSRRLDLYGSGTA-------PLHPLRP 77
           VLTTDT+NFRQMVQEFTGI             P++RRLDL+G G+        PL+PLRP
Sbjct: 155 VLTTDTSNFRQMVQEFTGI-----PAPPFSGSPFTRRLDLFGPGSGLRSGHLEPLYPLRP 209

Query: 76  SAXXXXXXQPSFLNSTTATTSN 11
           +A      Q  FL+S+  +  N
Sbjct: 210 TAQKVHHQQTPFLSSSFPSLLN 231


>emb|CAN67718.1| hypothetical protein VITISV_002357 [Vitis vinifera]
          Length = 449

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 40/88 (45%), Positives = 46/88 (52%), Gaps = 19/88 (21%)
 Frame = -3

Query: 235 VLTTDTTNFRQMVQEFTGIXXXXXXXXXXXXXPYSRRLDLYGSGTA----------PLHP 86
           VLTTDT+NFR MVQEFTGI             PYSRRLDL+G+G++          PL+P
Sbjct: 163 VLTTDTSNFRAMVQEFTGI-----PAPPFSASPYSRRLDLFGAGSSIKPGHLEPLGPLYP 217

Query: 85  LRPS---------AXXXXXXQPSFLNST 29
           LRPS                 PSF NST
Sbjct: 218 LRPSPHKVQPNLFVSSSSSPSPSFFNST 245


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