BLASTX nr result

ID: Atractylodes22_contig00024194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00024194
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145747.1| PREDICTED: uncharacterized membrane protein ...    56   3e-06
ref|XP_003543477.1| PREDICTED: uncharacterized membrane protein ...    55   6e-06
ref|XP_003540188.1| PREDICTED: uncharacterized membrane protein ...    55   6e-06
gb|ACU17916.1| unknown [Glycine max]                                   55   6e-06
ref|XP_003597262.1| Membrane protein, putative [Medicago truncat...    54   1e-05

>ref|XP_004145747.1| PREDICTED: uncharacterized membrane protein At1g06890-like [Cucumis
           sativus] gi|449524366|ref|XP_004169194.1| PREDICTED:
           uncharacterized membrane protein At1g06890-like [Cucumis
           sativus]
          Length = 344

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/30 (80%), Positives = 29/30 (96%)
 Frame = -3

Query: 110 SVYMFGMLNGVSIGFLNLSLGFNSIGFYQV 21
           +V +FGMLNG+SIGFLNLSLGFNS+GFYQ+
Sbjct: 74  TVVLFGMLNGISIGFLNLSLGFNSVGFYQM 103


>ref|XP_003543477.1| PREDICTED: uncharacterized membrane protein At1g06890-like [Glycine
           max]
          Length = 349

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/30 (80%), Positives = 29/30 (96%)
 Frame = -3

Query: 110 SVYMFGMLNGVSIGFLNLSLGFNSIGFYQV 21
           +V +FG+LNG+SIGFLNLSLGFNSIGFYQ+
Sbjct: 74  TVMLFGILNGISIGFLNLSLGFNSIGFYQM 103


>ref|XP_003540188.1| PREDICTED: uncharacterized membrane protein At1g06890-like [Glycine
           max]
          Length = 349

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/30 (80%), Positives = 29/30 (96%)
 Frame = -3

Query: 110 SVYMFGMLNGVSIGFLNLSLGFNSIGFYQV 21
           +V +FG+LNG+SIGFLNLSLGFNSIGFYQ+
Sbjct: 74  TVMLFGILNGISIGFLNLSLGFNSIGFYQM 103


>gb|ACU17916.1| unknown [Glycine max]
          Length = 196

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/30 (80%), Positives = 29/30 (96%)
 Frame = -3

Query: 110 SVYMFGMLNGVSIGFLNLSLGFNSIGFYQV 21
           +V +FG+LNG+SIGFLNLSLGFNSIGFYQ+
Sbjct: 74  TVMLFGILNGISIGFLNLSLGFNSIGFYQM 103


>ref|XP_003597262.1| Membrane protein, putative [Medicago truncatula]
           gi|355486310|gb|AES67513.1| Membrane protein, putative
           [Medicago truncatula]
          Length = 354

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 23/30 (76%), Positives = 28/30 (93%)
 Frame = -3

Query: 110 SVYMFGMLNGVSIGFLNLSLGFNSIGFYQV 21
           ++ +FG LNGVSIGFLNLSLGFNS+GFYQ+
Sbjct: 74  TIMLFGFLNGVSIGFLNLSLGFNSVGFYQM 103


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